| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yceG [C]
Identifier: 77460374
GI number: 77460374
Start: 4690390
End: 4691571
Strand: Reverse
Name: yceG [C]
Synonym: Pfl01_4153
Alternate gene names: 77460374
Gene position: 4691571-4690390 (Counterclockwise)
Preceding gene: 77460375
Following gene: 77460373
Centisome position: 72.87
GC content: 61.68
Gene sequence:
>1182_bases GTGAGACGTAAACTTTTGCTGCTGCTGGAAACCGGACTGGTTCTGGCAGGGCTGCTGTTGGGCGCCAGCGCCTGGAAGAT TCATTCGGCACTGGAACAGCCCCTGAACATCACGCAGGAAGAACTGCTGGATGTGCCCAAGGGATCCACCCCGACCCGTA CTTTTCTTGGACTTGAAGCCGATGGCGTCATCAAGGACGCGTTCTGGCTGCGGGTCTACTGGCGTTTCAATCTGGCCGGC ACGCCGATTCACAGTGGTGAATACCGCATGCAGCCGGGCATGACCGTCAACGGCCTGATCGACCTGTGGAAGCGCGGCGA TGTGGTTCAGTACAGCCTGACCCTGGTCGAAGGCTGGAATTTCCATCAAGTGCGCGCCGCGCTGGCCAAAGATGAAAAGA TCGAGCAGACCCTCAACGGTCTGAGCGACAGTGATGTGATGGCCAAAATCGGTCACAAGGGCCTGTTCCCTGAAGGGCGC TTCTTCCCCGACACCTACCGCTTCGTGCGCGGTGTGACCGATACCGAACTGCTGAAAAAAGCCTTTGATCGCCTTGACGA AGTGCTGGCCAAGGAGTGGGAGAAACGCTCCGCCGACGTGCCTTACACCGAGCCTTATCAGGCGCTGATCATGGCGTCGC TGGTGGAGAAAGAAACCGGCGTGCCTCAAGAACGTGGCCAGATTGCCGGCGTCTTCGTGCGCCGAATGGCGTTGGGCATG CAGTTGCAGACCGATCCGACGGTGATCTACGGCCTGGGTGACCGCTACAACGGCAAACTGACCCGCGCCCATCTCAAGGA AGCCACGCCGTACAACACGTACATGATTCCCGGCCTGCCGCCGACGCCGATCGCCATGGTCGGACGTGAAGCCATTCACG CGGCTCTCAACCCGGTGGATGGCACCAGCCTCTACTTCGTGGCCCGTGGCGATGGCAGCCACGTGTTCTCCGATGATCTG GACGCGCACAACAACGCGGTGCGCGAATACCAGCTCAAGCGGCGCGCGGATTACCGCTCGAGCCCGGCGCCTGCAACAGC GCCCGAGGCCGCTCCGGAAGCCGAGGAGGCGATACCTGCCGCCTCACCCGATACTGCACCGGAATCGTTGCCGCAGCCGC CCGCTCAAGCGCCTGCGCCGACGCCGGAACCGGAAGCCTCCGCTCCCCAAAACACGCAATGA
Upstream 100 bases:
>100_bases CGTCTGGCCGGTACGCGCCTGTGCTGCTCTGAGCTGGCCGGTTGGCCCGCTCACCCGTAAACTGCAAACCATTGCCCGCG CGCTACTGGATGCCTGATTC
Downstream 100 bases:
>100_bases CTTTGATTAAGGACTGCCTGTGACTGGCTTGTTTATTACCCTGGAAGGCCCGGAAGGCGCCGGCAAAAGCACCAACCGCG AATACCTCGCCGAGCGCCTG
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MRRKLLLLLETGLVLAGLLLGASAWKIHSALEQPLNITQEELLDVPKGSTPTRTFLGLEADGVIKDAFWLRVYWRFNLAG TPIHSGEYRMQPGMTVNGLIDLWKRGDVVQYSLTLVEGWNFHQVRAALAKDEKIEQTLNGLSDSDVMAKIGHKGLFPEGR FFPDTYRFVRGVTDTELLKKAFDRLDEVLAKEWEKRSADVPYTEPYQALIMASLVEKETGVPQERGQIAGVFVRRMALGM QLQTDPTVIYGLGDRYNGKLTRAHLKEATPYNTYMIPGLPPTPIAMVGREAIHAALNPVDGTSLYFVARGDGSHVFSDDL DAHNNAVREYQLKRRADYRSSPAPATAPEAAPEAEEAIPAASPDTAPESLPQPPAQAPAPTPEPEASAPQNTQ
Sequences:
>Translated_393_residues MRRKLLLLLETGLVLAGLLLGASAWKIHSALEQPLNITQEELLDVPKGSTPTRTFLGLEADGVIKDAFWLRVYWRFNLAG TPIHSGEYRMQPGMTVNGLIDLWKRGDVVQYSLTLVEGWNFHQVRAALAKDEKIEQTLNGLSDSDVMAKIGHKGLFPEGR FFPDTYRFVRGVTDTELLKKAFDRLDEVLAKEWEKRSADVPYTEPYQALIMASLVEKETGVPQERGQIAGVFVRRMALGM QLQTDPTVIYGLGDRYNGKLTRAHLKEATPYNTYMIPGLPPTPIAMVGREAIHAALNPVDGTSLYFVARGDGSHVFSDDL DAHNNAVREYQLKRRADYRSSPAPATAPEAAPEAEEAIPAASPDTAPESLPQPPAQAPAPTPEPEASAPQNTQ >Mature_393_residues MRRKLLLLLETGLVLAGLLLGASAWKIHSALEQPLNITQEELLDVPKGSTPTRTFLGLEADGVIKDAFWLRVYWRFNLAG TPIHSGEYRMQPGMTVNGLIDLWKRGDVVQYSLTLVEGWNFHQVRAALAKDEKIEQTLNGLSDSDVMAKIGHKGLFPEGR FFPDTYRFVRGVTDTELLKKAFDRLDEVLAKEWEKRSADVPYTEPYQALIMASLVEKETGVPQERGQIAGVFVRRMALGM QLQTDPTVIYGLGDRYNGKLTRAHLKEATPYNTYMIPGLPPTPIAMVGREAIHAALNPVDGTSLYFVARGDGSHVFSDDL DAHNNAVREYQLKRRADYRSSPAPATAPEAAPEAEEAIPAASPDTAPESLPQPPAQAPAPTPEPEASAPQNTQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=317, Percent_Identity=37.8548895899054, Blast_Score=209, Evalue=2e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 43337; Mature: 43337
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRKLLLLLETGLVLAGLLLGASAWKIHSALEQPLNITQEELLDVPKGSTPTRTFLGLEA CCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEECCC DGVIKDAFWLRVYWRFNLAGTPIHSGEYRMQPGMTVNGLIDLWKRGDVVQYSLTLVEGWN CCCHHHEEEEEEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEEEEEEEECCC FHQVRAALAKDEKIEQTLNGLSDSDVMAKIGHKGLFPEGRFFPDTYRFVRGVTDTELLKK HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH AFDRLDEVLAKEWEKRSADVPYTEPYQALIMASLVEKETGVPQERGQIAGVFVRRMALGM HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC QLQTDPTVIYGLGDRYNGKLTRAHLKEATPYNTYMIPGLPPTPIAMVGREAIHAALNPVD EECCCCEEEEECCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCC GTSLYFVARGDGSHVFSDDLDAHNNAVREYQLKRRADYRSSPAPATAPEAAPEAEEAIPA CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCC ASPDTAPESLPQPPAQAPAPTPEPEASAPQNTQ CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRKLLLLLETGLVLAGLLLGASAWKIHSALEQPLNITQEELLDVPKGSTPTRTFLGLEA CCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEECCC DGVIKDAFWLRVYWRFNLAGTPIHSGEYRMQPGMTVNGLIDLWKRGDVVQYSLTLVEGWN CCCHHHEEEEEEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEEEEEEEECCC FHQVRAALAKDEKIEQTLNGLSDSDVMAKIGHKGLFPEGRFFPDTYRFVRGVTDTELLKK HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH AFDRLDEVLAKEWEKRSADVPYTEPYQALIMASLVEKETGVPQERGQIAGVFVRRMALGM HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC QLQTDPTVIYGLGDRYNGKLTRAHLKEATPYNTYMIPGLPPTPIAMVGREAIHAALNPVD EECCCCEEEEECCCCCCCCCHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCC GTSLYFVARGDGSHVFSDDLDAHNNAVREYQLKRRADYRSSPAPATAPEAAPEAEEAIPA CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCC ASPDTAPESLPQPPAQAPAPTPEPEASAPQNTQ CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]