| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is guaB [H]
Identifier: 77460809
GI number: 77460809
Start: 5187501
End: 5188970
Strand: Reverse
Name: guaB [H]
Synonym: Pfl01_4588
Alternate gene names: 77460809
Gene position: 5188970-5187501 (Counterclockwise)
Preceding gene: 77460810
Following gene: 77460808
Centisome position: 80.59
GC content: 60.54
Gene sequence:
>1470_bases ATGCTGCGTATCAGCCAAGAAGCTCTGACCTTCGACGACATTCTTTTAGTGCCTGGTTATTCCGAGGTGCTTCCTAACGA AGTCAGTCTGAAGACCCGCCTTACCCGTGGCATCGAGCTGAACATTCCTCTGGTTTCTGCCGCCATGGACACCGTCACCG AAGCCCGTCTGGCAATCGCCATGGCTCAGGAAGGTGGCATCGGCATTATCCACAAGAACATGACCATCGAGCAGCAAGCT GCCGAAGTTCGCAAGGTCAAGAAGTTCGAAGCCGGTGTGGTCAAGGACCCAATCACGATCGAGGCTGACGCCACGGTTCG TGATCTGTTCGAACTGACCCGCATGCACAACATTTCCGGCGTTCCGGTCCTGCACGATGGCGACCTGGTCGGCATCGTCA CTTCCCGTGACGTGCGTTTCGAAACCCGTCTGGACGCCACCGTTCGTGAAGTGATGACGCCGAAAGAGCGTCTGGTCACT GTTCGCGAAGGCGCCGACAAGAACGAAGTCCGCGAGCTGCTGCACAAGCACCGCCTGGAAAAAGTCCTGATCGTCGACGA CAAGTTTGCCCTCAAAGGCATGATGACCGTCAAAGACATCGAAAAAGCCAAGGCCTACCCGCTGGCCAGCAAGGACGACC AAGGTCGTCTGCGCGTCGGCGCTGCGGTCGGTACCGGTAAAGACACCGGTGACCGCGTTGCAGCCCTGGTCAATGCCGGT GTGGACGTGGTGGTGGTCGACACCGCTCACGGTCACTCCAAAGGCGTGATCGACCGCGTTCGCTGGGTCAAAGAGAACTT CCCTGAAGTGCAGGTGATCGGCGGCAACATCGCCACCGGCGCTGCCGCCAAGGCCCTGGCCGAAGCTGGCGCCGACGCGG TCAAGGTCGGTATCGGCCCTGGCTCGATCTGCACCACCCGTATCGTCGCCGGTGTCGGCGTTCCGCAAATCAGTGCCATC GCCAACGTTGCCGCTGCCCTCGAAGGCACCGGCGTTCCGTTGATCGCCGACGGCGGCATCCGTTTCTCCGGTGACCTGTC CAAGGCCATCGTGGCCGGTGCGTCCTGCGTGATGATGGGCTCGATGTTCGCCGGTACCGAAGAAGCACCGGGCGAGATCG AACTGTTCCAGGGCCGTTCGTACAAGGCTTATCGCGGCATGGGTTCGCTGGGCGCCATGTCCCAGGCTCAAGGTTCCTCC GACCGTTACTTCCAGGACTCCTCGGCAGGCGCCGAGAAACTCGTTCCGGAAGGCATCGAAGGCCGTGTGCCTTACAAGGG CACCCTGAGCGCGATCATTCACCAGTTGATGGGCGGTCTGCGTTCCTCGATGGGTTACACCGGCAGCGCCAACATCGAAG AAATGCGCACCAAGCCTGAGTTCGTGCGGATCACCGGTGCCGGCATGGCCGAATCCCACGTTCACGACGTGCAGATCACC AAGGAAGCGCCAAACTACCGCGTAGGTTGA
Upstream 100 bases:
>100_bases TACATCAGCAACATTGATATAAGACAAGTTTTACATTGAGCCCGGTAGGGTGTCTGAGTATAATGGCGCGCTTCCATTTT CCCGCTCGGGAGCCCCCGCG
Downstream 100 bases:
>100_bases GGCTTCAAGCAAAACGTTAAATGACCGGGGCTGTTTTATTCAGCCCCGAGTCGTTTCTGAATTACTTAGACGAGACTGAA TCATGGCCCTCGACATTCAC
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MLRISQEALTFDDILLVPGYSEVLPNEVSLKTRLTRGIELNIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMTIEQQA AEVRKVKKFEAGVVKDPITIEADATVRDLFELTRMHNISGVPVLHDGDLVGIVTSRDVRFETRLDATVREVMTPKERLVT VREGADKNEVRELLHKHRLEKVLIVDDKFALKGMMTVKDIEKAKAYPLASKDDQGRLRVGAAVGTGKDTGDRVAALVNAG VDVVVVDTAHGHSKGVIDRVRWVKENFPEVQVIGGNIATGAAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAI ANVAAALEGTGVPLIADGGIRFSGDLSKAIVAGASCVMMGSMFAGTEEAPGEIELFQGRSYKAYRGMGSLGAMSQAQGSS DRYFQDSSAGAEKLVPEGIEGRVPYKGTLSAIIHQLMGGLRSSMGYTGSANIEEMRTKPEFVRITGAGMAESHVHDVQIT KEAPNYRVG
Sequences:
