| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460423
Identifier: 77460423
GI number: 77460423
Start: 4743459
End: 4744313
Strand: Reverse
Name: 77460423
Synonym: Pfl01_4202
Alternate gene names: NA
Gene position: 4744313-4743459 (Counterclockwise)
Preceding gene: 77460424
Following gene: 77460422
Centisome position: 73.69
GC content: 65.38
Gene sequence:
>855_bases ATGAACCCCGCCGTCGAAGAAGTGCGCCTGAGCCTGCCGCATATCGAACTGGCGGCGCACCTGTTCGGCCCGGAAGACGG GTTGCCGGTGATCGCCCTGCACGGCTGGCTGGATAACGCCAACAGCTTCGCGCGCTTGGCGCCGAAGCTCAAAGGCTTGC GCATCGTCGCGCTGGACATGGCCGGTCACGGGCATTCCGGGCACCGGCCGAACGGCGCCGGTTACGCGCTGTGGGATTAC GCCCATGACGTGCTGCAGGTCGCCGAGCAACTCGGCTGGAAACGTTTCGGCCTGCTCGGGCATTCCATGGGCGCAATCGT GTCGCTGGTGCTGGCCGGGTCGTTGCCCGAACGCATCACCCATCTGGCGTTGATCGACGGGGTAATTCCTCCTACCGACA AAGGCGAGAACGCCGCCGAGCGCATGGGCATGGCCTTACAGGCGCAGCTCGATCTTCGGGAAAAGCGCAAACCGGTCTAC AACACTCTCGACCGGGCCATCGAGGCGCGGATGAAAGGGCTGGTGGCGGTCAGTCGCGAAGCCGCCGAACTGCTGGCGCA ACGCGGACTGATGCCGGTGCCCGGCGGTTACACCTGGCGCACCGACAACCGCCTGACCCTGCCGTCGCCGCTGCGCCTGA CCCAGGAGCAGGCGATGGCTTTCGTCCAACGCATTGCCTGCCCCGCGCAATTGGTGGTCGCCGCCGACGGCATGCTGGCC AAACATCCGGAGCTGCTGGAACGTCTACCCTTTGACCGGGAACAGCTGCCGGGCGGGCACCATCTGCACCTGAACGATGA GGCCGGGGCCGACCTTGTCGCAGACTGTTTCAATCGGTTCTTCGCCATTCCTTGA
Upstream 100 bases:
>100_bases CTGGCGGCCATATGTTTCCGCTTGAGCGCCCGCAGGACACCGCTCAATTACTGAAAAACCTGTTCGATCGCTGGGAGCGC CGGCAAGACAAGGATTGCGC
Downstream 100 bases:
>100_bases CTTGCTCCCGGCAACTGTCGAGGCTGGGCAGGTTGAAATGGGAGACAACCAAGATGGATTTCTACACCGCTGCGACTTCA AACTGCCCTCGAGGCACCCA
Product: epoxide hydrolase
Products: NA
Alternate protein names: Atropine acylhydrolase; Atropinesterase [H]
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MNPAVEEVRLSLPHIELAAHLFGPEDGLPVIALHGWLDNANSFARLAPKLKGLRIVALDMAGHGHSGHRPNGAGYALWDY AHDVLQVAEQLGWKRFGLLGHSMGAIVSLVLAGSLPERITHLALIDGVIPPTDKGENAAERMGMALQAQLDLREKRKPVY NTLDRAIEARMKGLVAVSREAAELLAQRGLMPVPGGYTWRTDNRLTLPSPLRLTQEQAMAFVQRIACPAQLVVAADGMLA KHPELLERLPFDREQLPGGHHLHLNDEAGADLVADCFNRFFAIP
Sequences:
>Translated_284_residues MNPAVEEVRLSLPHIELAAHLFGPEDGLPVIALHGWLDNANSFARLAPKLKGLRIVALDMAGHGHSGHRPNGAGYALWDY AHDVLQVAEQLGWKRFGLLGHSMGAIVSLVLAGSLPERITHLALIDGVIPPTDKGENAAERMGMALQAQLDLREKRKPVY NTLDRAIEARMKGLVAVSREAAELLAQRGLMPVPGGYTWRTDNRLTLPSPLRLTQEQAMAFVQRIACPAQLVVAADGMLA KHPELLERLPFDREQLPGGHHLHLNDEAGADLVADCFNRFFAIP >Mature_284_residues MNPAVEEVRLSLPHIELAAHLFGPEDGLPVIALHGWLDNANSFARLAPKLKGLRIVALDMAGHGHSGHRPNGAGYALWDY AHDVLQVAEQLGWKRFGLLGHSMGAIVSLVLAGSLPERITHLALIDGVIPPTDKGENAAERMGMALQAQLDLREKRKPVY NTLDRAIEARMKGLVAVSREAAELLAQRGLMPVPGGYTWRTDNRLTLPSPLRLTQEQAMAFVQRIACPAQLVVAADGMLA KHPELLERLPFDREQLPGGHHLHLNDEAGADLVADCFNRFFAIP
Specific function: Alkaloid degradation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
Organism=Homo sapiens, GI18777795, Length=228, Percent_Identity=32.4561403508772, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI17137390, Length=293, Percent_Identity=32.0819112627986, Blast_Score=127, Evalue=7e-30, Organism=Drosophila melanogaster, GI24667999, Length=298, Percent_Identity=27.8523489932886, Blast_Score=124, Evalue=8e-29, Organism=Drosophila melanogaster, GI21357291, Length=292, Percent_Identity=28.7671232876712, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI24667992, Length=292, Percent_Identity=28.7671232876712, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI24655874, Length=280, Percent_Identity=27.8571428571429, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI21356953, Length=282, Percent_Identity=26.241134751773, Blast_Score=100, Evalue=8e-22, Organism=Drosophila melanogaster, GI24655886, Length=126, Percent_Identity=33.3333333333333, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI21356937, Length=291, Percent_Identity=25.7731958762887, Blast_Score=88, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.10 [H]
Molecular weight: Translated: 31017; Mature: 31017
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPAVEEVRLSLPHIELAAHLFGPEDGLPVIALHGWLDNANSFARLAPKLKGLRIVALDM CCCCHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEE AGHGHSGHRPNGAGYALWDYAHDVLQVAEQLGWKRFGLLGHSMGAIVSLVLAGSLPERIT CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHH HLALIDGVIPPTDKGENAAERMGMALQAQLDLREKRKPVYNTLDRAIEARMKGLVAVSRE HHHHHHCCCCCCCCCCCHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AAELLAQRGLMPVPGGYTWRTDNRLTLPSPLRLTQEQAMAFVQRIACPAQLVVAADGMLA HHHHHHHCCCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHH KHPELLERLPFDREQLPGGHHLHLNDEAGADLVADCFNRFFAIP CCHHHHHHCCCCHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MNPAVEEVRLSLPHIELAAHLFGPEDGLPVIALHGWLDNANSFARLAPKLKGLRIVALDM CCCCHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEE AGHGHSGHRPNGAGYALWDYAHDVLQVAEQLGWKRFGLLGHSMGAIVSLVLAGSLPERIT CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHH HLALIDGVIPPTDKGENAAERMGMALQAQLDLREKRKPVYNTLDRAIEARMKGLVAVSRE HHHHHHCCCCCCCCCCCHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AAELLAQRGLMPVPGGYTWRTDNRLTLPSPLRLTQEQAMAFVQRIACPAQLVVAADGMLA HHHHHHHCCCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCHH KHPELLERLPFDREQLPGGHHLHLNDEAGADLVADCFNRFFAIP CCHHHHHHCCCCHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA