| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gltJ [H]
Identifier: 77460757
GI number: 77460757
Start: 5111245
End: 5111991
Strand: Direct
Name: gltJ [H]
Synonym: Pfl01_4536
Alternate gene names: 77460757
Gene position: 5111245-5111991 (Clockwise)
Preceding gene: 77460756
Following gene: 77460758
Centisome position: 79.39
GC content: 60.64
Gene sequence:
>747_bases ATGAATTACAACTGGGACTGGGGCGTGTTCTTCAAGTCCACCGGCGTGGGCAGCGAGACCTATCTCGACTGGTTCATTTC CGGTCTGGGCTGGACCATCGCCATCGCCATCGTGGCCTGGATCATCGCCCTGTTGCTCGGCTCGCTGCTGGGCATCATGC GCACCGTGCCGAACCGCATCGTGTCGGGCATCGCGACCTGCTACGTCGAACTGTTCCGCAACGTGCCGCTGCTGGTTCAG CTGTTCATCTGGTACTTCCTGGTGCCCGATCTGCTGCCGCCGGATCTGCAGGAATGGTACAAGCAGGACCTGAACCCGAC CACTTCGGCCTACCTGAGTGTTGTCGTGTGCCTGGGCCTGTTCACCGCCGCCCGGGTCTGCGAACAGGTTCGCACCGGTA TCCAGGCACTGCCACGCGGCCAGGAATCCGCCGCCCGCGCCATGGGTTTCAAGCTGCCGCAGATCTACTGGAACGTGCTG CTGCCCCAAGCCTACCGGATCATCATTCCGCCGCTCACCTCGGAATTCCTGAACGTGTTCAAGAACTCCTCCGTGGCGTC CCTGATCGGTCTGATGGAGCTGCTGGCGCAAACCAAACAGACCGCCGAATTCTCGGCCAACCTGTTTGAAGCCTTCACCC TGGCGACCCTGATCTATTTCACCCTCAACATGAGCCTGATGCTGCTGATGCGCATGGTCGAGAAGAAAGTCGCCGTGCCC GGCCTGATCTCCGTGGGGGGTAAATAA
Upstream 100 bases:
>100_bases TGTCGAGCCGATCGCGTGTGCCTGATTTTCACAATCAGGGTGGGAACGGAGCTTCCCCAGGCGGGCACTTGTACATCGAT CGAATCGAGGGGAGACCCTA
Downstream 100 bases:
>100_bases TGGAATTCGATTTCAGTGGCATCGTTCCGGCCATTCCCGGCCTGTGGAACGGCATGCTGATGACCCTCAAGCTGATGGCG CTGGGCGTGGTCGGCGGGAT
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MNYNWDWGVFFKSTGVGSETYLDWFISGLGWTIAIAIVAWIIALLLGSLLGIMRTVPNRIVSGIATCYVELFRNVPLLVQ LFIWYFLVPDLLPPDLQEWYKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGFKLPQIYWNVL LPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMVEKKVAVP GLISVGGK
Sequences:
>Translated_248_residues MNYNWDWGVFFKSTGVGSETYLDWFISGLGWTIAIAIVAWIIALLLGSLLGIMRTVPNRIVSGIATCYVELFRNVPLLVQ LFIWYFLVPDLLPPDLQEWYKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGFKLPQIYWNVL LPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMVEKKVAVP GLISVGGK >Mature_248_residues MNYNWDWGVFFKSTGVGSETYLDWFISGLGWTIAIAIVAWIIALLLGSLLGIMRTVPNRIVSGIATCYVELFRNVPLLVQ LFIWYFLVPDLLPPDLQEWYKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGFKLPQIYWNVL LPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMVEKKVAVP GLISVGGK
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=248, Percent_Identity=54.8387096774194, Blast_Score=288, Evalue=3e-79, Organism=Escherichia coli, GI1786873, Length=236, Percent_Identity=29.6610169491525, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1788226, Length=216, Percent_Identity=31.0185185185185, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI48994930, Length=128, Percent_Identity=35.15625, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI87082239, Length=217, Percent_Identity=31.3364055299539, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1787086, Length=216, Percent_Identity=28.7037037037037, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787030, Length=214, Percent_Identity=24.7663551401869, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=26.457399103139, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1788645, Length=214, Percent_Identity=27.1028037383178, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788646, Length=170, Percent_Identity=26.4705882352941, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27744; Mature: 27744
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYNWDWGVFFKSTGVGSETYLDWFISGLGWTIAIAIVAWIIALLLGSLLGIMRTVPNRI CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSGIATCYVELFRNVPLLVQLFIWYFLVPDLLPPDLQEWYKQDLNPTTSAYLSVVVCLGL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHH FTAARVCEQVRTGIQALPRGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVF HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHH KNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMVEKKVAVP HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLISVGGK CHHCCCCC >Mature Secondary Structure MNYNWDWGVFFKSTGVGSETYLDWFISGLGWTIAIAIVAWIIALLLGSLLGIMRTVPNRI CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSGIATCYVELFRNVPLLVQLFIWYFLVPDLLPPDLQEWYKQDLNPTTSAYLSVVVCLGL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHH FTAARVCEQVRTGIQALPRGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVF HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHH KNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMVEKKVAVP HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLISVGGK CHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]