>Translated_489_residues MLRISQEALTFDDILLVPGYSEVLPNEVSLKTRLTRGIELNIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMTIEQQA AEVRKVKKFEAGVVKDPITIEADATVRDLFELTRMHNISGVPVLHDGDLVGIVTSRDVRFETRLDATVREVMTPKERLVT VREGADKNEVRELLHKHRLEKVLIVDDKFALKGMMTVKDIEKAKAYPLASKDDQGRLRVGAAVGTGKDTGDRVAALVNAG VDVVVVDTAHGHSKGVIDRVRWVKENFPEVQVIGGNIATGAAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAI ANVAAALEGTGVPLIADGGIRFSGDLSKAIVAGASCVMMGSMFAGTEEAPGEIELFQGRSYKAYRGMGSLGAMSQAQGSS DRYFQDSSAGAEKLVPEGIEGRVPYKGTLSAIIHQLMGGLRSSMGYTGSANIEEMRTKPEFVRITGAGMAESHVHDVQIT KEAPNYRVG >Mature_489_residues MLRISQEALTFDDILLVPGYSEVLPNEVSLKTRLTRGIELNIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMTIEQQA AEVRKVKKFEAGVVKDPITIEADATVRDLFELTRMHNISGVPVLHDGDLVGIVTSRDVRFETRLDATVREVMTPKERLVT VREGADKNEVRELLHKHRLEKVLIVDDKFALKGMMTVKDIEKAKAYPLASKDDQGRLRVGAAVGTGKDTGDRVAALVNAG VDVVVVDTAHGHSKGVIDRVRWVKENFPEVQVIGGNIATGAAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAI ANVAAALEGTGVPLIADGGIRFSGDLSKAIVAGASCVMMGSMFAGTEEAPGEIELFQGRSYKAYRGMGSLGAMSQAQGSS DRYFQDSSAGAEKLVPEGIEGRVPYKGTLSAIIHQLMGGLRSSMGYTGSANIEEMRTKPEFVRITGAGMAESHVHDVQIT KEAPNYRVG
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=485, Percent_Identity=43.298969072165, Blast_Score=367, Evalue=1e-102, Organism=Homo sapiens, GI34328928, Length=462, Percent_Identity=44.3722943722944, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI34328930, Length=462, Percent_Identity=44.3722943722944, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI156616279, Length=462, Percent_Identity=44.3722943722944, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI66933016, Length=484, Percent_Identity=42.1487603305785, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI217035152, Length=451, Percent_Identity=44.5676274944568, Blast_Score=359, Evalue=4e-99, Organism=Homo sapiens, GI217035148, Length=485, Percent_Identity=42.2680412371134, Blast_Score=352, Evalue=3e-97, Organism=Homo sapiens, GI217035150, Length=485, Percent_Identity=39.7938144329897, Blast_Score=324, Evalue=1e-88, Organism=Homo sapiens, GI156104880, Length=260, Percent_Identity=36.1538461538462, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI50541954, Length=250, Percent_Identity=37.2, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI50541952, Length=250, Percent_Identity=37.2, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI50541948, Length=250, Percent_Identity=37.2, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI50541956, Length=250, Percent_Identity=37.2, Blast_Score=165, Evalue=7e-41, Organism=Escherichia coli, GI1788855, Length=490, Percent_Identity=67.1428571428571, Blast_Score=611, Evalue=1e-176, Organism=Escherichia coli, GI1786293, Length=228, Percent_Identity=36.4035087719298, Blast_Score=151, Evalue=8e-38, Organism=Caenorhabditis elegans, GI71994385, Length=501, Percent_Identity=38.9221556886228, Blast_Score=306, Evalue=2e-83, Organism=Caenorhabditis elegans, GI71994389, Length=421, Percent_Identity=42.5178147268409, Blast_Score=297, Evalue=6e-81, Organism=Caenorhabditis elegans, GI17560440, Length=241, Percent_Identity=36.0995850622407, Blast_Score=166, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6322012, Length=484, Percent_Identity=40.9090909090909, Blast_Score=341, Evalue=2e-94, Organism=Saccharomyces cerevisiae, GI6323585, Length=484, Percent_Identity=41.1157024793388, Blast_Score=340, Evalue=2e-94, Organism=Saccharomyces cerevisiae, GI6323464, Length=486, Percent_Identity=41.358024691358, Blast_Score=331, Evalue=1e-91, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=41.7159763313609, Blast_Score=260, Evalue=4e-70, Organism=Saccharomyces cerevisiae, GI6319353, Length=102, Percent_Identity=43.1372549019608, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI24641071, Length=483, Percent_Identity=41.8219461697723, Blast_Score=346, Evalue=2e-95, Organism=Drosophila melanogaster, GI24641073, Length=483, Percent_Identity=41.8219461697723, Blast_Score=346, Evalue=2e-95, Organism=Drosophila melanogaster, GI28571163, Length=441, Percent_Identity=41.7233560090703, Blast_Score=307, Evalue=1e-83,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51949; Mature: 51949
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRISQEALTFDDILLVPGYSEVLPNEVSLKTRLTRGIELNIPLVSAAMDTVTEARLAIA CCEECCHHCCCCCEEECCCHHHHCCCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHEEE MAQEGGIGIIHKNMTIEQQAAEVRKVKKFEAGVVKDPITIEADATVRDLFELTRMHNISG EECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCC VPVLHDGDLVGIVTSRDVRFETRLDATVREVMTPKERLVTVREGADKNEVRELLHKHRLE CEEEECCCEEEEEECCCEEEEHHHHHHHHHHCCCHHHEEEECCCCCHHHHHHHHHHHCCC KVLIVDDKFALKGMMTVKDIEKAKAYPLASKDDQGRLRVGAAVGTGKDTGDRVAALVNAG EEEEECCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCC VDVVVVDTAHGHSKGVIDRVRWVKENFPEVQVIGGNIATGAAAKALAEAGADAVKVGIGP CEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCC GSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLSKAIVAGASCVMMG CCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEECCCHHHHHHHCCHHHHHH SMFAGTEEAPGEIELFQGRSYKAYRGMGSLGAMSQAQGSSDRYFQDSSAGAEKLVPEGIE HHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCCHHCCCCCCCEECCCCCCHHHHCCCCCC GRVPYKGTLSAIIHQLMGGLRSSMGYTGSANIEEMRTKPEFVRITGAGMAESHVHDVQIT CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCEEEEEE KEAPNYRVG CCCCCCCCC >Mature Secondary Structure MLRISQEALTFDDILLVPGYSEVLPNEVSLKTRLTRGIELNIPLVSAAMDTVTEARLAIA CCEECCHHCCCCCEEECCCHHHHCCCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHEEE MAQEGGIGIIHKNMTIEQQAAEVRKVKKFEAGVVKDPITIEADATVRDLFELTRMHNISG EECCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCC VPVLHDGDLVGIVTSRDVRFETRLDATVREVMTPKERLVTVREGADKNEVRELLHKHRLE CEEEECCCEEEEEECCCEEEEHHHHHHHHHHCCCHHHEEEECCCCCHHHHHHHHHHHCCC KVLIVDDKFALKGMMTVKDIEKAKAYPLASKDDQGRLRVGAAVGTGKDTGDRVAALVNAG EEEEECCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCC VDVVVVDTAHGHSKGVIDRVRWVKENFPEVQVIGGNIATGAAAKALAEAGADAVKVGIGP CEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCC GSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLSKAIVAGASCVMMG CCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEECCCHHHHHHHCCHHHHHH SMFAGTEEAPGEIELFQGRSYKAYRGMGSLGAMSQAQGSSDRYFQDSSAGAEKLVPEGIE HHHCCCCCCCCCEEEEECCCCHHHCCCCCCCCCHHCCCCCCCEECCCCCCHHHHCCCCCC GRVPYKGTLSAIIHQLMGGLRSSMGYTGSANIEEMRTKPEFVRITGAGMAESHVHDVQIT CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCEEEEEE KEAPNYRVG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA