| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460510
Identifier: 77460510
GI number: 77460510
Start: 4845447
End: 4846571
Strand: Reverse
Name: 77460510
Synonym: Pfl01_4289
Alternate gene names: NA
Gene position: 4846571-4845447 (Counterclockwise)
Preceding gene: 77460511
Following gene: 77460509
Centisome position: 75.28
GC content: 63.82
Gene sequence:
>1125_bases ATGGAACGCATCGACCACGTTCTGCCGTGGAGCCACCTGGGCAGCGAGCGCCGGATTTCGGTGTTCAGCTTTGGAAATAG AGAGCGCAGTGGTGGGCGCAAGGCCTACATCCAGGCCAGCCTCCACGCCGACGAACTGCCCGGCATGCGCACTGCCTGGG AACTGAAAAAGCGCCTCGGTGAACTCGAAGCCAAGGGCCTGCTCAACGGCGTCATCGAACTGGTTCCTGTGGCCAACCCG CTGGGTCTTGGCCAGTTGCTGCAAGGCAATCACCAGGGTCGTTTCGAGGCCGGCAGCGGCAAGAATTTCAACCGTGATTT CGTCGAGCTCAGCGCCCCCGTGGCCGCCAGGCTGGAAGGACAACTCGGTGATGATCCGCACGCCAACATCCGTCTGATCC GTCAGGCGATGGCCGACCATCTGGCCGAATTACCTGAGGCGAGTAGCCAGTTGCAAGGCATGCAGCGCATCCTGCTGCAA CACGCCGCCACCGCCGATGTGGTGCTGGATCTGCATTGCGATTGTGAAGCCGCGCTGCACATGTACGCCTTGCCGCAGCA CTGGCCGCAGTGGCGTTCGCTCGCCGCGCACCTGGATGTGAAGGTCGGCCTGCTGGCAGAAGATTCCGGCGGCAGCTCGT TCGACGAAGCCTGTTCGCTGCCGTGGCTGCGTCTGTCGCGCCTGTTCCCGGATGCGCAGATTCCACTGGCGTGCCTGGCA ACCACTGTTGAACTCGGTGGTCAGGCTGACACCACGCCGGCGCAGGCCGAAGCCTGGGCCGAAGGCATTCTGGCGTTCCT CGCCGAGCAGGGCCTGATCCGTGGCGAGTGGCCGAGCGCGGCGCACGAACCATGCGAAGGCATGCCGTTCGAAGGCACCG AAATGCTCCTGCCGCCGCATCCCGGCGTGGTGAGTTTTCTGCGCAAGCCCGGCGAGTGGGTTGAAGCCGGTGACAAGATT TTCGAAGTGATCGATCCGCTGTCGGATCGGGTCAGCACGGTGTGTGCTGGTACGTCCGGGGTGCTGTTTGCCATTGAGCG GCTGCGTTACGCCCAACCCGGTTTCTGGCTGGCCAAAGTGGCGGGGCGCGATGCGCTGCGCGACGGCCCTTTGCTCAACG ACTGA
Upstream 100 bases:
>100_bases GCCGGCGTGTTCTACCTGTGCCTGACCTTCATTCTGGTGCGCCTGTTCAAGCTGGCCGAGCGTCGCTGGCTGAGCTACCT GGCCCCGAGGAAGCACTGAT
Downstream 100 bases:
>100_bases CTGTTTTTGTGAGAACCGACCGCATGTACAAACTTGAAGTCCAAGACCTGCATAAACGCTATGGCAGTCACGAAGTGCTC AAGGGCGTTTCCCTGAAAGC
Product: succinylglutamate desuccinylase/aspartoacylase
Products: NA
Alternate protein names: Deacylase; Arginine Catabolism Protein; Succinylglutamate Desuccinylase; Amino Acid ABC Transporter-Like Protein; Arginine/Ornithine Transport Operon(AotO) Protein; Succinylglutamate Desuccinylase / Aspartoacylase Family
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MERIDHVLPWSHLGSERRISVFSFGNRERSGGRKAYIQASLHADELPGMRTAWELKKRLGELEAKGLLNGVIELVPVANP LGLGQLLQGNHQGRFEAGSGKNFNRDFVELSAPVAARLEGQLGDDPHANIRLIRQAMADHLAELPEASSQLQGMQRILLQ HAATADVVLDLHCDCEAALHMYALPQHWPQWRSLAAHLDVKVGLLAEDSGGSSFDEACSLPWLRLSRLFPDAQIPLACLA TTVELGGQADTTPAQAEAWAEGILAFLAEQGLIRGEWPSAAHEPCEGMPFEGTEMLLPPHPGVVSFLRKPGEWVEAGDKI FEVIDPLSDRVSTVCAGTSGVLFAIERLRYAQPGFWLAKVAGRDALRDGPLLND
Sequences:
>Translated_374_residues MERIDHVLPWSHLGSERRISVFSFGNRERSGGRKAYIQASLHADELPGMRTAWELKKRLGELEAKGLLNGVIELVPVANP LGLGQLLQGNHQGRFEAGSGKNFNRDFVELSAPVAARLEGQLGDDPHANIRLIRQAMADHLAELPEASSQLQGMQRILLQ HAATADVVLDLHCDCEAALHMYALPQHWPQWRSLAAHLDVKVGLLAEDSGGSSFDEACSLPWLRLSRLFPDAQIPLACLA TTVELGGQADTTPAQAEAWAEGILAFLAEQGLIRGEWPSAAHEPCEGMPFEGTEMLLPPHPGVVSFLRKPGEWVEAGDKI FEVIDPLSDRVSTVCAGTSGVLFAIERLRYAQPGFWLAKVAGRDALRDGPLLND >Mature_374_residues MERIDHVLPWSHLGSERRISVFSFGNRERSGGRKAYIQASLHADELPGMRTAWELKKRLGELEAKGLLNGVIELVPVANP LGLGQLLQGNHQGRFEAGSGKNFNRDFVELSAPVAARLEGQLGDDPHANIRLIRQAMADHLAELPEASSQLQGMQRILLQ HAATADVVLDLHCDCEAALHMYALPQHWPQWRSLAAHLDVKVGLLAEDSGGSSFDEACSLPWLRLSRLFPDAQIPLACLA TTVELGGQADTTPAQAEAWAEGILAFLAEQGLIRGEWPSAAHEPCEGMPFEGTEMLLPPHPGVVSFLRKPGEWVEAGDKI FEVIDPLSDRVSTVCAGTSGVLFAIERLRYAQPGFWLAKVAGRDALRDGPLLND
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40778; Mature: 40778
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERIDHVLPWSHLGSERRISVFSFGNRERSGGRKAYIQASLHADELPGMRTAWELKKRLG CCCHHHCCCHHHCCCCCEEEEEECCCCCCCCCCEEEEEEECCHHHCCCCHHHHHHHHHHH ELEAKGLLNGVIELVPVANPLGLGQLLQGNHQGRFEAGSGKNFNRDFVELSAPVAARLEG HHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEECCCCCCCCCHHHHHCCCHHHHHCC QLGDDPHANIRLIRQAMADHLAELPEASSQLQGMQRILLQHAATADVVLDLHCDCEAALH CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHH MYALPQHWPQWRSLAAHLDVKVGLLAEDSGGSSFDEACSLPWLRLSRLFPDAQIPLACLA HHHCCCCCHHHHHHHHHCCEEEEEEEECCCCCCHHHHHCCHHHHHHHHCCCCCCCHHHHH TTVELGGQADTTPAQAEAWAEGILAFLAEQGLIRGEWPSAAHEPCEGMPFEGTEMLLPPH HHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC PGVVSFLRKPGEWVEAGDKIFEVIDPLSDRVSTVCAGTSGVLFAIERLRYAQPGFWLAKV CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHH AGRDALRDGPLLND HCCHHHCCCCCCCC >Mature Secondary Structure MERIDHVLPWSHLGSERRISVFSFGNRERSGGRKAYIQASLHADELPGMRTAWELKKRLG CCCHHHCCCHHHCCCCCEEEEEECCCCCCCCCCEEEEEEECCHHHCCCCHHHHHHHHHHH ELEAKGLLNGVIELVPVANPLGLGQLLQGNHQGRFEAGSGKNFNRDFVELSAPVAARLEG HHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEECCCCCCCCCHHHHHCCCHHHHHCC QLGDDPHANIRLIRQAMADHLAELPEASSQLQGMQRILLQHAATADVVLDLHCDCEAALH CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHH MYALPQHWPQWRSLAAHLDVKVGLLAEDSGGSSFDEACSLPWLRLSRLFPDAQIPLACLA HHHCCCCCHHHHHHHHHCCEEEEEEEECCCCCCHHHHHCCHHHHHHHHCCCCCCCHHHHH TTVELGGQADTTPAQAEAWAEGILAFLAEQGLIRGEWPSAAHEPCEGMPFEGTEMLLPPH HHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC PGVVSFLRKPGEWVEAGDKIFEVIDPLSDRVSTVCAGTSGVLFAIERLRYAQPGFWLAKV CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHH AGRDALRDGPLLND HCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA