| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ypeB [C]
Identifier: 77460579
GI number: 77460579
Start: 4911258
End: 4911494
Strand: Direct
Name: ypeB [C]
Synonym: Pfl01_4358
Alternate gene names: 77460579
Gene position: 4911258-4911494 (Clockwise)
Preceding gene: 77460577
Following gene: 77460580
Centisome position: 76.28
GC content: 60.34
Gene sequence:
>237_bases ATGAACCCTGAAAAGCTCGAACTGCTGATCACCCGCGAAATGCCCTTCGGCAAATACAAGGGCCGGATCATTGCCGACCT GCCGGGCCCGTACCTGAACTGGTTTGCCCGGGAAGGATTTCCCCATGGCGAACTGGGCGGGCTGTTGGCGTTGATGCAGG AAATCGATCACAACGGCCTGTCGGAACTGCTCGAACCGCTGCGCGCCAAACACGGCAAACCTGCCCCGCGCCACTGA
Upstream 100 bases:
>100_bases CAGAAATCTGTATGCCTGTTATTTGCATGATCTGTCATTTGGCCTGCATGCAGAATGCCTGTATTTTCCGAAGTGTTTTC AAAGCCAGACGATTCCAACG
Downstream 100 bases:
>100_bases GGCGTCACCCTGATCCGAGTCGAGTCGACCATGCCCGATAACACCCGCCGCGCCCGAGACGAAGCTTTCTGGCAAACCTT CGCCGACCGTTACGACCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MNPEKLELLITREMPFGKYKGRIIADLPGPYLNWFAREGFPHGELGGLLALMQEIDHNGLSELLEPLRAKHGKPAPRH
Sequences:
>Translated_78_residues MNPEKLELLITREMPFGKYKGRIIADLPGPYLNWFAREGFPHGELGGLLALMQEIDHNGLSELLEPLRAKHGKPAPRH >Mature_78_residues MNPEKLELLITREMPFGKYKGRIIADLPGPYLNWFAREGFPHGELGGLLALMQEIDHNGLSELLEPLRAKHGKPAPRH
Specific function: Unknown
COG id: COG3530
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082098, Length=69, Percent_Identity=47.8260869565217, Blast_Score=62, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8827; Mature: 8827
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPEKLELLITREMPFGKYKGRIIADLPGPYLNWFAREGFPHGELGGLLALMQEIDHNGL CCCCCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCH SELLEPLRAKHGKPAPRH HHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNPEKLELLITREMPFGKYKGRIIADLPGPYLNWFAREGFPHGELGGLLALMQEIDHNGL CCCCCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCH SELLEPLRAKHGKPAPRH HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA