| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is zraS [C]
Identifier: 77460776
GI number: 77460776
Start: 5138047
End: 5139450
Strand: Direct
Name: zraS [C]
Synonym: Pfl01_4555
Alternate gene names: 77460776
Gene position: 5138047-5139450 (Clockwise)
Preceding gene: 77460775
Following gene: 77460779
Centisome position: 79.8
GC content: 61.18
Gene sequence:
>1404_bases ATGAGCGAGCTGTCTAACCGCCGCATCCTGCTGATCGATGACATGCCGTCGATTCACGAGGACTTTCGCAAGATCCTCGC CCCGGCGCCGGCGCACTCGGCAAAACTGGACGAGATGGAAGCCGCCCTGTTCGGCGTGCCCGCCAAACCCCGGCAAGCAC CTTTCGAGCTGGATTCGGCCTACGGTGGAGAGGAAGGCCTGGCCAAACTCAACCTGGCCCTGCAGGAGCAATGCCCGTAT GCCCTGGCCTTCGTCGACATGCGCATGCCGGACGGTTGGGACGGAGCGCGCACCATCGAAGAACTCTGGAAGCAGGATCC GCAGTTGCAGGTGGTGGTCTGCACCGCCTATTCCGATTACTCCTGGGACGAACTGCTGGATCGTCTGCACGCCCATGACC GACTGCTGATCCTGAAAAAACCCTTCGACAACATCGAAGTCCAGCAGATGGCCAACACCCTGCTGACCAAATGGCAGATG ACCGAACGCGCGTCCCTGCAGATGCATCACCTGGAACATCTGGTGGATCAGCGCACCGCCCAGTTCCGGCAGGCCAGTGA AGCCTTGCAGCGGGAAATCGATGAGCGCAAACAGCTGGAAGGCCAACTGGTGCAATCGGAAAAACTCGCCTCGCTGGGTC AACTGGCCGCCGGGGTCGCCCATGAAATCAACAACCCGATCGGCTTCATCTCCTCCAACCTCGGTACGCTCGACGGCTAC TTCCAGCAACTGCTGGCCATGCTCGGCGCCTATCACACCGCCGGGCAGAACTTGCCCGCCGAAGCCGCCGCGCAGTTGCA GCAATTGCGCGAGCGTCTTGAACTGGACTATCTGCTGGAAGACATCCCGACGCTGATTCGCGAATCCAAGGAGGGCATTG GTCGGGTCGGACAGATCGTCCGGGATCTCAAGGATTTCTCCCGAGTCGACAGCCATCAGGAATGGCAGTGGGCCAATCTG CAACAAGGCATCGAATCGACCCTGAACATCGTCGCCGGCGAACTCAAGTACAAGGCCGATGTGGTCAAGGAATATCAGGA TCTGCCGGACATCGAATGCCTGCCCTCGCAAATCAATCAGGTCATCATGAACCTGGTGGTCAACGCGGCGCAGGCCATGG GCCCGGAGCGCGGCACCATCACCCTGCGCACCGGCGTGCAGGGCGAAACGGCAATCATCGAAGTGGCCGACACCGGTTCT GGCATCGCCCCCGAGACCTTGCAGAAAATCTTCGACCCGTTCTTCACCACCAAACCGGTGGGCCAGGGGACAGGCCTGGG CCTGTCCCTGTCGTATGGCATCGTGAAGAAACACGGCGGCGATATTTCCGTGCGCAGCACGTTGGGCGCCGGCACGACGT TCCGCGTGCAGTTGCCGTTACGCCAGACCCGCCCGGCGGCCTGA
Upstream 100 bases:
>100_bases CCATCGAGATGAACGGCCACCTCACCGCCCACAGCGACGGACCGGGGCTGGGCGCCTTGTTCACCCTGCAGATTCCGCTG ATCACCGTTACGGAGAACGC
Downstream 100 bases:
>100_bases TGCCGGGTCAGGCGGCTTCCTGGAAATCCATCTCCGGCGGCTGCCGGCGGAAGCCACCCGTAAGCACCGCCAGGTACACC ACGCCAATCGCCAGCCAGCT
Product: response regulator receiver Signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MSELSNRRILLIDDMPSIHEDFRKILAPAPAHSAKLDEMEAALFGVPAKPRQAPFELDSAYGGEEGLAKLNLALQEQCPY ALAFVDMRMPDGWDGARTIEELWKQDPQLQVVVCTAYSDYSWDELLDRLHAHDRLLILKKPFDNIEVQQMANTLLTKWQM TERASLQMHHLEHLVDQRTAQFRQASEALQREIDERKQLEGQLVQSEKLASLGQLAAGVAHEINNPIGFISSNLGTLDGY FQQLLAMLGAYHTAGQNLPAEAAAQLQQLRERLELDYLLEDIPTLIRESKEGIGRVGQIVRDLKDFSRVDSHQEWQWANL QQGIESTLNIVAGELKYKADVVKEYQDLPDIECLPSQINQVIMNLVVNAAQAMGPERGTITLRTGVQGETAIIEVADTGS GIAPETLQKIFDPFFTTKPVGQGTGLGLSLSYGIVKKHGGDISVRSTLGAGTTFRVQLPLRQTRPAA
Sequences:
>Translated_467_residues MSELSNRRILLIDDMPSIHEDFRKILAPAPAHSAKLDEMEAALFGVPAKPRQAPFELDSAYGGEEGLAKLNLALQEQCPY ALAFVDMRMPDGWDGARTIEELWKQDPQLQVVVCTAYSDYSWDELLDRLHAHDRLLILKKPFDNIEVQQMANTLLTKWQM TERASLQMHHLEHLVDQRTAQFRQASEALQREIDERKQLEGQLVQSEKLASLGQLAAGVAHEINNPIGFISSNLGTLDGY FQQLLAMLGAYHTAGQNLPAEAAAQLQQLRERLELDYLLEDIPTLIRESKEGIGRVGQIVRDLKDFSRVDSHQEWQWANL QQGIESTLNIVAGELKYKADVVKEYQDLPDIECLPSQINQVIMNLVVNAAQAMGPERGTITLRTGVQGETAIIEVADTGS GIAPETLQKIFDPFFTTKPVGQGTGLGLSLSYGIVKKHGGDISVRSTLGAGTTFRVQLPLRQTRPAA >Mature_466_residues SELSNRRILLIDDMPSIHEDFRKILAPAPAHSAKLDEMEAALFGVPAKPRQAPFELDSAYGGEEGLAKLNLALQEQCPYA LAFVDMRMPDGWDGARTIEELWKQDPQLQVVVCTAYSDYSWDELLDRLHAHDRLLILKKPFDNIEVQQMANTLLTKWQMT ERASLQMHHLEHLVDQRTAQFRQASEALQREIDERKQLEGQLVQSEKLASLGQLAAGVAHEINNPIGFISSNLGTLDGYF QQLLAMLGAYHTAGQNLPAEAAAQLQQLRERLELDYLLEDIPTLIRESKEGIGRVGQIVRDLKDFSRVDSHQEWQWANLQ QGIESTLNIVAGELKYKADVVKEYQDLPDIECLPSQINQVIMNLVVNAAQAMGPERGTITLRTGVQGETAIIEVADTGSG IAPETLQKIFDPFFTTKPVGQGTGLGLSLSYGIVKKHGGDISVRSTLGAGTTFRVQLPLRQTRPAA
Specific function: Member Of The Two-Component Regulatory System Zras/Zrar. May Function As A Membrane-Associated Protein Kinase That Phosphorylates Zrar In Response To High Concentrations Of Zinc Or Lead In The Medium. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=282, Percent_Identity=32.6241134751773, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1788549, Length=272, Percent_Identity=33.4558823529412, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1790300, Length=281, Percent_Identity=28.1138790035587, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI87081816, Length=146, Percent_Identity=36.986301369863, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI145693157, Length=179, Percent_Identity=32.9608938547486, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI87082128, Length=170, Percent_Identity=30.5882352941176, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1789808, Length=198, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1786912, Length=187, Percent_Identity=28.8770053475936, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1786783, Length=261, Percent_Identity=24.904214559387, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI48994928, Length=109, Percent_Identity=33.9449541284404, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1788713, Length=284, Percent_Identity=24.6478873239437, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001638 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00497 SBP_bac_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51922; Mature: 51791
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELSNRRILLIDDMPSIHEDFRKILAPAPAHSAKLDEMEAALFGVPAKPRQAPFELDSA CCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHC YGGEEGLAKLNLALQEQCPYALAFVDMRMPDGWDGARTIEELWKQDPQLQVVVCTAYSDY CCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCC SWDELLDRLHAHDRLLILKKPFDNIEVQQMANTLLTKWQMTERASLQMHHLEHLVDQRTA CHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFRQASEALQREIDERKQLEGQLVQSEKLASLGQLAAGVAHEINNPIGFISSNLGTLDGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHH FQQLLAMLGAYHTAGQNLPAEAAAQLQQLRERLELDYLLEDIPTLIRESKEGIGRVGQIV HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDLKDFSRVDSHQEWQWANLQQGIESTLNIVAGELKYKADVVKEYQDLPDIECLPSQINQ HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VIMNLVVNAAQAMGPERGTITLRTGVQGETAIIEVADTGSGIAPETLQKIFDPFFTTKPV HHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCC GQGTGLGLSLSYGIVKKHGGDISVRSTLGAGTTFRVQLPLRQTRPAA CCCCCCCEEEECCHHHHCCCCEEEEEECCCCCEEEEEECHHHCCCCC >Mature Secondary Structure SELSNRRILLIDDMPSIHEDFRKILAPAPAHSAKLDEMEAALFGVPAKPRQAPFELDSA CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHC YGGEEGLAKLNLALQEQCPYALAFVDMRMPDGWDGARTIEELWKQDPQLQVVVCTAYSDY CCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCC SWDELLDRLHAHDRLLILKKPFDNIEVQQMANTLLTKWQMTERASLQMHHLEHLVDQRTA CHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFRQASEALQREIDERKQLEGQLVQSEKLASLGQLAAGVAHEINNPIGFISSNLGTLDGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHH FQQLLAMLGAYHTAGQNLPAEAAAQLQQLRERLELDYLLEDIPTLIRESKEGIGRVGQIV HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDLKDFSRVDSHQEWQWANLQQGIESTLNIVAGELKYKADVVKEYQDLPDIECLPSQINQ HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VIMNLVVNAAQAMGPERGTITLRTGVQGETAIIEVADTGSGIAPETLQKIFDPFFTTKPV HHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCC GQGTGLGLSLSYGIVKKHGGDISVRSTLGAGTTFRVQLPLRQTRPAA CCCCCCCEEEECCHHHHCCCCEEEEEECCCCCEEEEEECHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1333793 [H]