| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77460485
Identifier: 77460485
GI number: 77460485
Start: 4812059
End: 4812613
Strand: Reverse
Name: 77460485
Synonym: Pfl01_4264
Alternate gene names: NA
Gene position: 4812613-4812059 (Counterclockwise)
Preceding gene: 77460486
Following gene: 77460484
Centisome position: 74.75
GC content: 59.64
Gene sequence:
>555_bases ATGGACACTTCAATGACGCACAAACACGTAAAAAATCAAAACGAAAGCTCGGCGGGGCTCACTCGCCGCAATCTGTTGCG CGGTTCCGTGACGCTGGGCCTGGCGGCGATGATCGGCAGTGCGCTGCCCTGGCAGTCGGTGCTGGCAGCCCAGGTATCGA GCGACGATTTCATTGCGCTGTCGCAGTTTCTGGTCAGCCGTGCGGTCAATCCGGTCCTGGCCGGTCGTTACTACGCTGCG CTGGACAAGCGCGCGCCGAATTTCTCGACCAACGTGATTGCCCTGAAGCAATTGATCGGCGCACAGGGGTACCGGCATGT CGATGAATACCTGGCGCAGCCGAACCCGGATCCGTCGCTGCGGGCCACGGCCACCAGCATCATTTCCGCCTGGTATCTGG GCATTGTCGGTGAGCCGGCGGATGCGGAGCTGATCAGCTATTCCCTCGCCATGATGTATCAGCCCACTCACGGCATTCTC ATCATTCCAACCTACGGTGGCGGCCCGGATTCATGGGGTCCCAAACCATCAGTCATTCAGGACTCGACAGTATGA
Upstream 100 bases:
>100_bases GATGGCGAAGTTTACGATCCCGGTCATCATTCTCGTGTGCTTGTTGATCGGCCTGGGCGCATGGGCCTTGATGGCACGTC GGCGCAAGGAGGCCTGAGCA
Downstream 100 bases:
>100_bases GCAGCGATCAATTCGATGCCGATGTGGTGATCATCGGTTCTGGTGTCATGGGCGGTCTGATCGCCACGGGCCTGGCCAAA GCAAACAAGTCGGTGATCGT
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: Dehydrogenase Subunit; Conserved Protein; Dehydrogenase Subunit III
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MDTSMTHKHVKNQNESSAGLTRRNLLRGSVTLGLAAMIGSALPWQSVLAAQVSSDDFIALSQFLVSRAVNPVLAGRYYAA LDKRAPNFSTNVIALKQLIGAQGYRHVDEYLAQPNPDPSLRATATSIISAWYLGIVGEPADAELISYSLAMMYQPTHGIL IIPTYGGGPDSWGPKPSVIQDSTV
Sequences:
>Translated_184_residues MDTSMTHKHVKNQNESSAGLTRRNLLRGSVTLGLAAMIGSALPWQSVLAAQVSSDDFIALSQFLVSRAVNPVLAGRYYAA LDKRAPNFSTNVIALKQLIGAQGYRHVDEYLAQPNPDPSLRATATSIISAWYLGIVGEPADAELISYSLAMMYQPTHGIL IIPTYGGGPDSWGPKPSVIQDSTV >Mature_184_residues MDTSMTHKHVKNQNESSAGLTRRNLLRGSVTLGLAAMIGSALPWQSVLAAQVSSDDFIALSQFLVSRAVNPVLAGRYYAA LDKRAPNFSTNVIALKQLIGAQGYRHVDEYLAQPNPDPSLRATATSIISAWYLGIVGEPADAELISYSLAMMYQPTHGIL IIPTYGGGPDSWGPKPSVIQDSTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19743; Mature: 19743
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTSMTHKHVKNQNESSAGLTRRNLLRGSVTLGLAAMIGSALPWQSVLAAQVSSDDFIAL CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHH SQFLVSRAVNPVLAGRYYAALDKRAPNFSTNVIALKQLIGAQGYRHVDEYLAQPNPDPSL HHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCH RATATSIISAWYLGIVGEPADAELISYSLAMMYQPTHGILIIPTYGGGPDSWGPKPSVIQ HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCEEEEECCCCCCCCCCCCCCCCC DSTV CCCC >Mature Secondary Structure MDTSMTHKHVKNQNESSAGLTRRNLLRGSVTLGLAAMIGSALPWQSVLAAQVSSDDFIAL CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHH SQFLVSRAVNPVLAGRYYAALDKRAPNFSTNVIALKQLIGAQGYRHVDEYLAQPNPDPSL HHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCH RATATSIISAWYLGIVGEPADAELISYSLAMMYQPTHGILIIPTYGGGPDSWGPKPSVIQ HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCEEEEECCCCCCCCCCCCCCCCC DSTV CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA