Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77460690

Identifier: 77460690

GI number: 77460690

Start: 5039726

End: 5040829

Strand: Reverse

Name: 77460690

Synonym: Pfl01_4469

Alternate gene names: NA

Gene position: 5040829-5039726 (Counterclockwise)

Preceding gene: 77460691

Following gene: 77460689

Centisome position: 78.29

GC content: 62.14

Gene sequence:

>1104_bases
ATGGGCGAGCACGATCTGAACAGGCGTCAATTCATCAAAACCGTCGGCGTGGCCTCGGTGGCTGCGGCGGCCATGAGCAT
GCCCTTCATCCGGGCCAGTGCCAGCGACACCCGTTTTGCCGGCAAGACCCTGCGCCTGTTGACCTGGTCCGATGACACGG
GCCTGGCCGCACTGCGCAATATCGCGGCAACGTTCGAAGCCAAGACTGGCGCCAAAGTGATTGCCGACCGCACTGGCAGC
ACCTCGGAAATGGTCGCCAAACTCAAGGCCGGCGGTGATCGTCCGCAGTACGACATCATCACTCTGGCTGGCGTTGGCGC
CGAAGGTCTGGCCGCTGCCGGGTTGCTGGAAAAACCCGACCTCAACCGCATTCCCAACCTGATCGACGTCCCGGAAAAAT
ACCGCACCGGGGCCAACGGTCACGGCATCGGCTACCTGCTGTGGTGCAACAGCCTGGTCTACAGCACCCGCACTCAGAAG
GAAGCGCCGGACAGTTACGCCGCGCTGTGGGACGCCGATCTGGCACCGAACATTTTCCTGCCACCGCCGAACTGGACCGA
GGCGATGGACCTGATCATCATTGCCGCCAAACTGGCCGGTGGTGACGAGCACAACATCGAACCGGGCTTCAAGAAACTCG
CGGAGCTGAAAGACCGCGTGGTGACCCTGGGCGAAAACCCCAACCAGATCGCCGAGCTGTTCCGCACCGGCTCCCTGGAC
ATGGGCGGCCTCTACGCCCCGGCGTTTTTCCCCAAGCAGATCCGCGACCCGAACTATGGCCTGGGCGCCACGTTCGGCAT
GAAGGAAGGTTTCTACACCGACCTGATGCTCTCGGTGATGCCGAAGAACCGTCCGGGCGACACCGACCTGGCCTACGCCT
TCATCGATCACTCCCTCGACCCGCTGGTGCAGGGCAAGATGGCCGAAGACATCTTCAACGGTCCGGTCAACGCCAAGGCG
ATCATCTCCGCCGAAGCACGCAAGAGCCCGTTCATCCTCACGCCGGAGCAGATCGCGGAGAAGGCGATCATGCACGACAA
CGCCTTCCTGGCGACCGTGCATGACCAGTGGATTCGTCGCTACACGGAAATCTTTTCTTCCTGA

Upstream 100 bases:

>100_bases
CACGTTCAAGCCCTTTGAAATCGGGGGGTTGGGCGGTTCCGATCACGCACGGCAAGGGTTGCGGTCAATCTCATACTTAC
AAAAATAATGGGAGTCCTAA

Downstream 100 bases:

>100_bases
CGCCGACCTTCCGGGGCACCGCATGATCGGGGTGCCCGGGAGATTCGTTTTCCATTGACGAGATCATTGCTATGGAACAT
CAATCCCTGACCCAACCGGT

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MGEHDLNRRQFIKTVGVASVAAAAMSMPFIRASASDTRFAGKTLRLLTWSDDTGLAALRNIAATFEAKTGAKVIADRTGS
TSEMVAKLKAGGDRPQYDIITLAGVGAEGLAAAGLLEKPDLNRIPNLIDVPEKYRTGANGHGIGYLLWCNSLVYSTRTQK
EAPDSYAALWDADLAPNIFLPPPNWTEAMDLIIIAAKLAGGDEHNIEPGFKKLAELKDRVVTLGENPNQIAELFRTGSLD
MGGLYAPAFFPKQIRDPNYGLGATFGMKEGFYTDLMLSVMPKNRPGDTDLAYAFIDHSLDPLVQGKMAEDIFNGPVNAKA
IISAEARKSPFILTPEQIAEKAIMHDNAFLATVHDQWIRRYTEIFSS

Sequences:

>Translated_367_residues
MGEHDLNRRQFIKTVGVASVAAAAMSMPFIRASASDTRFAGKTLRLLTWSDDTGLAALRNIAATFEAKTGAKVIADRTGS
TSEMVAKLKAGGDRPQYDIITLAGVGAEGLAAAGLLEKPDLNRIPNLIDVPEKYRTGANGHGIGYLLWCNSLVYSTRTQK
EAPDSYAALWDADLAPNIFLPPPNWTEAMDLIIIAAKLAGGDEHNIEPGFKKLAELKDRVVTLGENPNQIAELFRTGSLD
MGGLYAPAFFPKQIRDPNYGLGATFGMKEGFYTDLMLSVMPKNRPGDTDLAYAFIDHSLDPLVQGKMAEDIFNGPVNAKA
IISAEARKSPFILTPEQIAEKAIMHDNAFLATVHDQWIRRYTEIFSS
>Mature_366_residues
GEHDLNRRQFIKTVGVASVAAAAMSMPFIRASASDTRFAGKTLRLLTWSDDTGLAALRNIAATFEAKTGAKVIADRTGST
SEMVAKLKAGGDRPQYDIITLAGVGAEGLAAAGLLEKPDLNRIPNLIDVPEKYRTGANGHGIGYLLWCNSLVYSTRTQKE
APDSYAALWDADLAPNIFLPPPNWTEAMDLIIIAAKLAGGDEHNIEPGFKKLAELKDRVVTLGENPNQIAELFRTGSLDM
GGLYAPAFFPKQIRDPNYGLGATFGMKEGFYTDLMLSVMPKNRPGDTDLAYAFIDHSLDPLVQGKMAEDIFNGPVNAKAI
ISAEARKSPFILTPEQIAEKAIMHDNAFLATVHDQWIRRYTEIFSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39906; Mature: 39775

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEHDLNRRQFIKTVGVASVAAAAMSMPFIRASASDTRFAGKTLRLLTWSDDTGLAALRN
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEECCCEEEEEEECCCCHHHHHHH
IAATFEAKTGAKVIADRTGSTSEMVAKLKAGGDRPQYDIITLAGVGAEGLAAAGLLEKPD
HHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCCCC
LNRIPNLIDVPEKYRTGANGHGIGYLLWCNSLVYSTRTQKEAPDSYAALWDADLAPNIFL
HHHCCCHHCCCHHHCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCHHHHHCCCCCCCCEEE
PPPNWTEAMDLIIIAAKLAGGDEHNIEPGFKKLAELKDRVVTLGENPNQIAELFRTGSLD
CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCC
MGGLYAPAFFPKQIRDPNYGLGATFGMKEGFYTDLMLSVMPKNRPGDTDLAYAFIDHSLD
CCCEECCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
PLVQGKMAEDIFNGPVNAKAIISAEARKSPFILTPEQIAEKAIMHDNAFLATVHDQWIRR
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHCCCCEEEHHHHHHHHH
YTEIFSS
HHHHHCC
>Mature Secondary Structure 
GEHDLNRRQFIKTVGVASVAAAAMSMPFIRASASDTRFAGKTLRLLTWSDDTGLAALRN
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEECCCEEEEEEECCCCHHHHHHH
IAATFEAKTGAKVIADRTGSTSEMVAKLKAGGDRPQYDIITLAGVGAEGLAAAGLLEKPD
HHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHCCCCCCC
LNRIPNLIDVPEKYRTGANGHGIGYLLWCNSLVYSTRTQKEAPDSYAALWDADLAPNIFL
HHHCCCHHCCCHHHCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCHHHHHCCCCCCCCEEE
PPPNWTEAMDLIIIAAKLAGGDEHNIEPGFKKLAELKDRVVTLGENPNQIAELFRTGSLD
CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEECCCCHHHHHHHHHCCCCC
MGGLYAPAFFPKQIRDPNYGLGATFGMKEGFYTDLMLSVMPKNRPGDTDLAYAFIDHSLD
CCCEECCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC
PLVQGKMAEDIFNGPVNAKAIISAEARKSPFILTPEQIAEKAIMHDNAFLATVHDQWIRR
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEECHHHHHHHHHHCCCCEEEHHHHHHHHH
YTEIFSS
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA