| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yfgM [H]
Identifier: 77460820
GI number: 77460820
Start: 5200612
End: 5201253
Strand: Reverse
Name: yfgM [H]
Synonym: Pfl01_4599
Alternate gene names: 77460820
Gene position: 5201253-5200612 (Counterclockwise)
Preceding gene: 77460821
Following gene: 77460819
Centisome position: 80.78
GC content: 62.31
Gene sequence:
>642_bases GTGTCGAGTACCGAAGACGAACAGTTGGCGGATTTGAAGGACTGGTGGACACGCAACGGCAAACCTCTGGTCACCGGCGG CCTGTTGGCGCTGGTCATCGTGTTCGGCTGGCAGGCTTATCACAAGTATCAGAGCAACCAGTCGCAAGGCGCCTCGGTGC TCTATCAGCAATTGCTGGAAACCACGCTGACCCCGGACGGCAAGCCTGACGCCGCGCGCGTTGCGGATCTGGCCGGCAAG CTCAACAGCGAATTCGGCGGTTCTGCCTACGCGCAGTACGGCAGCCTGTTCGTGGCCAAGGTAGCGGTCGACAGCGGCAA GCTGGACGACGCGGCGACCGAACTCAAGGCCATCGTTGCCAAACCGGCCAACCCGGCGCTGGGCGAAATCGCCCGTCAGC GTCTGGCGCAGGTACTGGGCGCACAGAACAAGGCCGACGAAGCCCTGAAACTGCTCGAAGGCGATGCCGACAAGTCGTTC CTGGCCACTCGCGAAGAACTCAAGGGCGACCTGCTGGTACAGCTGGGCCGTACCGACGAAGCGAACGCGGCGTATCAAAA AGCCAAGGCAGCACTGTCGGATGAAGCGGCGGTCGGTGGCCTTCAAATCAAGCTGGACGACCTGGCCAAAGGGGATGCGT GA
Upstream 100 bases:
>100_bases AAAGCATTGCCTGGGATGCGCTCGCTGCACACCTGGCCACCTGCGTCGTGCAGGGTTGAAGCTGTCCAAACAGCCGATTT AGCGATTAAGGAGTATTGGG
Downstream 100 bases:
>100_bases CGTGATCCGTTGGAAGCATGCAGCATTGCTGGCTCTGGCCATTCTGGCCGCGGGTTGCAGCAGCAACAGCAAAAAAGAAC TGCCACCGGCCGAGCTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSSTEDEQLADLKDWWTRNGKPLVTGGLLALVIVFGWQAYHKYQSNQSQGASVLYQQLLETTLTPDGKPDAARVADLAGK LNSEFGGSAYAQYGSLFVAKVAVDSGKLDDAATELKAIVAKPANPALGEIARQRLAQVLGAQNKADEALKLLEGDADKSF LATREELKGDLLVQLGRTDEANAAYQKAKAALSDEAAVGGLQIKLDDLAKGDA
Sequences:
>Translated_213_residues MSSTEDEQLADLKDWWTRNGKPLVTGGLLALVIVFGWQAYHKYQSNQSQGASVLYQQLLETTLTPDGKPDAARVADLAGK LNSEFGGSAYAQYGSLFVAKVAVDSGKLDDAATELKAIVAKPANPALGEIARQRLAQVLGAQNKADEALKLLEGDADKSF LATREELKGDLLVQLGRTDEANAAYQKAKAALSDEAAVGGLQIKLDDLAKGDA >Mature_212_residues SSTEDEQLADLKDWWTRNGKPLVTGGLLALVIVFGWQAYHKYQSNQSQGASVLYQQLLETTLTPDGKPDAARVADLAGKL NSEFGGSAYAQYGSLFVAKVAVDSGKLDDAATELKAIVAKPANPALGEIARQRLAQVLGAQNKADEALKLLEGDADKSFL ATREELKGDLLVQLGRTDEANAAYQKAKAALSDEAAVGGLQIKLDDLAKGDA
Specific function: Unknown
COG id: COG2976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0070 family [H]
Homologues:
Organism=Escherichia coli, GI1788860, Length=206, Percent_Identity=27.6699029126214, Blast_Score=71, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018704 - InterPro: IPR011990 [H]
Pfam domain/function: PF09976 DUF2133 [H]
EC number: NA
Molecular weight: Translated: 22591; Mature: 22459
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTEDEQLADLKDWWTRNGKPLVTGGLLALVIVFGWQAYHKYQSNQSQGASVLYQQLLE CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH TTLTPDGKPDAARVADLAGKLNSEFGGSAYAQYGSLFVAKVAVDSGKLDDAATELKAIVA HHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH KPANPALGEIARQRLAQVLGAQNKADEALKLLEGDADKSFLATREELKGDLLVQLGRTDE CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCC ANAAYQKAKAALSDEAAVGGLQIKLDDLAKGDA HHHHHHHHHHHHCCHHHHCCEEEEECCCCCCCC >Mature Secondary Structure SSTEDEQLADLKDWWTRNGKPLVTGGLLALVIVFGWQAYHKYQSNQSQGASVLYQQLLE CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH TTLTPDGKPDAARVADLAGKLNSEFGGSAYAQYGSLFVAKVAVDSGKLDDAATELKAIVA HHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH KPANPALGEIARQRLAQVLGAQNKADEALKLLEGDADKSFLATREELKGDLLVQLGRTDE CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCC ANAAYQKAKAALSDEAAVGGLQIKLDDLAKGDA HHHHHHHHHHHHCCHHHHCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503; 9205837 [H]