| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460654
Identifier: 77460654
GI number: 77460654
Start: 4993890
End: 4994666
Strand: Direct
Name: 77460654
Synonym: Pfl01_4433
Alternate gene names: NA
Gene position: 4993890-4994666 (Clockwise)
Preceding gene: 77460653
Following gene: 77460655
Centisome position: 77.56
GC content: 63.84
Gene sequence:
>777_bases ATGGCTGAATCTCACGAGCGCCCGACGTTAATGCTGGTGCTGCATGACGTGGCACCCTCCACGTGGGCCGATTATCGAGA ATTTGTCGAAGCCGTTGACCGGTTGGGCAACGTCCCGATGACGTGGCTGGTGGTCCCGAATTTCCATCGACACGATGCCC TCGAGGCCCACCCGGAGTTCTGTCGAATGCTCGACGAGCGCGTCGCCCGCGGCGATGAACTGGCGCTGCACGGCCATTTC CATGAAGACACCGAGCCCGGCCCGCGTACAGCGCGCGACTGGTTCATGCGTCGGGTCTACACCCATGAAGGCGAGTTCTA TCAGCTGTCCCGTGAAGCCGCCCTCGCCCGCCTGCGCCCGGGCATCGATCTGTTTCGGCGCCACGGCTGGCCACTGCATG GTTTCGTTGCCCCGGCCTGGCTGATGAGCGCCGGCACACGCCAGGCATTGCGCGAATTGCCACTGCGCTACACCAGCGAT CCGCAGCATCTTTATCACTTGCCGGATTTCACTGCGGTCGAGGCTCCGGGACTGGTCTGGAGCGCACGCAGCGCCTGGCG TCGCGGCATGTCGAAGGTCATCAGCGAACAGCGTGAGCAGCGCTGGCGTCAGGCGCCGGTGATTCGTCTAGGCTTGCACC CGGTGGACATGCGCCACCGGTTTTCCCGGGATTACTGGTGGCGCACCCTTGAACGACTATTGGCGGACGGACGCGTGCCC ATGACCAAAATCGACTGGCTGACGCGCCAGCGCATTCAAGCCGAGCGTGCCGCTTGA
Upstream 100 bases:
>100_bases CGCCAGCACGTGGAGCGGCATTACGCCTGGAACACGGTGGTCGACAGCCTGCTGGGCCACTACCACGCCGTACTCGGCGA ATCGGTTCCGCGGGTGGCCA
Downstream 100 bases:
>100_bases GTCGCGGCATTCTGTTGCTGATCGGCCTGCTGGTGGCCGTGGCGGTTCCCGTCCTGCTCGGGGGCGGCGAAACCTGGGAG CGCCTGCAGGCATTTCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Deacetylase-Like Protein
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MAESHERPTLMLVLHDVAPSTWADYREFVEAVDRLGNVPMTWLVVPNFHRHDALEAHPEFCRMLDERVARGDELALHGHF HEDTEPGPRTARDWFMRRVYTHEGEFYQLSREAALARLRPGIDLFRRHGWPLHGFVAPAWLMSAGTRQALRELPLRYTSD PQHLYHLPDFTAVEAPGLVWSARSAWRRGMSKVISEQREQRWRQAPVIRLGLHPVDMRHRFSRDYWWRTLERLLADGRVP MTKIDWLTRQRIQAERAA
Sequences:
>Translated_258_residues MAESHERPTLMLVLHDVAPSTWADYREFVEAVDRLGNVPMTWLVVPNFHRHDALEAHPEFCRMLDERVARGDELALHGHF HEDTEPGPRTARDWFMRRVYTHEGEFYQLSREAALARLRPGIDLFRRHGWPLHGFVAPAWLMSAGTRQALRELPLRYTSD PQHLYHLPDFTAVEAPGLVWSARSAWRRGMSKVISEQREQRWRQAPVIRLGLHPVDMRHRFSRDYWWRTLERLLADGRVP MTKIDWLTRQRIQAERAA >Mature_257_residues AESHERPTLMLVLHDVAPSTWADYREFVEAVDRLGNVPMTWLVVPNFHRHDALEAHPEFCRMLDERVARGDELALHGHFH EDTEPGPRTARDWFMRRVYTHEGEFYQLSREAALARLRPGIDLFRRHGWPLHGFVAPAWLMSAGTRQALRELPLRYTSDP QHLYHLPDFTAVEAPGLVWSARSAWRRGMSKVISEQREQRWRQAPVIRLGLHPVDMRHRFSRDYWWRTLERLLADGRVPM TKIDWLTRQRIQAERAA
Specific function: Unknown
COG id: COG3233
COG function: function code R; Predicted deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30475; Mature: 30344
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESHERPTLMLVLHDVAPSTWADYREFVEAVDRLGNVPMTWLVVPNFHRHDALEAHPEF CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCHHH CRMLDERVARGDELALHGHFHEDTEPGPRTARDWFMRRVYTHEGEFYQLSREAALARLRP HHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC GIDLFRRHGWPLHGFVAPAWLMSAGTRQALRELPLRYTSDPQHLYHLPDFTAVEAPGLVW CHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCCCCCCCH SARSAWRRGMSKVISEQREQRWRQAPVIRLGLHPVDMRHRFSRDYWWRTLERLLADGRVP HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCC MTKIDWLTRQRIQAERAA CHHHHHHHHHHHHHHHCC >Mature Secondary Structure AESHERPTLMLVLHDVAPSTWADYREFVEAVDRLGNVPMTWLVVPNFHRHDALEAHPEF CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCHHH CRMLDERVARGDELALHGHFHEDTEPGPRTARDWFMRRVYTHEGEFYQLSREAALARLRP HHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC GIDLFRRHGWPLHGFVAPAWLMSAGTRQALRELPLRYTSDPQHLYHLPDFTAVEAPGLVW CHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCCCCCCCH SARSAWRRGMSKVISEQREQRWRQAPVIRLGLHPVDMRHRFSRDYWWRTLERLLADGRVP HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCC MTKIDWLTRQRIQAERAA CHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA