| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460483
Identifier: 77460483
GI number: 77460483
Start: 4808907
End: 4810346
Strand: Direct
Name: 77460483
Synonym: Pfl01_4262
Alternate gene names: NA
Gene position: 4808907-4810346 (Clockwise)
Preceding gene: 77460478
Following gene: 77460487
Centisome position: 74.69
GC content: 55.14
Gene sequence:
>1440_bases TTGCGCAAGGATTACCCTGCGCGGCGGTTCACACCTTCCAACGGCAAAGGATTCATCGTGTACATCAAGGGACGCTACAT CGTGTCGGTCTGTGCGCTGCTGTTTTTTCAGCAGGCAGTGGCGAGCGGAATGGACTGCACAAAGGCGGCGAGTGCTGTGG AGAAGGCGATTTGCGCGGACAAGCCTTTGTATGAGCTGGATGCGCAGATGGGGGCGGCTTATCGGAAGCTTATGAAAGCT GCCCCGGCGCAGGCCGAAGTGAAAAACGCCCAGCGCCAGTGGCTGAAGGAGCGTGATCGATGTGGCGAGGAGGTCAGTTG CCTGAACCAGCGTTATCAGGATCGTTTGCAGGTGTTGCACGCGCAGTGGATCGACGCGGTGGCCTACAAACCGGACGAGA TCGATAAACAGGTCATGGAGGATCTGCAGCAACGGATCCGGGAGATGAGCAAGGAGAACCCGGAGTTTGCGCTGGAGCGG GCGCTGGATTCTCTCTCAACCGACGACGGCGAAACTTCGTTCTCCGGTGATCCCAGCGACGACAACACTTACGATCAGAC CTTGTTTCCCAAAAGCATTCCCAAGGGTGTAACCCCGAATGAATGGAAGGCGCTTAAAGCTTCCGGTCTTGACGCTGATG CCGAGCAGGGCCAGGCGAATTACTCATTGATAGACCTGAACGGCGACGGTCAACGGGATCTGATCGTTTCAACCTACACC GGTGGTACAGGCCTCTTCAGCTTCTATGAAACCTTCCGTCGCGATGGAGAACGGTTCACCAGAAGGCTGGCTCCCTATGA TCCGGACGCCAGCGCCGGCAGCTCGTTGTTCTCCACCAATGATCGAGGCGCCAACCAATCGGCAGCCTGGATCAAATCTC ATGGAAGGATGTATCTCGCCTATCGCAACGGGTCATACGGTGTCGATCAGATCTACCTGCTCAATCCCCTGAAGATCAAC AGCCAAATACCAACAGTGACGGTTCGGTATGACTACAAGTTGATCGTGCCGAGCAATCAATACTCCGAGGAAAGCAGTAC CAGCTACGTACTGGACCCAGTCTTGCGAAAGACTCTCATAAAAGCCCTGACCCAATCGGGTGCGGGTAAACCTCAACAAC CCAGCCAACACAAAGGCCCCCTCTGCCCCATTCCTGCATCGGGCTCGGGTGACGATGATTATTACAGTTACGGCGCAGGT TACTACGCAGTAGAAACCGTCATGGACTTGCCAGTTTTCATCGACAACGAGTGCTTCATCGCAAGGCTGAACAATTGGTT TGGTAGTTACAGCGAGAAAGACGGATTGCCCGCCTTGCTGACTTTGCGCAAGCCTGGGTCTCAGGATCCCGAACGGGGCT TCTCAGTCAACGGCCGCCGACATTTCACGAACGTCACAACCTCGATTGGAAAGGCAGAGGGTGGAGCTGAAATTTTCTAG
Upstream 100 bases:
>100_bases GCCGGCCAAATGCTATCAAGCGATTTCGCGCGACTCTGTAGTCACCGAACGGGTTATCGGCCGGATCAGCGATTCTCTTG AAGCGGGGGTTCAAGATTCG
Downstream 100 bases:
>100_bases CCCTTCCTCCTGCAAGATTGAAAGACACAAAAAAGCCCCACCAGACACCTCTGCGTGGGGCTTTGTACTTCAGGGCGCTT CTCAGACCTCCGCCACCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MRKDYPARRFTPSNGKGFIVYIKGRYIVSVCALLFFQQAVASGMDCTKAASAVEKAICADKPLYELDAQMGAAYRKLMKA APAQAEVKNAQRQWLKERDRCGEEVSCLNQRYQDRLQVLHAQWIDAVAYKPDEIDKQVMEDLQQRIREMSKENPEFALER ALDSLSTDDGETSFSGDPSDDNTYDQTLFPKSIPKGVTPNEWKALKASGLDADAEQGQANYSLIDLNGDGQRDLIVSTYT GGTGLFSFYETFRRDGERFTRRLAPYDPDASAGSSLFSTNDRGANQSAAWIKSHGRMYLAYRNGSYGVDQIYLLNPLKIN SQIPTVTVRYDYKLIVPSNQYSEESSTSYVLDPVLRKTLIKALTQSGAGKPQQPSQHKGPLCPIPASGSGDDDYYSYGAG YYAVETVMDLPVFIDNECFIARLNNWFGSYSEKDGLPALLTLRKPGSQDPERGFSVNGRRHFTNVTTSIGKAEGGAEIF
Sequences:
>Translated_479_residues MRKDYPARRFTPSNGKGFIVYIKGRYIVSVCALLFFQQAVASGMDCTKAASAVEKAICADKPLYELDAQMGAAYRKLMKA APAQAEVKNAQRQWLKERDRCGEEVSCLNQRYQDRLQVLHAQWIDAVAYKPDEIDKQVMEDLQQRIREMSKENPEFALER ALDSLSTDDGETSFSGDPSDDNTYDQTLFPKSIPKGVTPNEWKALKASGLDADAEQGQANYSLIDLNGDGQRDLIVSTYT GGTGLFSFYETFRRDGERFTRRLAPYDPDASAGSSLFSTNDRGANQSAAWIKSHGRMYLAYRNGSYGVDQIYLLNPLKIN SQIPTVTVRYDYKLIVPSNQYSEESSTSYVLDPVLRKTLIKALTQSGAGKPQQPSQHKGPLCPIPASGSGDDDYYSYGAG YYAVETVMDLPVFIDNECFIARLNNWFGSYSEKDGLPALLTLRKPGSQDPERGFSVNGRRHFTNVTTSIGKAEGGAEIF >Mature_479_residues MRKDYPARRFTPSNGKGFIVYIKGRYIVSVCALLFFQQAVASGMDCTKAASAVEKAICADKPLYELDAQMGAAYRKLMKA APAQAEVKNAQRQWLKERDRCGEEVSCLNQRYQDRLQVLHAQWIDAVAYKPDEIDKQVMEDLQQRIREMSKENPEFALER ALDSLSTDDGETSFSGDPSDDNTYDQTLFPKSIPKGVTPNEWKALKASGLDADAEQGQANYSLIDLNGDGQRDLIVSTYT GGTGLFSFYETFRRDGERFTRRLAPYDPDASAGSSLFSTNDRGANQSAAWIKSHGRMYLAYRNGSYGVDQIYLLNPLKIN SQIPTVTVRYDYKLIVPSNQYSEESSTSYVLDPVLRKTLIKALTQSGAGKPQQPSQHKGPLCPIPASGSGDDDYYSYGAG YYAVETVMDLPVFIDNECFIARLNNWFGSYSEKDGLPALLTLRKPGSQDPERGFSVNGRRHFTNVTTSIGKAEGGAEIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53295; Mature: 53295
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKDYPARRFTPSNGKGFIVYIKGRYIVSVCALLFFQQAVASGMDCTKAASAVEKAICAD CCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC KPLYELDAQMGAAYRKLMKAAPAQAEVKNAQRQWLKERDRCGEEVSCLNQRYQDRLQVLH CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AQWIDAVAYKPDEIDKQVMEDLQQRIREMSKENPEFALERALDSLSTDDGETSFSGDPSD HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC DNTYDQTLFPKSIPKGVTPNEWKALKASGLDADAEQGQANYSLIDLNGDGQRDLIVSTYT CCCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCHHCCCCCEEEEEECCCCCCCEEEEEEC GGTGLFSFYETFRRDGERFTRRLAPYDPDASAGSSLFSTNDRGANQSAAWIKSHGRMYLA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEE YRNGSYGVDQIYLLNPLKINSQIPTVTVRYDYKLIVPSNQYSEESSTSYVLDPVLRKTLI EECCCCCCCEEEEECCEEECCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH KALTQSGAGKPQQPSQHKGPLCPIPASGSGDDDYYSYGAGYYAVETVMDLPVFIDNECFI HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCEEECCCCCE ARLNNWFGSYSEKDGLPALLTLRKPGSQDPERGFSVNGRRHFTNVTTSIGKAEGGAEIF EEHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRKDYPARRFTPSNGKGFIVYIKGRYIVSVCALLFFQQAVASGMDCTKAASAVEKAICAD CCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC KPLYELDAQMGAAYRKLMKAAPAQAEVKNAQRQWLKERDRCGEEVSCLNQRYQDRLQVLH CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AQWIDAVAYKPDEIDKQVMEDLQQRIREMSKENPEFALERALDSLSTDDGETSFSGDPSD HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC DNTYDQTLFPKSIPKGVTPNEWKALKASGLDADAEQGQANYSLIDLNGDGQRDLIVSTYT CCCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCHHCCCCCEEEEEECCCCCCCEEEEEEC GGTGLFSFYETFRRDGERFTRRLAPYDPDASAGSSLFSTNDRGANQSAAWIKSHGRMYLA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEE YRNGSYGVDQIYLLNPLKINSQIPTVTVRYDYKLIVPSNQYSEESSTSYVLDPVLRKTLI EECCCCCCCEEEEECCEEECCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH KALTQSGAGKPQQPSQHKGPLCPIPASGSGDDDYYSYGAGYYAVETVMDLPVFIDNECFI HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCEEECCCCCE ARLNNWFGSYSEKDGLPALLTLRKPGSQDPERGFSVNGRRHFTNVTTSIGKAEGGAEIF EEHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA