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The map label for this gene is occM [H]

Identifier: 77460511

GI number: 77460511

Start: 4846573

End: 4847271

Strand: Reverse

Name: occM [H]

Synonym: Pfl01_4290

Alternate gene names: 77460511

Gene position: 4847271-4846573 (Counterclockwise)

Preceding gene: 77460512

Following gene: 77460510

Centisome position: 75.29

GC content: 62.95

Gene sequence:

>699_bases
ATGATCTTCGACTACAACGTCATTTGGGAGGCCCTGCCGCTGTACTTCGGCGGTCTGGTCACGACCCTCAAGTTGCTCGC
GCTGTCGCTGTTCTTCGGTCTGCTCGCGGCCCTGCCGCTGGGGCTGATGCGCGTATCCAAGAACGCTGTGGTCAATGGCG
CAGCCTGGCTCTACACCTACGTGATTCGCGGCACGCCGATGCTGGTTCAACTGTTCCTGATCTACTACGGTCTGGCCCAG
TTCGAAGCGGTGCGCGAGAGCTTCCTCTGGCCGTGGCTGTCCAGCGCAACGTTCTGTGCGTGCCTGGCGTTCGCGATCAA
CACCAGCGCCTACACCGCCGAAATCATCGCCGGCAGCCTGAAGGCCACGCCGAACGGCGAGATCGAAGCGGCCAAGGCCA
TGGGCATGTCGCGCGTCAAGATGTACAAGCGCATCCTGCTGCCATCGGCCCTGCGCCGGGCGCTGCCGCAGTACAGCAAC
GAAGTGATCATGATGCTGCAGACCACCAGTCTGGCGTCCATCGTGACCCTGATCGACATCACCGGCGCGGCCCGCACCGT
CAACGCGCAGTTCTACCTGCCGTTCGAGGCGTACATCACCGCCGGCGTGTTCTACCTGTGCCTGACCTTCATTCTGGTGC
GCCTGTTCAAGCTGGCCGAGCGTCGCTGGCTGAGCTACCTGGCCCCGAGGAAGCACTGA

Upstream 100 bases:

>100_bases
TCGCAGTGGCGGCGATGTACCTGGTGATCACCAGTGTCTCGTTGCTGGCGCTGCGTCACCTTGAGAAGCGCTACTCGGTA
GGCGTAAGGGCGGCTGATCT

Downstream 100 bases:

>100_bases
TATGGAACGCATCGACCACGTTCTGCCGTGGAGCCACCTGGGCAGCGAGCGCCGGATTTCGGTGTTCAGCTTTGGAAATA
GAGAGCGCAGTGGTGGGCGC

Product: amino acid ABC transporter permease

Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MIFDYNVIWEALPLYFGGLVTTLKLLALSLFFGLLAALPLGLMRVSKNAVVNGAAWLYTYVIRGTPMLVQLFLIYYGLAQ
FEAVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSLKATPNGEIEAAKAMGMSRVKMYKRILLPSALRRALPQYSN
EVIMMLQTTSLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLFKLAERRWLSYLAPRKH

Sequences:

>Translated_232_residues
MIFDYNVIWEALPLYFGGLVTTLKLLALSLFFGLLAALPLGLMRVSKNAVVNGAAWLYTYVIRGTPMLVQLFLIYYGLAQ
FEAVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSLKATPNGEIEAAKAMGMSRVKMYKRILLPSALRRALPQYSN
EVIMMLQTTSLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLFKLAERRWLSYLAPRKH
>Mature_232_residues
MIFDYNVIWEALPLYFGGLVTTLKLLALSLFFGLLAALPLGLMRVSKNAVVNGAAWLYTYVIRGTPMLVQLFLIYYGLAQ
FEAVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSLKATPNGEIEAAKAMGMSRVKMYKRILLPSALRRALPQYSN
EVIMMLQTTSLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLFKLAERRWLSYLAPRKH

Specific function: Component of the octopine active transport system probably consisting of four subunits:Q, M, P and T [H]

COG id: COG4160

COG function: function code E; ABC-type arginine/histidine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788645, Length=215, Percent_Identity=47.906976744186, Blast_Score=194, Evalue=5e-51,
Organism=Escherichia coli, GI1787086, Length=223, Percent_Identity=36.7713004484305, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1787030, Length=224, Percent_Identity=33.4821428571429, Blast_Score=113, Evalue=9e-27,
Organism=Escherichia coli, GI1788226, Length=210, Percent_Identity=32.3809523809524, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1788646, Length=208, Percent_Identity=31.25, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786873, Length=223, Percent_Identity=30.4932735426009, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787087, Length=220, Percent_Identity=25, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87082239, Length=214, Percent_Identity=28.5046728971963, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786874, Length=216, Percent_Identity=23.1481481481481, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25970; Mature: 25970

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFDYNVIWEALPLYFGGLVTTLKLLALSLFFGLLAALPLGLMRVSKNAVVNGAAWLYTY
CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIRGTPMLVQLFLIYYGLAQFEAVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
KATPNGEIEAAKAMGMSRVKMYKRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH
TGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLFKLAERRWLSYLAPRKH
CCCCEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIFDYNVIWEALPLYFGGLVTTLKLLALSLFFGLLAALPLGLMRVSKNAVVNGAAWLYTY
CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIRGTPMLVQLFLIYYGLAQFEAVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
KATPNGEIEAAKAMGMSRVKMYKRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH
TGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLFKLAERRWLSYLAPRKH
CCCCEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]

Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655707; 1732218 [H]