| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460521
Identifier: 77460521
GI number: 77460521
Start: 4857931
End: 4858746
Strand: Reverse
Name: 77460521
Synonym: Pfl01_4300
Alternate gene names: NA
Gene position: 4858746-4857931 (Counterclockwise)
Preceding gene: 77460525
Following gene: 77460520
Centisome position: 75.47
GC content: 61.15
Gene sequence:
>816_bases ATGCTCTACTTCCTGCTGACACTCTTCGGCTGCCTGACCGGCGTCACCGCCGTGCTCTTCGGCTTCGGCGGCGGCTTCGT CGTCGTGCCGCTGCTATACCGCATGCTCACCGCAAGCCATGGCGCCGACGACCCGATCAGCCAATCCGCCATGCACATCG CCGTCGCCACCTCGACCTGCGTGATGATCGTCAACGCCCTGGTCGCCACTGGCAAACATCGCCGCGCCGGCAACCTCATC CGTGATTACCTGTGGCCCTTGGGCGGATTCATCGGAATGGGCGCGGTCGTCGGTGCAATCGCAGCGGTGTGGGTCAGCGG CGAAGTCATTCGTTATGCCTTCATCGCCTACCTCGGCGTGACGATTGTCGATTGCCTGCTGCGACGCGGATTTCTTACGC AGTCCGAAGGCGCCATCCCACGGCGATTGGGAACACTGGAAACGTCTGGCGGCGGTGTAGGCATTGGCACCATCGCAACC TTTCTCGGTGTAGGAGGAAGCGTCATGACCGTGCCGTTATTGCGGCGTTGCGGTTTGAGCATGTCGCAGGCGACGTCGAT GGCCAATCCGTTGAGCGTGCCTGTGGCGTTGGCGGGAACCCTGACGTACATGGCGATGGCGGGACTCAGCGAGACAAAAT TTGGGCCATGGTTTATCGGGTATGTAGATCTGCTGGCGTTCGCAGTGCTGACGTTGGGCTCGATGCTGGGGATTCGACTG GCCACACGGTGGATCGGGCGGATAGCGGATCGGGTGCATGCGTGGGTGTATATCGCGCTACTCATCATCGTGATGCTGGG CATGACACTGAAGTAG
Upstream 100 bases:
>100_bases AGCAGTTGGCGTAAACGCAAACATTATTGGCTGACTTGCTGAAGCAGGCCAAGCGCCGCCGCTCTATCGTCGACCGCTCT CAAACAACGGACGACGCGCC
Downstream 100 bases:
>100_bases CACCTCGATTCCTGCGCGCATCCTCTGCATACTCCGCAGCCTTATTCACTCAGGGATCGATCCATGCTCAAGGGACTGTT GCGCCTGGCGCCATACACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MLYFLLTLFGCLTGVTAVLFGFGGGFVVVPLLYRMLTASHGADDPISQSAMHIAVATSTCVMIVNALVATGKHRRAGNLI RDYLWPLGGFIGMGAVVGAIAAVWVSGEVIRYAFIAYLGVTIVDCLLRRGFLTQSEGAIPRRLGTLETSGGGVGIGTIAT FLGVGGSVMTVPLLRRCGLSMSQATSMANPLSVPVALAGTLTYMAMAGLSETKFGPWFIGYVDLLAFAVLTLGSMLGIRL ATRWIGRIADRVHAWVYIALLIIVMLGMTLK
Sequences:
>Translated_271_residues MLYFLLTLFGCLTGVTAVLFGFGGGFVVVPLLYRMLTASHGADDPISQSAMHIAVATSTCVMIVNALVATGKHRRAGNLI RDYLWPLGGFIGMGAVVGAIAAVWVSGEVIRYAFIAYLGVTIVDCLLRRGFLTQSEGAIPRRLGTLETSGGGVGIGTIAT FLGVGGSVMTVPLLRRCGLSMSQATSMANPLSVPVALAGTLTYMAMAGLSETKFGPWFIGYVDLLAFAVLTLGSMLGIRL ATRWIGRIADRVHAWVYIALLIIVMLGMTLK >Mature_271_residues MLYFLLTLFGCLTGVTAVLFGFGGGFVVVPLLYRMLTASHGADDPISQSAMHIAVATSTCVMIVNALVATGKHRRAGNLI RDYLWPLGGFIGMGAVVGAIAAVWVSGEVIRYAFIAYLGVTIVDCLLRRGFLTQSEGAIPRRLGTLETSGGGVGIGTIAT FLGVGGSVMTVPLLRRCGLSMSQATSMANPLSVPVALAGTLTYMAMAGLSETKFGPWFIGYVDLLAFAVLTLGSMLGIRL ATRWIGRIADRVHAWVYIALLIIVMLGMTLK
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28597; Mature: 28597
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYFLLTLFGCLTGVTAVLFGFGGGFVVVPLLYRMLTASHGADDPISQSAMHIAVATSTC CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VMIVNALVATGKHRRAGNLIRDYLWPLGGFIGMGAVVGAIAAVWVSGEVIRYAFIAYLGV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIVDCLLRRGFLTQSEGAIPRRLGTLETSGGGVGIGTIATFLGVGGSVMTVPLLRRCGLS HHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC MSQATSMANPLSVPVALAGTLTYMAMAGLSETKFGPWFIGYVDLLAFAVLTLGSMLGIRL HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ATRWIGRIADRVHAWVYIALLIIVMLGMTLK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLYFLLTLFGCLTGVTAVLFGFGGGFVVVPLLYRMLTASHGADDPISQSAMHIAVATSTC CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VMIVNALVATGKHRRAGNLIRDYLWPLGGFIGMGAVVGAIAAVWVSGEVIRYAFIAYLGV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIVDCLLRRGFLTQSEGAIPRRLGTLETSGGGVGIGTIATFLGVGGSVMTVPLLRRCGLS HHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCC MSQATSMANPLSVPVALAGTLTYMAMAGLSETKFGPWFIGYVDLLAFAVLTLGSMLGIRL HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ATRWIGRIADRVHAWVYIALLIIVMLGMTLK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA