| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460459
Identifier: 77460459
GI number: 77460459
Start: 4780029
End: 4781135
Strand: Reverse
Name: 77460459
Synonym: Pfl01_4238
Alternate gene names: NA
Gene position: 4781135-4780029 (Counterclockwise)
Preceding gene: 77460460
Following gene: 77460457
Centisome position: 74.26
GC content: 51.67
Gene sequence:
>1107_bases TTGTCCATCATGGGATCGAGCCGTGATGCTTTCGGAACAGGGAGACTGGAAATGGTTGCGTTCATCACTGCTCAAGAACA GAAAAAAATTGTTCAGGCGAAGCGCCGACGCAGAATTGATCTTCCTGCATCTTCGATTGATGGAGCGGAGAACGGAGTGA TTCCCCTTACTGTGTCGAGTAAGGACATGACATTTCGAATTCCTTGTTTTTCAGGACAACAGGTCGGGGCACCTTTGGTT GCTCATGTTCGTACGAGATATTCGTCGTCGGATTGGGCGAAGGTCACAACCATCACGACGGCTGATGAGGATACGACTCT CGTCATACCCGCCAATCGTGCGATTGACCTCAGAGGCCAACCTCTGGAACTCTCCTACGACTATTTATTCATTGATCCTC CCTTTTCACCCAAGACCTTGTATCTGGCTGAGGGCTTGATTTATTGGCCTGAGTTGGATGAGGTCGAAGGCACTCTCATC TCTTCGGAATTGGCTGACAAGGGGGTGAGTCTAAGGATCCGGGCGTCAGATGCGCTCTCACCTGGTGCACTGGTTGCCCT TTTCTGTCATGGGGCTGATTGCGAGTCCAGTTGGGTCAAGTACTTTCGGATCGAGGCGAGTGATGCAGGCAAGGACGTCA TAATTCCTGTTGAACCCCGTCACCTGAAGGCGAACAAGTATGGCCATGTTGCGTTTGTATACACCGTGAACAATGGTGGG CAGCAATGGACCAGTCCCGTTTCGGAGTTTCAAGTTGAAGGTGACTTGCGGAGCCCGGTTCCTGACCATGGCTCGTTGGG AGCCTTCGAGAGTGGCCGTCTTGAGATAATCGATGAAAGTGGAAAGACTCCAATCACGCTCCGCACTCACGGAATGAGTA TCGGAGATGTACTTACCTTTGTTTTTTGGGGGAGTGCCGTCGGAACCGTGTATGTCTTGCAACAGACATTGGGAGCGCAC CAGATCGGTAAGGATCTGAAAATCAGGGCTCCATACAGGCCTGATCAGTTAGGCGGTGCCGCCAAGGCTTTCAGCATTGT CGAACGGGCGTCGGGAGGTGCCGTTGGCTCTCCATTGATGTGGCTTTCTGTATCGACAAACAGATAA
Upstream 100 bases:
>100_bases TGAAGCCGAGTCTCTTTCAGGTGGCGCCGGGGTTATGGCCATTCATCGCCACTGTCAGATCTGACAGTGGTTCATTCCGC GTATTTCCAACACTCTGTTT
Downstream 100 bases:
>100_bases TCAACGCTTGGAGCTTCGGCCCATCGGCTTGTATTGATAGTCACGCCTGCGCCCGATAAGCCCCCGGCGTCAGCCCCGTC CACTTCTTGAACGCCCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSIMGSSRDAFGTGRLEMVAFITAQEQKKIVQAKRRRRIDLPASSIDGAENGVIPLTVSSKDMTFRIPCFSGQQVGAPLV AHVRTRYSSSDWAKVTTITTADEDTTLVIPANRAIDLRGQPLELSYDYLFIDPPFSPKTLYLAEGLIYWPELDEVEGTLI SSELADKGVSLRIRASDALSPGALVALFCHGADCESSWVKYFRIEASDAGKDVIIPVEPRHLKANKYGHVAFVYTVNNGG QQWTSPVSEFQVEGDLRSPVPDHGSLGAFESGRLEIIDESGKTPITLRTHGMSIGDVLTFVFWGSAVGTVYVLQQTLGAH QIGKDLKIRAPYRPDQLGGAAKAFSIVERASGGAVGSPLMWLSVSTNR
Sequences:
>Translated_368_residues MSIMGSSRDAFGTGRLEMVAFITAQEQKKIVQAKRRRRIDLPASSIDGAENGVIPLTVSSKDMTFRIPCFSGQQVGAPLV AHVRTRYSSSDWAKVTTITTADEDTTLVIPANRAIDLRGQPLELSYDYLFIDPPFSPKTLYLAEGLIYWPELDEVEGTLI SSELADKGVSLRIRASDALSPGALVALFCHGADCESSWVKYFRIEASDAGKDVIIPVEPRHLKANKYGHVAFVYTVNNGG QQWTSPVSEFQVEGDLRSPVPDHGSLGAFESGRLEIIDESGKTPITLRTHGMSIGDVLTFVFWGSAVGTVYVLQQTLGAH QIGKDLKIRAPYRPDQLGGAAKAFSIVERASGGAVGSPLMWLSVSTNR >Mature_367_residues SIMGSSRDAFGTGRLEMVAFITAQEQKKIVQAKRRRRIDLPASSIDGAENGVIPLTVSSKDMTFRIPCFSGQQVGAPLVA HVRTRYSSSDWAKVTTITTADEDTTLVIPANRAIDLRGQPLELSYDYLFIDPPFSPKTLYLAEGLIYWPELDEVEGTLIS SELADKGVSLRIRASDALSPGALVALFCHGADCESSWVKYFRIEASDAGKDVIIPVEPRHLKANKYGHVAFVYTVNNGGQ QWTSPVSEFQVEGDLRSPVPDHGSLGAFESGRLEIIDESGKTPITLRTHGMSIGDVLTFVFWGSAVGTVYVLQQTLGAHQ IGKDLKIRAPYRPDQLGGAAKAFSIVERASGGAVGSPLMWLSVSTNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39962; Mature: 39831
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIMGSSRDAFGTGRLEMVAFITAQEQKKIVQAKRRRRIDLPASSIDGAENGVIPLTVSS CCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECC KDMTFRIPCFSGQQVGAPLVAHVRTRYSSSDWAKVTTITTADEDTTLVIPANRAIDLRGQ CCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCEEECCCC PLELSYDYLFIDPPFSPKTLYLAEGLIYWPELDEVEGTLISSELADKGVSLRIRASDALS CEEEEEEEEEECCCCCCCEEEEECCEEECCCCCCCCCEEEEHHHHCCCCEEEEEECCCCC PGALVALFCHGADCESSWVKYFRIEASDAGKDVIIPVEPRHLKANKYGHVAFVYTVNNGG CCEEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCCEEECCCCCCEEEEEEECCCC QQWTSPVSEFQVEGDLRSPVPDHGSLGAFESGRLEIIDESGKTPITLRTHGMSIGDVLTF CCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHH VFWGSAVGTVYVLQQTLGAHQIGKDLKIRAPYRPDQLGGAAKAFSIVERASGGAVGSPLM HHHHHHHHHHHHHHHHHCHHHCCCCCEEECCCCCHHCCCHHHHHHHHHHCCCCCCCCCEE WLSVSTNR EEEEECCC >Mature Secondary Structure SIMGSSRDAFGTGRLEMVAFITAQEQKKIVQAKRRRRIDLPASSIDGAENGVIPLTVSS CCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECC KDMTFRIPCFSGQQVGAPLVAHVRTRYSSSDWAKVTTITTADEDTTLVIPANRAIDLRGQ CCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCEEECCCC PLELSYDYLFIDPPFSPKTLYLAEGLIYWPELDEVEGTLISSELADKGVSLRIRASDALS CEEEEEEEEEECCCCCCCEEEEECCEEECCCCCCCCCEEEEHHHHCCCCEEEEEECCCCC PGALVALFCHGADCESSWVKYFRIEASDAGKDVIIPVEPRHLKANKYGHVAFVYTVNNGG CCEEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCCEEECCCCCCEEEEEEECCCC QQWTSPVSEFQVEGDLRSPVPDHGSLGAFESGRLEIIDESGKTPITLRTHGMSIGDVLTF CCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHH VFWGSAVGTVYVLQQTLGAHQIGKDLKIRAPYRPDQLGGAAKAFSIVERASGGAVGSPLM HHHHHHHHHHHHHHHHHCHHHCCCCCEEECCCCCHHCCCHHHHHHHHHHCCCCCCCCCEE WLSVSTNR EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA