| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gltI [H]
Identifier: 77460756
GI number: 77460756
Start: 5110136
End: 5111050
Strand: Direct
Name: gltI [H]
Synonym: Pfl01_4535
Alternate gene names: 77460756
Gene position: 5110136-5111050 (Clockwise)
Preceding gene: 77460755
Following gene: 77460757
Centisome position: 79.37
GC content: 57.7
Gene sequence:
>915_bases ATGCGCATCGTTCCCCATATCCTGGGCGCAGCCATTGCTGCCGCTCTGATCAGCACACCAGTTTTCGCTGCCGAACTCAC CGGCACCCTTAAGAAGATCAAAGAGTCCGGCGTCATTACTTTGGGCCACCGTGACGCTTCCATTCCTTTCTCCTACATCG CTGACGCTTCCGGCAAGCCGGTCGGCTACTCCCACGATATCCAGCTGGCCATCGTCGAAGCGATCAAGAAAGACCTCGAC CTGCCAAACCTGCAGGTCAAATACAACCTCGTCACTTCGCAAACCCGTATCCCGCTGGTGCAGAACGGCACCGTGGACGT CGAGTGCGGCTCCACCACCAACAACGTCGAGCGTCAGCAACAGGTCGACTTCTCCGTCGGCATCTTCGAAATCGGTACCC GTCTGCTGTCCAAGGCTGACTCCAAGTACAAGGACTTCGACGATCTGAAAGGCAAGAACGTCGTGACCACCGCCGGCACC ACTTCCGAGCGCATCCTCAAGGCAATGAACGCCGACAAGCAGATGGGCATGAACGTGATCTCCGCCAAGGACCACGGTGA ATCCTTCCAGATGCTGGAATCGGGTCGTGCCGTCGCGTTCATGATGGACGACGCCCTGCTGGCCGGCGAAGCCGCCAAAG CCAAGAAAGCCTCCGACTGGGCCGTGACCGGCACTCCACAGTCGTACGAAATCTATGGCTGCATGATGCGCAAGGGCGAC GAGCCGTTCAAAAAGGCTGTCGACGACGCCATCAAGGCGACCTACGCTTCGGGTGAGATCAACAAGATCTACGAAAAATG GTTCATGCAGCCGATTCCGCCAAAAGGCCTGAACCTGAACTTCCCGATGAGCGACGAGCTCAAGGCCCTGATCGCCAATC CGACCGACAAAGCGGCTGACGACAAGAAATCCTGA
Upstream 100 bases:
>100_bases AATGCCTGTTGCGCCAACACAGCAGGAGCCGTCAGGCATTCGAAGTACAAAGGGCCCGCTCAACCGGCTCCATAAAAAAA ACAATGTCGAGGAAAATTTG
Downstream 100 bases:
>100_bases TTTCTGACTAACCTTATCCCCTGAGGAGGCGCCTGCCTTCTCAGGGGATGGTCACTCCCTGCTGGCACTTATTGGAAACA CTCGAACCGGTGGCTGTCGA
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MRIVPHILGAAIAAALISTPVFAAELTGTLKKIKESGVITLGHRDASIPFSYIADASGKPVGYSHDIQLAIVEAIKKDLD LPNLQVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSVGIFEIGTRLLSKADSKYKDFDDLKGKNVVTTAGT TSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDALLAGEAAKAKKASDWAVTGTPQSYEIYGCMMRKGD EPFKKAVDDAIKATYASGEINKIYEKWFMQPIPPKGLNLNFPMSDELKALIANPTDKAADDKKS
Sequences:
>Translated_304_residues MRIVPHILGAAIAAALISTPVFAAELTGTLKKIKESGVITLGHRDASIPFSYIADASGKPVGYSHDIQLAIVEAIKKDLD LPNLQVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSVGIFEIGTRLLSKADSKYKDFDDLKGKNVVTTAGT TSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDALLAGEAAKAKKASDWAVTGTPQSYEIYGCMMRKGD EPFKKAVDDAIKATYASGEINKIYEKWFMQPIPPKGLNLNFPMSDELKALIANPTDKAADDKKS >Mature_304_residues MRIVPHILGAAIAAALISTPVFAAELTGTLKKIKESGVITLGHRDASIPFSYIADASGKPVGYSHDIQLAIVEAIKKDLD LPNLQVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQQVDFSVGIFEIGTRLLSKADSKYKDFDDLKGKNVVTTAGT TSERILKAMNADKQMGMNVISAKDHGESFQMLESGRAVAFMMDDALLAGEAAKAKKASDWAVTGTPQSYEIYGCMMRKGD EPFKKAVDDAIKATYASGEINKIYEKWFMQPIPPKGLNLNFPMSDELKALIANPTDKAADDKKS
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=270, Percent_Identity=61.4814814814815, Blast_Score=338, Evalue=2e-94, Organism=Escherichia coli, GI1788228, Length=264, Percent_Identity=29.5454545454545, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787031, Length=226, Percent_Identity=27.8761061946903, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 32996; Mature: 32996
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVPHILGAAIAAALISTPVFAAELTGTLKKIKESGVITLGHRDASIPFSYIADASGKP CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHCCCCCCC VGYSHDIQLAIVEAIKKDLDLPNLQVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQ CCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEECCEEEEEECCCCCCHHHHH QVDFSVGIFEIGTRLLSKADSKYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVI HCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEECCCCHHHHHHHHCCCHHHCCEEE SAKDHGESFQMLESGRAVAFMMDDALLAGEAAKAKKASDWAVTGTPQSYEIYGCMMRKGD ECCCCCHHHHHHHCCCEEEEEECCHHHCCCHHHCCCCCCCEEECCCCCEEEEEEEECCCC EPFKKAVDDAIKATYASGEINKIYEKWFMQPIPPKGLNLNFPMSDELKALIANPTDKAAD CHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHCCCCCCCCC DKKS CCCC >Mature Secondary Structure MRIVPHILGAAIAAALISTPVFAAELTGTLKKIKESGVITLGHRDASIPFSYIADASGKP CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHCCCCCCC VGYSHDIQLAIVEAIKKDLDLPNLQVKYNLVTSQTRIPLVQNGTVDVECGSTTNNVERQQ CCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEECCEEEEEECCCCCCHHHHH QVDFSVGIFEIGTRLLSKADSKYKDFDDLKGKNVVTTAGTTSERILKAMNADKQMGMNVI HCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEECCCCHHHHHHHHCCCHHHCCEEE SAKDHGESFQMLESGRAVAFMMDDALLAGEAAKAKKASDWAVTGTPQSYEIYGCMMRKGD ECCCCCHHHHHHHCCCEEEEEECCHHHCCCHHHCCCCCCCEEECCCCCEEEEEEEECCCC EPFKKAVDDAIKATYASGEINKIYEKWFMQPIPPKGLNLNFPMSDELKALIANPTDKAAD CHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHCCCCCCCCC DKKS CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]