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The map label for this gene is oruR [H]

Identifier: 77460458

GI number: 77460458

Start: 4778993

End: 4779988

Strand: Direct

Name: oruR [H]

Synonym: Pfl01_4237

Alternate gene names: 77460458

Gene position: 4778993-4779988 (Clockwise)

Preceding gene: 77460455

Following gene: 77460463

Centisome position: 74.23

GC content: 62.05

Gene sequence:

>996_bases
ATGCGCGAACGCACCATCGCCAGTCACTTTGCCCGCGCCGCCCTCGGTGGCGCGCGGCGCTCGGGTTACGACTATTCGGA
CCTGCTGCAGCAACTGGGTATCAGCCCCGAACTGCTCGACGAGCCGCGCGCGCGGATCGCCCCGGAACAATTCACCCAAC
TGATCCAGAACTTGTGGCTGGCCCTGGACGACGAATACCTGGGTTTTGGCAACGCACCGAGCAAACCCGGCAGCTTCGCC
ATGATGTGCCACGCGATCATTCATTGCCGCAGCCTGGAAAAGGCTCTGCAACGCGGCTTATTGTTTTATAGCCTATTCCC
CGAAGCTCCGCGTCTGACCCTGACCCATGAAGACGAATGGGTGCGCCTGAGTCTCGACGATGCGCAATTGTGGGACCCGG
ATCACTTTCTCAGCGAGAGCCTGCTGGTGATCTGGCATCGCCTCGGCAGCTGGCTGATCGGCCAGCGGATTCGTCTGGAA
CAGGCGAGCTTCAGCTACCCGAAACCGGCGCACGGGGCGGAATACGACCTGCTGTTTTCCTGCCCGCTGGAATTTTCGGC
AGCGCAAAGCAGCCTGGTGTTTCACAGTCGCTATCTGCACATGCCGCTGTTGCAGGACGAACGCACCCTCAAGCATTTCC
TCGAACGCTCCCCCGCCGATTTGCTGTCACGCCCGGACGACGGCAACAGCCTGAGCAGCCGGCTGCGTCGCTTGCTCAGC
CATGACAGCGCACGCTGGCCCGACCTCGAAGCCGTGGCCGCGCACCTGCACATCAGCCCGCAAACCCTGCGCCGGCATTT
GCGCGAGGAAGGCACCAGTTTTCAGGAATTGAAGGATCAGTTGCGTCGGGACATCGCGATTTATCACCTGGGGCGCGCGG
ATCTGTCGTTGCAACAGATCGCCGAACAACTCGGTTTCTCCGAGCCGTCGGCGTTTCATCGGGCGTTCAAGAAGTGGACG
GGGCTGACGCCGGGGGCTTATCGGGCGCAGGCGTGA

Upstream 100 bases:

>100_bases
CAACTCGCCCGACCTCGTCCTACAATTTGGCGGAAATCCGCCTTGTTACCGATCAAAGGCAGCCGCTACCATCGGTCGCC
CGAGGAAGGATCTGCCGCCC

Downstream 100 bases:

>100_bases
CTATCAATACAAGCCGATGGGCCGAAGCTCCAAGCGTTGATTATCTGTTTGTCGATACAGAAAGCCACATCAATGGAGAG
CCAACGGCACCTCCCGACGC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MRERTIASHFARAALGGARRSGYDYSDLLQQLGISPELLDEPRARIAPEQFTQLIQNLWLALDDEYLGFGNAPSKPGSFA
MMCHAIIHCRSLEKALQRGLLFYSLFPEAPRLTLTHEDEWVRLSLDDAQLWDPDHFLSESLLVIWHRLGSWLIGQRIRLE
QASFSYPKPAHGAEYDLLFSCPLEFSAAQSSLVFHSRYLHMPLLQDERTLKHFLERSPADLLSRPDDGNSLSSRLRRLLS
HDSARWPDLEAVAAHLHISPQTLRRHLREEGTSFQELKDQLRRDIAIYHLGRADLSLQQIAEQLGFSEPSAFHRAFKKWT
GLTPGAYRAQA

Sequences:

>Translated_331_residues
MRERTIASHFARAALGGARRSGYDYSDLLQQLGISPELLDEPRARIAPEQFTQLIQNLWLALDDEYLGFGNAPSKPGSFA
MMCHAIIHCRSLEKALQRGLLFYSLFPEAPRLTLTHEDEWVRLSLDDAQLWDPDHFLSESLLVIWHRLGSWLIGQRIRLE
QASFSYPKPAHGAEYDLLFSCPLEFSAAQSSLVFHSRYLHMPLLQDERTLKHFLERSPADLLSRPDDGNSLSSRLRRLLS
HDSARWPDLEAVAAHLHISPQTLRRHLREEGTSFQELKDQLRRDIAIYHLGRADLSLQQIAEQLGFSEPSAFHRAFKKWT
GLTPGAYRAQA
>Mature_331_residues
MRERTIASHFARAALGGARRSGYDYSDLLQQLGISPELLDEPRARIAPEQFTQLIQNLWLALDDEYLGFGNAPSKPGSFA
MMCHAIIHCRSLEKALQRGLLFYSLFPEAPRLTLTHEDEWVRLSLDDAQLWDPDHFLSESLLVIWHRLGSWLIGQRIRLE
QASFSYPKPAHGAEYDLLFSCPLEFSAAQSSLVFHSRYLHMPLLQDERTLKHFLERSPADLLSRPDDGNSLSSRLRRLLS
HDSARWPDLEAVAAHLHISPQTLRRHLREEGTSFQELKDQLRRDIAIYHLGRADLSLQQIAEQLGFSEPSAFHRAFKKWT
GLTPGAYRAQA

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37885; Mature: 37885

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERTIASHFARAALGGARRSGYDYSDLLQQLGISPELLDEPRARIAPEQFTQLIQNLWL
CCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHCCCHHHHCCCHHCCCHHHHHHHHHHHHH
ALDDEYLGFGNAPSKPGSFAMMCHAIIHCRSLEKALQRGLLFYSLFPEAPRLTLTHEDEW
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEECCCCE
VRLSLDDAQLWDPDHFLSESLLVIWHRLGSWLIGQRIRLEQASFSYPKPAHGAEYDLLFS
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCEEEEEE
CPLEFSAAQSSLVFHSRYLHMPLLQDERTLKHFLERSPADLLSRPDDGNSLSSRLRRLLS
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHH
HDSARWPDLEAVAAHLHISPQTLRRHLREEGTSFQELKDQLRRDIAIYHLGRADLSLQQI
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
AEQLGFSEPSAFHRAFKKWTGLTPGAYRAQA
HHHHCCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRERTIASHFARAALGGARRSGYDYSDLLQQLGISPELLDEPRARIAPEQFTQLIQNLWL
CCCHHHHHHHHHHHHCCHHCCCCCHHHHHHHHCCCHHHHCCCHHCCCHHHHHHHHHHHHH
ALDDEYLGFGNAPSKPGSFAMMCHAIIHCRSLEKALQRGLLFYSLFPEAPRLTLTHEDEW
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEECCCCE
VRLSLDDAQLWDPDHFLSESLLVIWHRLGSWLIGQRIRLEQASFSYPKPAHGAEYDLLFS
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCEEEEEE
CPLEFSAAQSSLVFHSRYLHMPLLQDERTLKHFLERSPADLLSRPDDGNSLSSRLRRLLS
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHH
HDSARWPDLEAVAAHLHISPQTLRRHLREEGTSFQELKDQLRRDIAIYHLGRADLSLQQI
CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
AEQLGFSEPSAFHRAFKKWTGLTPGAYRAQA
HHHHCCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]