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The map label for this gene is yadH [H]

Identifier: 77460401

GI number: 77460401

Start: 4717273

End: 4718052

Strand: Reverse

Name: yadH [H]

Synonym: Pfl01_4180

Alternate gene names: 77460401

Gene position: 4718052-4717273 (Counterclockwise)

Preceding gene: 77460402

Following gene: 77460399

Centisome position: 73.28

GC content: 58.97

Gene sequence:

>780_bases
ATGAGTTCCGAGCTGCGCCCCAACCTCGTTGCCCTCAACACCATCGTTTACCGCGAAGTCAGACGCTTCACCCGGATCTG
GCCGCAGACCCTGCTGCCGCCGGCGATCACCATGGTTTTGTACTTCGTGATCTTCGGTAACCTGATCGGCCGGCAGATCG
GCGACATGGGTGGCTTCACCTACATGGAGTACATCGTGCCGGGTCTGATCATGATGTCGGTGATCACCAACTCCTACGGC
AACGTGGTGTCGAGCTTCTTCGGCAGCAAGTTCCAGCGCTCCATCGAAGAACTGATGGTGTCGCCGGTGTCGCCGCACAC
GATCCTGATCGGTTACACGATCGGTGGCGTCTTGCGAGGCCTGATGGTGGGTGTGATCGTGACGATTCTGTCGTTGTTCT
TCACCCATTTGCAGGTACACCACCTCGGTGTCACGGTGCTGGTGGTGGTGCTGACGGCAACGATCTTCTCATTGCTGGGT
TTCATCAACGCGGTGTTTGCGCGCAACTTCGATGACATCTCGATCATCCCGACCTTCGTGCTGACCCCGCTGACCTACCT
CGGTGGCGTGTTCTATTCGATCACCTTGCTGCCGCCGTTCTGGCAGACCGTGTCGCTGGCCAACCCGGTGCTGCATATGG
TCAACGCCTTCCGTTACGGCATCCTCGGTGTGTCGGACATTCGCATCGGTATCGCGATCACCTTCATGCTGGTGGCGACC
GTGGTGCTGTATTTCGGTTGTGCGCGGCTGCTGGTGAGCGGGCGCGGAATGCGCACCTGA

Upstream 100 bases:

>100_bases
CCCTGCAGAATATCGAAGTGCTGAGCCTGCGCAATAAAACCAATCGCCTCGAGGAGCTGTTCGTGTCCCTGGTGGAGAAA
AATCTGTCGAAGGTGGCGGT

Downstream 100 bases:

>100_bases
TCCCTTCGATGTTGCAATGAAAAACGGCCTCCCACAGTGGAGGCCGTTTTGCGTTCAGGACTGACGACTTTTCTTGCGCC
GCGCCCATTGCCGGGCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSSELRPNLVALNTIVYREVRRFTRIWPQTLLPPAITMVLYFVIFGNLIGRQIGDMGGFTYMEYIVPGLIMMSVITNSYG
NVVSSFFGSKFQRSIEELMVSPVSPHTILIGYTIGGVLRGLMVGVIVTILSLFFTHLQVHHLGVTVLVVVLTATIFSLLG
FINAVFARNFDDISIIPTFVLTPLTYLGGVFYSITLLPPFWQTVSLANPVLHMVNAFRYGILGVSDIRIGIAITFMLVAT
VVLYFGCARLLVSGRGMRT

Sequences:

>Translated_259_residues
MSSELRPNLVALNTIVYREVRRFTRIWPQTLLPPAITMVLYFVIFGNLIGRQIGDMGGFTYMEYIVPGLIMMSVITNSYG
NVVSSFFGSKFQRSIEELMVSPVSPHTILIGYTIGGVLRGLMVGVIVTILSLFFTHLQVHHLGVTVLVVVLTATIFSLLG
FINAVFARNFDDISIIPTFVLTPLTYLGGVFYSITLLPPFWQTVSLANPVLHMVNAFRYGILGVSDIRIGIAITFMLVAT
VVLYFGCARLLVSGRGMRT
>Mature_258_residues
SSELRPNLVALNTIVYREVRRFTRIWPQTLLPPAITMVLYFVIFGNLIGRQIGDMGGFTYMEYIVPGLIMMSVITNSYGN
VVSSFFGSKFQRSIEELMVSPVSPHTILIGYTIGGVLRGLMVGVIVTILSLFFTHLQVHHLGVTVLVVVLTATIFSLLGF
INAVFARNFDDISIIPTFVLTPLTYLGGVFYSITLLPPFWQTVSLANPVLHMVNAFRYGILGVSDIRIGIAITFMLVATV
VLYFGCARLLVSGRGMRT

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=250, Percent_Identity=60.8, Blast_Score=312, Evalue=2e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28667; Mature: 28536

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SSELRPNLVALNTIVYREVRRFTRIWPQTLLPPAITMVLYFVIFGNLIGRQIGDMGGFT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YMEYIVPGLIMMSVITNSYGNVVSSFFGSKFQRSIEELMVSPVSPHTILIGYTIGGVLRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH
LMVGVIVTILSLFFTHLQVHHLGVTVLVVVLTATIFSLLGFINAVFARNFDDISIIPTFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LTPLTYLGGVFYSITLLPPFWQTVSLANPVLHMVNAFRYGILGVSDIRIGIAITFMLVAT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
VVLYFGCARLLVSGRGMRT
HHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]