| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460424
Identifier: 77460424
GI number: 77460424
Start: 4744310
End: 4745116
Strand: Reverse
Name: 77460424
Synonym: Pfl01_4203
Alternate gene names: NA
Gene position: 4745116-4744310 (Counterclockwise)
Preceding gene: 77460425
Following gene: 77460423
Centisome position: 73.7
GC content: 61.46
Gene sequence:
>807_bases ATGTCGCAACCGATCTTCTTCGCCCACGCCAACGGTTTCCCTTCGGGCACCTACGGCAAACTGTTCGCGGCGCTGGCGCC CGAGTACCGGGTCGCGCATCTGGAACAACACGCCCATGACCCGCGTTTCCCGGCGGGTGACAACTGGTACCACCTGGTCG ATGAACTCGTCCATCATCTGCAACAGCAAGATGAACCGGTGTGGGGTGTTGGCCATTCCTTCGGCGGCATGCTGCATTTG CACGCCGCATTGCGTTGCCCTGAACTGTATCGGGGCGTGGTGATGCTCGACTCGCCGGTGCTGACCCGCACCGATCAATG GGTGATCCGTGCCGCCAAGCGCTTTGGTTTCATCGACAAACTGACCCCGGCCGGCCGCACGCTGGGGCGCCGCGAAGAGT TTGCCGATCTGGACAGTGCCCGTGGTTATTTTGCCGGCAAGACGTTGTTTCGCAGCTTTGATCCGGAATGTTTCGATGCC TACCTGCAGCACGGTCTGCACAAGGTCGGCGACAAACTGCGCCTGCGCTTCGATCCTGCAACCGAGATCAGCATCTATCG CGGCGTGCCGCACACCAGTCCTGCTCACACCCGGCAATTGAAAGTGCCGCTGGCGGTGGTGCGCGGGCACAAGAGTCGCG TGGTGATGAACCACCACACCCGCTTCGTCGGCCGTCTGCCTCAAGGCGAGTCGCTGACCGTGCCTGGCGGCCATATGTTT CCGCTTGAGCGCCCGCAGGACACCGCTCAATTACTGAAAAACCTGTTCGATCGCTGGGAGCGCCGGCAAGACAAGGATTG CGCATGA
Upstream 100 bases:
>100_bases CCTGACCGGACTGTCATCATTCCTGGCAGTTACGGTCATTGCTGCGGGGCGCGGTCTTACGGACAATCAACGCTTGTTTT CCGCTCATGGATTTGCCGGT
Downstream 100 bases:
>100_bases ACCCCGCCGTCGAAGAAGTGCGCCTGAGCCTGCCGCATATCGAACTGGCGGCGCACCTGTTCGGCCCGGAAGACGGGTTG CCGGTGATCGCCCTGCACGG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolases Or Acyltransferases; Hydrolase/Acyltransferase; Alpha/Beta Superfamily Hydrolase/Acyltransferase; Hydrolase Protein; Alpha/Beta Hydrolase; Alpha/Beta Fold Superfamily Hydrolase; Hydrolase Alpha/Beta Family; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Fold Hydrolase; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein; Conserved Hydrolases Or Acyltransferase
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSQPIFFAHANGFPSGTYGKLFAALAPEYRVAHLEQHAHDPRFPAGDNWYHLVDELVHHLQQQDEPVWGVGHSFGGMLHL HAALRCPELYRGVVMLDSPVLTRTDQWVIRAAKRFGFIDKLTPAGRTLGRREEFADLDSARGYFAGKTLFRSFDPECFDA YLQHGLHKVGDKLRLRFDPATEISIYRGVPHTSPAHTRQLKVPLAVVRGHKSRVVMNHHTRFVGRLPQGESLTVPGGHMF PLERPQDTAQLLKNLFDRWERRQDKDCA
Sequences:
>Translated_268_residues MSQPIFFAHANGFPSGTYGKLFAALAPEYRVAHLEQHAHDPRFPAGDNWYHLVDELVHHLQQQDEPVWGVGHSFGGMLHL HAALRCPELYRGVVMLDSPVLTRTDQWVIRAAKRFGFIDKLTPAGRTLGRREEFADLDSARGYFAGKTLFRSFDPECFDA YLQHGLHKVGDKLRLRFDPATEISIYRGVPHTSPAHTRQLKVPLAVVRGHKSRVVMNHHTRFVGRLPQGESLTVPGGHMF PLERPQDTAQLLKNLFDRWERRQDKDCA >Mature_267_residues SQPIFFAHANGFPSGTYGKLFAALAPEYRVAHLEQHAHDPRFPAGDNWYHLVDELVHHLQQQDEPVWGVGHSFGGMLHLH AALRCPELYRGVVMLDSPVLTRTDQWVIRAAKRFGFIDKLTPAGRTLGRREEFADLDSARGYFAGKTLFRSFDPECFDAY LQHGLHKVGDKLRLRFDPATEISIYRGVPHTSPAHTRQLKVPLAVVRGHKSRVVMNHHTRFVGRLPQGESLTVPGGHMFP LERPQDTAQLLKNLFDRWERRQDKDCA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30541; Mature: 30410
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPIFFAHANGFPSGTYGKLFAALAPEYRVAHLEQHAHDPRFPAGDNWYHLVDELVHHL CCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH QQQDEPVWGVGHSFGGMLHLHAALRCPELYRGVVMLDSPVLTRTDQWVIRAAKRFGFIDK HHCCCCCEECCHHHCHHHHHHHHHCCHHHHCCEEEECCCCCCCCHHHHHHHHHHHCCHHH LTPAGRTLGRREEFADLDSARGYFAGKTLFRSFDPECFDAYLQHGLHKVGDKLRLRFDPA CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHEEEEECCC TEISIYRGVPHTSPAHTRQLKVPLAVVRGHKSRVVMNHHTRFVGRLPQGESLTVPGGHMF CCEEEECCCCCCCCCCCCEEECHHHHHCCCCCEEEECHHHHHHHCCCCCCEEECCCCCCC PLERPQDTAQLLKNLFDRWERRQDKDCA CCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SQPIFFAHANGFPSGTYGKLFAALAPEYRVAHLEQHAHDPRFPAGDNWYHLVDELVHHL CCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH QQQDEPVWGVGHSFGGMLHLHAALRCPELYRGVVMLDSPVLTRTDQWVIRAAKRFGFIDK HHCCCCCEECCHHHCHHHHHHHHHCCHHHHCCEEEECCCCCCCCHHHHHHHHHHHCCHHH LTPAGRTLGRREEFADLDSARGYFAGKTLFRSFDPECFDAYLQHGLHKVGDKLRLRFDPA CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHEEEEECCC TEISIYRGVPHTSPAHTRQLKVPLAVVRGHKSRVVMNHHTRFVGRLPQGESLTVPGGHMF CCEEEECCCCCCCCCCCCEEECHHHHHCCCCCEEEECHHHHHHHCCCCCCEEECCCCCCC PLERPQDTAQLLKNLFDRWERRQDKDCA CCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA