| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460770
Identifier: 77460770
GI number: 77460770
Start: 5129048
End: 5129482
Strand: Reverse
Name: 77460770
Synonym: Pfl01_4549
Alternate gene names: NA
Gene position: 5129482-5129048 (Counterclockwise)
Preceding gene: 77460771
Following gene: 77460769
Centisome position: 79.67
GC content: 63.45
Gene sequence:
>435_bases ATGACCTCTGTATCCGCTGTTTCCCCTCGCATCATTCGTATTGCCGCCGCGCTGCTGCTCAACTCCGCCGGCCAGACCCT GCTGGTGCGCAAGCGCAACACCACGGCGTTCATGCAACCGGGCGGCAAGATCGAGGCCCACGAGCTGCCGGTGCATGCGC TGGCCCGTGAGCTGGAAGAAGAGCTGGGGCTGGTGATCGATCCGGTGCAGGCGAGCTTTCTCGGCCAGTTCTCGGCACCC GCCGCCAACGAGCCGGGATTCGTCGTGCAGGCCGAGATCTTTCAGCTGACCATCGACGCCAAGGTGTCTCCAGCCGCCGA GATCGAAGAGGTGATCTGGATTGATCCTGCCACCGACGGCGATGTGGTTCTCGCCCCATTGACACGCGACCTGATCCTGC CGTTTTATCGAGCCTCGCTGACCGCGATCGCCTGA
Upstream 100 bases:
>100_bases ACCGGAGGAGGGGGAAAGCGTGCTTCTGGCCCAGGGGTGATGACGCTGACGCGACCGGCATGGGATCCTTGCGGTTTTTC TCAAGGCCGGTGGCTGCCCC
Downstream 100 bases:
>100_bases TCATTCGTGCAAAGGACTTCGTCATGATCCCGCTTCAAGACCTGCTGATTTTTGCCGCCGCCGCCCTGCTGATGGTACTG ACGCCGGGGCCGAACATGAT
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NTP Pyrophosphohydrolase Including Oxidative Damage Repair; MutT/Nudix Family Protein; MutT Family NTP Pyrophosphatase; NUDIX Family Protein; Phosphatase; MutT/NUDIX Family Protein; Phosphohydrolase; NUDIX Family Hydrolase; ADP-Ribose Pyrophosphatase; NTP Pyrophosphohydrolase; MutT/Nudix Family Hydrolase; MutT/Nudix Family Phosphohydrolase; Hydrolase Nudix Family; NUDIX Protein; Hydrolase Nudix Family Protein; Hydrolase NUDIX Family
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTSVSAVSPRIIRIAAALLLNSAGQTLLVRKRNTTAFMQPGGKIEAHELPVHALARELEEELGLVIDPVQASFLGQFSAP AANEPGFVVQAEIFQLTIDAKVSPAAEIEEVIWIDPATDGDVVLAPLTRDLILPFYRASLTAIA
Sequences:
>Translated_144_residues MTSVSAVSPRIIRIAAALLLNSAGQTLLVRKRNTTAFMQPGGKIEAHELPVHALARELEEELGLVIDPVQASFLGQFSAP AANEPGFVVQAEIFQLTIDAKVSPAAEIEEVIWIDPATDGDVVLAPLTRDLILPFYRASLTAIA >Mature_143_residues TSVSAVSPRIIRIAAALLLNSAGQTLLVRKRNTTAFMQPGGKIEAHELPVHALARELEEELGLVIDPVQASFLGQFSAPA ANEPGFVVQAEIFQLTIDAKVSPAAEIEEVIWIDPATDGDVVLAPLTRDLILPFYRASLTAIA
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15398; Mature: 15267
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVSAVSPRIIRIAAALLLNSAGQTLLVRKRNTTAFMQPGGKIEAHELPVHALARELEE CCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEEHHCCCHHHHHHHHHH ELGLVIDPVQASFLGQFSAPAANEPGFVVQAEIFQLTIDAKVSPAAEIEEVIWIDPATDG HCCEEECCCHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEEECCCCCC DVVLAPLTRDLILPFYRASLTAIA CEEEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TSVSAVSPRIIRIAAALLLNSAGQTLLVRKRNTTAFMQPGGKIEAHELPVHALARELEE CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEEHHCCCHHHHHHHHHH ELGLVIDPVQASFLGQFSAPAANEPGFVVQAEIFQLTIDAKVSPAAEIEEVIWIDPATDG HCCEEECCCHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEEECCCCCC DVVLAPLTRDLILPFYRASLTAIA CEEEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA