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The map label for this gene is rhsD [C]

Identifier: 77460675

GI number: 77460675

Start: 5019674

End: 5022460

Strand: Direct

Name: rhsD [C]

Synonym: Pfl01_4454

Alternate gene names: 77460675

Gene position: 5019674-5022460 (Clockwise)

Preceding gene: 77460674

Following gene: 77460676

Centisome position: 77.96

GC content: 60.17

Gene sequence:

>2787_bases
ATGAACGCCAGCGTGCACTGGCACACCCCGACGGTGGCCGTCAACGGACCGCGCGGCGAGACCTACAGACACATCGATTA
CCTGCGCAGGGTGGCTGGAGAGGATGTGCAGGCGCTCATTACCCGACAGCAATATGACGTTGCCGGCCGACTGGTCGCGC
TGCGCGATCCGCGTCTGCCCACGCCCAATACCACAACGGTGCACAGGCTGGACGGCGTGGCGATCAGGACGATCAACGTT
GACGGTGGCGAAAACACGGTGCTGCAGGGTGTCGGTGGCGAGCTTCTTCAGAATTGGGATGCTAACCGCAATCACCGGGA
AATGACCTACGACCCGCAACTGCGTCTGCGGGCCGTCACGGAAAACGGTGCAGCGAACTTCGAAACCTTCCACTACCTCG
ACGCTTCGGCCGACCCGACACACAATCTGCGCGGACAGATGACGGCGCTGAGCGATCCATCAGGCACGCTCGCCCTCGAC
AGCTTCGGCATGCACGGACAGACGCTGGAAGAAACCCGCACCTTCAAGGACGGCAAAACCTGCACCAGCCGTCGGGTCTT
CAGCGCCGTCGGCGCACTGTTGCAAACCACTGACGCCGGCGGGCACCTGCAACAGTCGACCTACGACATCGCCGGGCAAC
TCGTCCAGGTACAACTGCAACTCGACGGACAAGCCTTCCAGCCGGTTTTGAAAGGTGCGGATTACAACGCCGCCGGCCAG
ATCACCGAACAACGGCTCGGCAACGACGTGACCAACCGCTGGTGCTACCGGGACACCGACGGACGCCTGCTGCGACAGTA
CGCGCAAAAGGCTTCAGGGCAGGCGATTCAGGATTTCGGGTATGGATACGACCGGGTGGGCAACACCACCCGCATTGTTG
ACCACACCTACACACCGACATATTTCCGCAACCAGCGGGTCGACGGCCAGCGCACGTTTGACCATGACACGACTTATCAG
CTGATCCGCGCCACCGGGTACAGCGACGCCCCGCCCAGAGACAACCCGGGCCGGCCTCAGCCAACCGACCCACGGGACCG
GCGCAACTATGTCGAGACCTACGAATACGACGAAGGCAAAAACCTGACCCTGCTCACCCATGTCCGCGACGGCAGTGCCC
ATACCTTCGAGATGTGCATCGACCCGGGCAGCAACCGTGGTGTGCGCTGGAAACCGGGCGATCCGGCTCCGGACTTCCGC
GCATTGTTCGACCGTGCCGGCAATCAGCTAGCGCTGCAGCGGGGTCAACCCATGCAGTGGAACAGCCGCAATCAATTGGA
GTCACTGACCCTGGTGGAACATGCCAGCGGTCCACCTGACCGGGAGCTGTATCAATACAGCCAGGGCGCCAGGGTCTACA
AACGCCTCGAAACCCACACTCGCAAGGTCAGCCATGTCGAGCAAGTGCACTACGTGGGCAATCTGGAGATCCGCAGCAAA
AGCTCGGGTGAAGAGCTGCACCGGATCACCGTAGCCACCGGCGTCGGCGAAGTGACATGCCTGCATTGGGTCGCCGGAAA
ACCGCCCGGCATCGACGCCGATCAGATGCGTTATTCCCTGACGGATCATCTGGGCTCAAGCGTGACCGAGCTCGACCAGA
ACGCGCGACTGATCAGCCAGGAAGGCTATTTCGCCTTCGGCGCAACCGCGTGGATGGTCGCAGACAAACTCGTGGAGGCG
GATTACAAGTTCATCCGCTACTCGGGCAAGGAGATGGAACGCAGCGGGCTTTATCATTATGGGGTGCGGTATTACGCGCC
TTGGCTGGGACGCTGGGTCAGCACTGACCCGACGGGAGATGAGGACGGGCCGAATCGATATGCGTTTGTCGGGAACAGCC
CACTGCGCTACGTGGATCCTGCGGGAGGTACCAGGGCGGAGGCGACCATCATGCTGTACAACAGTTTTGTTTCCCAGGTG
TCCGGGAATGCCGAATACACACTCCACAGGCTGCACAACATCATCAAGCAAAAAGGCTTCACACTAAGCCTGATGGCCAA
CGTGGCGGTCGAAGGCCTGAAAGGTGCAATCGGCTATGAGGCCGGCCTGATCGGCGGCGGACAAATCGACATGGTCATGC
CGGGGTTCCCGACCACTACGCCTTACACCACACCCGGTGGAGTGATCGGCGGCAACATCGGGGGCGATGTGTCGGGAGCG
ATCGCAGACGTACCGTTGAGGAAGATGCCGTTCCATATCGGCCCGCTGATCCCACAGACCTCGAAACTGTCCGTGGCAGC
GATTGACAGCGACCTCGGCATAACGGGTGCCGTCAAGGAAATACGCAACTGGAGCGATTTCAAGGATGAGGTCGTGCATC
CGGCGCTCAACTCGGTGATCAACCCTTACTTCCTGATGAGCAGAGTAATGGGCTCTTGGATATCGATCATCCCCGCCGCT
CTGGAGTTGTTTGCCCGGGCAATCGAGGTTGAGGACATCAAGAATCGCCTTGACCCGGTCAAGATCCAGAAGATCGAAGA
CATGCTCAACGGTTGGCAAACCGCTCTACAGGAACGCTCGACATGGGTCGAGAATGCCTTTGATGCATTAGGCAGCGACG
TGCTCTATCCGGCGGATGTGCTTCCCAACGTCAACATGACGACCTCAAAAGACACGCTGGCACCGATCAGCAGAGCCGGT
TTGCGGCAGCAAACCAGAGCCGTCATGGCGGATATCGCGCACGCCAAAAGAGGACTGGCCTACTACAAGGAGATGGGCAC
CACGGACAATCAATACTTGCTGAGCCAGGCTCATGTTAAATCGCCGTCCCGCAACCGGACCACGTGA

Upstream 100 bases:

>100_bases
TCAAATGCAGCTACGACTTCAATGACACCGGCGACACACCGGCGAGCAAGTCTGCGAAACCCGCCAAACAGCCCGTCAAA
CCTGCGAAGAAAGTCAAGCC

Downstream 100 bases:

>100_bases
AATGGCAAATAGCATTCACCTGCGCACGCCCTCGGTCACTGCCAATGATGGCCGGGGCCTGGCGCTCAGGCAGATTGCCT
ATCTACGCACAGTCCCAGAC

Product: insecticidal toxin protein

Products: NA

Alternate protein names: Insecticidal xin Protein; Insecticidal xin Complex; Insecticidal xin Complex Protein; C Component Of Insecticidal xin Complex; Rhs Family Protein; YD Repeat Protein; Rhs Family Protein-Like Protein; Insecticidal xin; Zinc Finger C2H2-Type Domain-Containing Protein; FG-GAP Repeat Protein; Insecticidal xin SepC/Tcc Class; Insecticial xin; RHS Repeat Family; Integrins Alpha Chain; Insecticidal xin Complex-Like Protein; Insecticial xin Complex; Rhs Core Protein With Extension; Insecticidal xin SepC/TccC; Insecticidal xin Complex Protein TcaC; Insecticidal xin Complex TccC; NHL/RHS/YD Repeat-Containing Protein; Insecticidal xin Complex Protein Tccc

Number of amino acids: Translated: 928; Mature: 928

Protein sequence:

>928_residues
MNASVHWHTPTVAVNGPRGETYRHIDYLRRVAGEDVQALITRQQYDVAGRLVALRDPRLPTPNTTTVHRLDGVAIRTINV
DGGENTVLQGVGGELLQNWDANRNHREMTYDPQLRLRAVTENGAANFETFHYLDASADPTHNLRGQMTALSDPSGTLALD
SFGMHGQTLEETRTFKDGKTCTSRRVFSAVGALLQTTDAGGHLQQSTYDIAGQLVQVQLQLDGQAFQPVLKGADYNAAGQ
ITEQRLGNDVTNRWCYRDTDGRLLRQYAQKASGQAIQDFGYGYDRVGNTTRIVDHTYTPTYFRNQRVDGQRTFDHDTTYQ
LIRATGYSDAPPRDNPGRPQPTDPRDRRNYVETYEYDEGKNLTLLTHVRDGSAHTFEMCIDPGSNRGVRWKPGDPAPDFR
ALFDRAGNQLALQRGQPMQWNSRNQLESLTLVEHASGPPDRELYQYSQGARVYKRLETHTRKVSHVEQVHYVGNLEIRSK
SSGEELHRITVATGVGEVTCLHWVAGKPPGIDADQMRYSLTDHLGSSVTELDQNARLISQEGYFAFGATAWMVADKLVEA
DYKFIRYSGKEMERSGLYHYGVRYYAPWLGRWVSTDPTGDEDGPNRYAFVGNSPLRYVDPAGGTRAEATIMLYNSFVSQV
SGNAEYTLHRLHNIIKQKGFTLSLMANVAVEGLKGAIGYEAGLIGGGQIDMVMPGFPTTTPYTTPGGVIGGNIGGDVSGA
IADVPLRKMPFHIGPLIPQTSKLSVAAIDSDLGITGAVKEIRNWSDFKDEVVHPALNSVINPYFLMSRVMGSWISIIPAA
LELFARAIEVEDIKNRLDPVKIQKIEDMLNGWQTALQERSTWVENAFDALGSDVLYPADVLPNVNMTTSKDTLAPISRAG
LRQQTRAVMADIAHAKRGLAYYKEMGTTDNQYLLSQAHVKSPSRNRTT

Sequences:

>Translated_928_residues
MNASVHWHTPTVAVNGPRGETYRHIDYLRRVAGEDVQALITRQQYDVAGRLVALRDPRLPTPNTTTVHRLDGVAIRTINV
DGGENTVLQGVGGELLQNWDANRNHREMTYDPQLRLRAVTENGAANFETFHYLDASADPTHNLRGQMTALSDPSGTLALD
SFGMHGQTLEETRTFKDGKTCTSRRVFSAVGALLQTTDAGGHLQQSTYDIAGQLVQVQLQLDGQAFQPVLKGADYNAAGQ
ITEQRLGNDVTNRWCYRDTDGRLLRQYAQKASGQAIQDFGYGYDRVGNTTRIVDHTYTPTYFRNQRVDGQRTFDHDTTYQ
LIRATGYSDAPPRDNPGRPQPTDPRDRRNYVETYEYDEGKNLTLLTHVRDGSAHTFEMCIDPGSNRGVRWKPGDPAPDFR
ALFDRAGNQLALQRGQPMQWNSRNQLESLTLVEHASGPPDRELYQYSQGARVYKRLETHTRKVSHVEQVHYVGNLEIRSK
SSGEELHRITVATGVGEVTCLHWVAGKPPGIDADQMRYSLTDHLGSSVTELDQNARLISQEGYFAFGATAWMVADKLVEA
DYKFIRYSGKEMERSGLYHYGVRYYAPWLGRWVSTDPTGDEDGPNRYAFVGNSPLRYVDPAGGTRAEATIMLYNSFVSQV
SGNAEYTLHRLHNIIKQKGFTLSLMANVAVEGLKGAIGYEAGLIGGGQIDMVMPGFPTTTPYTTPGGVIGGNIGGDVSGA
IADVPLRKMPFHIGPLIPQTSKLSVAAIDSDLGITGAVKEIRNWSDFKDEVVHPALNSVINPYFLMSRVMGSWISIIPAA
LELFARAIEVEDIKNRLDPVKIQKIEDMLNGWQTALQERSTWVENAFDALGSDVLYPADVLPNVNMTTSKDTLAPISRAG
LRQQTRAVMADIAHAKRGLAYYKEMGTTDNQYLLSQAHVKSPSRNRTT
>Mature_928_residues
MNASVHWHTPTVAVNGPRGETYRHIDYLRRVAGEDVQALITRQQYDVAGRLVALRDPRLPTPNTTTVHRLDGVAIRTINV
DGGENTVLQGVGGELLQNWDANRNHREMTYDPQLRLRAVTENGAANFETFHYLDASADPTHNLRGQMTALSDPSGTLALD
SFGMHGQTLEETRTFKDGKTCTSRRVFSAVGALLQTTDAGGHLQQSTYDIAGQLVQVQLQLDGQAFQPVLKGADYNAAGQ
ITEQRLGNDVTNRWCYRDTDGRLLRQYAQKASGQAIQDFGYGYDRVGNTTRIVDHTYTPTYFRNQRVDGQRTFDHDTTYQ
LIRATGYSDAPPRDNPGRPQPTDPRDRRNYVETYEYDEGKNLTLLTHVRDGSAHTFEMCIDPGSNRGVRWKPGDPAPDFR
ALFDRAGNQLALQRGQPMQWNSRNQLESLTLVEHASGPPDRELYQYSQGARVYKRLETHTRKVSHVEQVHYVGNLEIRSK
SSGEELHRITVATGVGEVTCLHWVAGKPPGIDADQMRYSLTDHLGSSVTELDQNARLISQEGYFAFGATAWMVADKLVEA
DYKFIRYSGKEMERSGLYHYGVRYYAPWLGRWVSTDPTGDEDGPNRYAFVGNSPLRYVDPAGGTRAEATIMLYNSFVSQV
SGNAEYTLHRLHNIIKQKGFTLSLMANVAVEGLKGAIGYEAGLIGGGQIDMVMPGFPTTTPYTTPGGVIGGNIGGDVSGA
IADVPLRKMPFHIGPLIPQTSKLSVAAIDSDLGITGAVKEIRNWSDFKDEVVHPALNSVINPYFLMSRVMGSWISIIPAA
LELFARAIEVEDIKNRLDPVKIQKIEDMLNGWQTALQERSTWVENAFDALGSDVLYPADVLPNVNMTTSKDTLAPISRAG
LRQQTRAVMADIAHAKRGLAYYKEMGTTDNQYLLSQAHVKSPSRNRTT

Specific function: Rhs Elements Have A Nonessential Function. They May Play An Important Role In The Natural Ecology Of The Cell. [C]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 103021; Mature: 103021

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASVHWHTPTVAVNGPRGETYRHIDYLRRVAGEDVQALITRQQYDVAGRLVALRDPRLP
CCCCEEEECCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEEECCCCC
TPNTTTVHRLDGVAIRTINVDGGENTVLQGVGGELLQNWDANRNHREMTYDPQLRLRAVT
CCCCCEEEEECCEEEEEEECCCCCCCEEECCCHHHHHCCCCCCCCCCCEECCCEEEEEEE
ENGAANFETFHYLDASADPTHNLRGQMTALSDPSGTLALDSFGMHGQTLEETRTFKDGKT
CCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCHHHHHCCCCCCC
CTSRRVFSAVGALLQTTDAGGHLQQSTYDIAGQLVQVQLQLDGQAFQPVLKGADYNAAGQ
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCEEEEEEEEECCHHHHHHHCCCCCCCCCH
ITEQRLGNDVTNRWCYRDTDGRLLRQYAQKASGQAIQDFGYGYDRVGNTTRIVDHTYTPT
HHHHHHCCHHHCCCEEECCCHHHHHHHHHHHCCCCHHHHCCCHHHCCCCEEEEECCCCCC
YFRNQRVDGQRTFDHDTTYQLIRATGYSDAPPRDNPGRPQPTDPRDRRNYVETYEYDEGK
HHCCCCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHCHHHHEEECCCC
NLTLLTHVRDGSAHTFEMCIDPGSNRGVRWKPGDPAPDFRALFDRAGNQLALQRGQPMQW
CEEEEEEECCCCCEEEEEEECCCCCCCEECCCCCCCHHHHHHHHHCCCEEEECCCCCCCC
NSRNQLESLTLVEHASGPPDRELYQYSQGARVYKRLETHTRKVSHVEQVHYVGNLEIRSK
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEECC
SSGEELHRITVATGVGEVTCLHWVAGKPPGIDADQMRYSLTDHLGSSVTELDQNARLISQ
CCCCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCEEEEC
EGYFAFGATAWMVADKLVEADYKFIRYSGKEMERSGLYHYGVRYYAPWLGRWVSTDPTGD
CCCEEECHHHHHHHHHHHHHCHHHEEECCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC
EDGPNRYAFVGNSPLRYVDPAGGTRAEATIMLYNSFVSQVSGNAEYTLHRLHNIIKQKGF
CCCCCEEEEECCCCCEEECCCCCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHCCC
TLSLMANVAVEGLKGAIGYEAGLIGGGQIDMVMPGFPTTTPYTTPGGVIGGNIGGDVSGA
EEEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCH
IADVPLRKMPFHIGPLIPQTSKLSVAAIDSDLGITGAVKEIRNWSDFKDEVVHPALNSVI
HHCCCHHHCCCHHCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
NPYFLMSRVMGSWISIIPAALELFARAIEVEDIKNRLDPVKIQKIEDMLNGWQTALQERS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TWVENAFDALGSDVLYPADVLPNVNMTTSKDTLAPISRAGLRQQTRAVMADIAHAKRGLA
HHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYKEMGTTDNQYLLSQAHVKSPSRNRTT
HHHHCCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNASVHWHTPTVAVNGPRGETYRHIDYLRRVAGEDVQALITRQQYDVAGRLVALRDPRLP
CCCCEEEECCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEEEEECCCCC
TPNTTTVHRLDGVAIRTINVDGGENTVLQGVGGELLQNWDANRNHREMTYDPQLRLRAVT
CCCCCEEEEECCEEEEEEECCCCCCCEEECCCHHHHHCCCCCCCCCCCEECCCEEEEEEE
ENGAANFETFHYLDASADPTHNLRGQMTALSDPSGTLALDSFGMHGQTLEETRTFKDGKT
CCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCHHHHHCCCCCCC
CTSRRVFSAVGALLQTTDAGGHLQQSTYDIAGQLVQVQLQLDGQAFQPVLKGADYNAAGQ
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCEEEEEEEEECCHHHHHHHCCCCCCCCCH
ITEQRLGNDVTNRWCYRDTDGRLLRQYAQKASGQAIQDFGYGYDRVGNTTRIVDHTYTPT
HHHHHHCCHHHCCCEEECCCHHHHHHHHHHHCCCCHHHHCCCHHHCCCCEEEEECCCCCC
YFRNQRVDGQRTFDHDTTYQLIRATGYSDAPPRDNPGRPQPTDPRDRRNYVETYEYDEGK
HHCCCCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHCHHHHEEECCCC
NLTLLTHVRDGSAHTFEMCIDPGSNRGVRWKPGDPAPDFRALFDRAGNQLALQRGQPMQW
CEEEEEEECCCCCEEEEEEECCCCCCCEECCCCCCCHHHHHHHHHCCCEEEECCCCCCCC
NSRNQLESLTLVEHASGPPDRELYQYSQGARVYKRLETHTRKVSHVEQVHYVGNLEIRSK
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEECC
SSGEELHRITVATGVGEVTCLHWVAGKPPGIDADQMRYSLTDHLGSSVTELDQNARLISQ
CCCCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCEEEEC
EGYFAFGATAWMVADKLVEADYKFIRYSGKEMERSGLYHYGVRYYAPWLGRWVSTDPTGD
CCCEEECHHHHHHHHHHHHHCHHHEEECCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC
EDGPNRYAFVGNSPLRYVDPAGGTRAEATIMLYNSFVSQVSGNAEYTLHRLHNIIKQKGF
CCCCCEEEEECCCCCEEECCCCCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHCCC
TLSLMANVAVEGLKGAIGYEAGLIGGGQIDMVMPGFPTTTPYTTPGGVIGGNIGGDVSGA
EEEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCH
IADVPLRKMPFHIGPLIPQTSKLSVAAIDSDLGITGAVKEIRNWSDFKDEVVHPALNSVI
HHCCCHHHCCCHHCCCCCCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
NPYFLMSRVMGSWISIIPAALELFARAIEVEDIKNRLDPVKIQKIEDMLNGWQTALQERS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
TWVENAFDALGSDVLYPADVLPNVNMTTSKDTLAPISRAGLRQQTRAVMADIAHAKRGLA
HHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYKEMGTTDNQYLLSQAHVKSPSRNRTT
HHHHCCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA