| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is zntB [H]
Identifier: 77460539
GI number: 77460539
Start: 4874094
End: 4875116
Strand: Direct
Name: zntB [H]
Synonym: Pfl01_4318
Alternate gene names: 77460539
Gene position: 4874094-4875116 (Clockwise)
Preceding gene: 77460536
Following gene: 77460540
Centisome position: 75.7
GC content: 62.85
Gene sequence:
>1023_bases ATGAACCACAGCCTCGATATCAGCCATCGTGATCCTGACCTGTTCGGCCTGCTTTACGGCTTTCGCTTTCGCCCCGGCGA ACGCGGGCGCGAGGTGGATTCGGCGACCGCCCTGCGCTGCCTGCAAGACGACAGCGAGGGCGATGAATTTCTCTGGCTGC ACCTGAACCTGGCCCACGCCGCGTGCGAGCGCTGGATGAAAAGCCATCTGCAACTGCCCGAAGAGTTTTTCGAAGCGCTG CACGAAGGTTCGCGCTCGACCCGCATCGAGCATGTCGATTCGGCGTTGCTGGCGGTGGTCAACGACGTGGTGTTCAACCT CAGCAGCATGGTGTCGTCGGACGTGTCGACGCTGTGGGTCTGCGTGCGCAGCAAACTGATCGTCAGCGCGCGTCTGCAAC CGCTGCATTCGGTGGACAAGCTGCGTTCTTCGGTGAAGGCCGGCGAGTGCTTTCGCTCGCCGTCGGAACTGCTGGTGCAC CTGCTGCGCGATCAGGGCGAAGTGCTGACGCAGATCGTGCGCAAGACCAGCATGAGCGTCGATCAGGTCGAGGACGAGTT GCTGTCTTCACGACTGTCGACCAACCGCGCCGAACTCGGTGCCAACCGGCGGGTGCTGGTGCGCCTGCAACGGCTGCTGG CGCTGGAGCCGGGTTCGCTGCTGCGCCTGCTCAACCGGCCGCCGCCGTGGTTGCAGAAGGAAGACGTGAAGGAGCTGCGC AAATCCACCGAGGAGTTCGCGCTGATCATCAACGACCTGACCGCCCTCGGCGAGCGGATCAAGCTGTTGCAGGAAGAGAT CGCCGCCAACCTCAATGAACAGAGCAACCGCACGCTGTTCACCCTGACCGTGGTCACGGTGCTGGCGCTGCCGATCAATA TCATTGCCGGTTTCTTCGGCATGAACGTCGGCGGCGTGCCGCTGGCCACTGATCCGGAGGGGTTCTGGATTCTGGTAGCG CTGGTGGCGACGTTTACCGTGATCGCCGGGCGCTGGGCGTTTCGCAAGCGGCGGGATTATTAA
Upstream 100 bases:
>100_bases CGTCATTTTGCTGTCACACAAGCGTCATGTGAGATTGCGATGATGCGGCTCAGGTGAATCTGCAAATCCCGCGACAGACG CCTTTTCGCAGCGAGCCTTC
Downstream 100 bases:
>100_bases GACCGGCGGCGCGACTAATCCGCCAAACACTGATCTGTCGCAGCCTCTCTGTAATATTTAGCAACGATCATGGGCAACAC TCCTTCCCCCGTTCAGGATT
Product: CorA-like Mg2+ transporter protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MNHSLDISHRDPDLFGLLYGFRFRPGERGREVDSATALRCLQDDSEGDEFLWLHLNLAHAACERWMKSHLQLPEEFFEAL HEGSRSTRIEHVDSALLAVVNDVVFNLSSMVSSDVSTLWVCVRSKLIVSARLQPLHSVDKLRSSVKAGECFRSPSELLVH LLRDQGEVLTQIVRKTSMSVDQVEDELLSSRLSTNRAELGANRRVLVRLQRLLALEPGSLLRLLNRPPPWLQKEDVKELR KSTEEFALIINDLTALGERIKLLQEEIAANLNEQSNRTLFTLTVVTVLALPINIIAGFFGMNVGGVPLATDPEGFWILVA LVATFTVIAGRWAFRKRRDY
Sequences:
>Translated_340_residues MNHSLDISHRDPDLFGLLYGFRFRPGERGREVDSATALRCLQDDSEGDEFLWLHLNLAHAACERWMKSHLQLPEEFFEAL HEGSRSTRIEHVDSALLAVVNDVVFNLSSMVSSDVSTLWVCVRSKLIVSARLQPLHSVDKLRSSVKAGECFRSPSELLVH LLRDQGEVLTQIVRKTSMSVDQVEDELLSSRLSTNRAELGANRRVLVRLQRLLALEPGSLLRLLNRPPPWLQKEDVKELR KSTEEFALIINDLTALGERIKLLQEEIAANLNEQSNRTLFTLTVVTVLALPINIIAGFFGMNVGGVPLATDPEGFWILVA LVATFTVIAGRWAFRKRRDY >Mature_340_residues MNHSLDISHRDPDLFGLLYGFRFRPGERGREVDSATALRCLQDDSEGDEFLWLHLNLAHAACERWMKSHLQLPEEFFEAL HEGSRSTRIEHVDSALLAVVNDVVFNLSSMVSSDVSTLWVCVRSKLIVSARLQPLHSVDKLRSSVKAGECFRSPSELLVH LLRDQGEVLTQIVRKTSMSVDQVEDELLSSRLSTNRAELGANRRVLVRLQRLLALEPGSLLRLLNRPPPWLQKEDVKELR KSTEEFALIINDLTALGERIKLLQEEIAANLNEQSNRTLFTLTVVTVLALPINIIAGFFGMNVGGVPLATDPEGFWILVA LVATFTVIAGRWAFRKRRDY
Specific function: Mediates efflux of zinc ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI1787604, Length=287, Percent_Identity=22.6480836236934, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 38386; Mature: 38386
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHSLDISHRDPDLFGLLYGFRFRPGERGREVDSATALRCLQDDSEGDEFLWLHLNLAHA CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHH ACERWMKSHLQLPEEFFEALHEGSRSTRIEHVDSALLAVVNDVVFNLSSMVSSDVSTLWV HHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CVRSKLIVSARLQPLHSVDKLRSSVKAGECFRSPSELLVHLLRDQGEVLTQIVRKTSMSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCH DQVEDELLSSRLSTNRAELGANRRVLVRLQRLLALEPGSLLRLLNRPPPWLQKEDVKELR HHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHH KSTEEFALIINDLTALGERIKLLQEEIAANLNEQSNRTLFTLTVVTVLALPINIIAGFFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH MNVGGVPLATDPEGFWILVALVATFTVIAGRWAFRKRRDY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNHSLDISHRDPDLFGLLYGFRFRPGERGREVDSATALRCLQDDSEGDEFLWLHLNLAHA CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHH ACERWMKSHLQLPEEFFEALHEGSRSTRIEHVDSALLAVVNDVVFNLSSMVSSDVSTLWV HHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CVRSKLIVSARLQPLHSVDKLRSSVKAGECFRSPSELLVHLLRDQGEVLTQIVRKTSMSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCH DQVEDELLSSRLSTNRAELGANRRVLVRLQRLLALEPGSLLRLLNRPPPWLQKEDVKELR HHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHH KSTEEFALIINDLTALGERIKLLQEEIAANLNEQSNRTLFTLTVVTVLALPINIIAGFFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH MNVGGVPLATDPEGFWILVALVATFTVIAGRWAFRKRRDY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA