| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460517
Identifier: 77460517
GI number: 77460517
Start: 4854202
End: 4854732
Strand: Direct
Name: 77460517
Synonym: Pfl01_4296
Alternate gene names: NA
Gene position: 4854202-4854732 (Clockwise)
Preceding gene: 77460516
Following gene: 77460518
Centisome position: 75.39
GC content: 53.3
Gene sequence:
>531_bases ATGCCCGATCCTTTTTCTGTAACAGTCTTCTCCCGTCACAACCTCGCACTACACGCCCTTCTACTCGAAAACCAAACGTG GTTCTGCGCCCGCGATGTCGGCCGCTTGATGGGGTTCCATCTGTGCGAACGCATGGTCAACAAGCTAGATAAGGATCAAC GTCGCGTTTTGTGGATTGAGTATTTTCGGCAACCCGAAAAGCAATTGATGCTCAGCGAATCAGGTGTGTATGCGCTGCTT GTGTACCACTACGTTCCGGGGAACCGGTTGTTGCGAGAGTGGTTGACTCTGCAAGTGGTGCCGGCCTTGCGCGATGCAGA GCACTCAGGACATTCGGAACGACCGATGTTGAGTTTGTTGGATTGGCCGGAGATGTCGTTGAGCTTGCTTCATTGGCAGG ATGAAGGCTGGATTCGACTGCGGGATATGCCTTATCTGCTGAACGATCAGACGCAACGACGGACACCGGGGAAGCCTTGG TGGAGAAAGGTTGTGCAGGTGTTTCAGGCTTCAAAGCATTCGATGGGCTAG
Upstream 100 bases:
>100_bases CATATGCCGTCAGTGGAGCTGCCTCGCTCGTTGGGATTTCTTAAGTCCACTCTACGTTGGGGCCAGGCCCTCCAAAATTC TGAACGTAGAGGTAATGGAT
Downstream 100 bases:
>100_bases TGATGGTGGTCGTAGGACCTTGCAAGATCCGTCGATATTTTCTGTAGGAATTTTCGTAGACAGCTGTGGTGGCCACTCAG TATCGTCCGAGGGTTTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MPDPFSVTVFSRHNLALHALLLENQTWFCARDVGRLMGFHLCERMVNKLDKDQRRVLWIEYFRQPEKQLMLSESGVYALL VYHYVPGNRLLREWLTLQVVPALRDAEHSGHSERPMLSLLDWPEMSLSLLHWQDEGWIRLRDMPYLLNDQTQRRTPGKPW WRKVVQVFQASKHSMG
Sequences:
>Translated_176_residues MPDPFSVTVFSRHNLALHALLLENQTWFCARDVGRLMGFHLCERMVNKLDKDQRRVLWIEYFRQPEKQLMLSESGVYALL VYHYVPGNRLLREWLTLQVVPALRDAEHSGHSERPMLSLLDWPEMSLSLLHWQDEGWIRLRDMPYLLNDQTQRRTPGKPW WRKVVQVFQASKHSMG >Mature_175_residues PDPFSVTVFSRHNLALHALLLENQTWFCARDVGRLMGFHLCERMVNKLDKDQRRVLWIEYFRQPEKQLMLSESGVYALLV YHYVPGNRLLREWLTLQVVPALRDAEHSGHSERPMLSLLDWPEMSLSLLHWQDEGWIRLRDMPYLLNDQTQRRTPGKPWW RKVVQVFQASKHSMG
Specific function: Unknown
COG id: COG3617
COG function: function code K; Prophage antirepressor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20966; Mature: 20834
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPFSVTVFSRHNLALHALLLENQTWFCARDVGRLMGFHLCERMVNKLDKDQRRVLWIE CCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH YFRQPEKQLMLSESGVYALLVYHYVPGNRLLREWLTLQVVPALRDAEHSGHSERPMLSLL HHHCHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHC DWPEMSLSLLHWQDEGWIRLRDMPYLLNDQTQRRTPGKPWWRKVVQVFQASKHSMG CCCCCCEEEEEECCCCEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PDPFSVTVFSRHNLALHALLLENQTWFCARDVGRLMGFHLCERMVNKLDKDQRRVLWIE CCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH YFRQPEKQLMLSESGVYALLVYHYVPGNRLLREWLTLQVVPALRDAEHSGHSERPMLSLL HHHCHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHC DWPEMSLSLLHWQDEGWIRLRDMPYLLNDQTQRRTPGKPWWRKVVQVFQASKHSMG CCCCCCEEEEEECCCCEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA