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The map label for this gene is yegW [C]

Identifier: 77460359

GI number: 77460359

Start: 4676637

End: 4677350

Strand: Reverse

Name: yegW [C]

Synonym: Pfl01_4138

Alternate gene names: 77460359

Gene position: 4677350-4676637 (Counterclockwise)

Preceding gene: 77460360

Following gene: 77460358

Centisome position: 72.65

GC content: 61.2

Gene sequence:

>714_bases
ATGATTAGACAGGTACGATTTGACAAGAAACAACGGGTGGTCGACGAACTCGTCCGACGCATCGAAAGCGGCCTCATGGA
GGACGGCTTTCTGTTGCCCGGCGAGCATCAGTTGGCTCAGGAATTCAACGTCAGCCGAGGCACGTTGCGCGAAGCGCTGG
CCGAACTGAAGCGGCGCAATTACATCGCCACGCAAAGCGGGGTCGGTTCCATCGTCACGTTTGACGGGGTGGTACTCGAC
CAGCGCAGCGGCTGGGCCCAGGCCCTGGCCGACAGCGGGGCGCTGATCAATACCGACGTTTTGCGCCTGGAAGCCGTGAC
CCGCGAGGATCTGTTGCCGCGTTTCGGCTCCGATCAATTCATTCTTCTCGAACGTCGCCGCCGTTCCAACGATGGCACGG
CGGTGTCCCTTGAACGCTCTCTGATGCCCGCCAGCGGAGGCCTGGAAAGCCTGCCGCGAGTGGGCCTGATCGATAACTCG
CTGACCATCACCCTGGCCGCCTACGGCTACATCGGCGAGCGCGGCGATCAGTGGATCGGTGCCGAACCGCTCAACGCCGT
GGATGCCAAACTGCTCGGCCGTCCCGAAGGCACGGTATTCCTCAAGGCGCTGCGCACCACGTATGACCGGCAAAACCGTT
TCATGGAACAGGTCGAAAGCCTGCTCGACCCGGTGCATTTCCGGCTGCACCTGCAATTTGGAGAATCGAAATGA

Upstream 100 bases:

>100_bases
GCGGCGTTCCGATGAGGGCGCTCTTGATCTTCCCGCCTTCCGTCACCCCACCCAAAATTTCCCTTGCCCGTCTCAACCCG
TTTCGGTTATCACTTTGTAC

Downstream 100 bases:

>100_bases
CCGCCCTTGACCGTGCCCTGGGCGCGTTTTACGGCCTGGCCCTCGGCGACGCGTTGGGCATGCCGACCCAATCCCTGAAC
CGCGAAACCATCAAGCAGCG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcription Regulator; Transcriptional Regulator GntR Family; Transcriptional Regulator GntR; Transcriptional Regulator; GntR Family Regulatory Protein

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MIRQVRFDKKQRVVDELVRRIESGLMEDGFLLPGEHQLAQEFNVSRGTLREALAELKRRNYIATQSGVGSIVTFDGVVLD
QRSGWAQALADSGALINTDVLRLEAVTREDLLPRFGSDQFILLERRRRSNDGTAVSLERSLMPASGGLESLPRVGLIDNS
LTITLAAYGYIGERGDQWIGAEPLNAVDAKLLGRPEGTVFLKALRTTYDRQNRFMEQVESLLDPVHFRLHLQFGESK

Sequences:

>Translated_237_residues
MIRQVRFDKKQRVVDELVRRIESGLMEDGFLLPGEHQLAQEFNVSRGTLREALAELKRRNYIATQSGVGSIVTFDGVVLD
QRSGWAQALADSGALINTDVLRLEAVTREDLLPRFGSDQFILLERRRRSNDGTAVSLERSLMPASGGLESLPRVGLIDNS
LTITLAAYGYIGERGDQWIGAEPLNAVDAKLLGRPEGTVFLKALRTTYDRQNRFMEQVESLLDPVHFRLHLQFGESK
>Mature_237_residues
MIRQVRFDKKQRVVDELVRRIESGLMEDGFLLPGEHQLAQEFNVSRGTLREALAELKRRNYIATQSGVGSIVTFDGVVLD
QRSGWAQALADSGALINTDVLRLEAVTREDLLPRFGSDQFILLERRRRSNDGTAVSLERSLMPASGGLESLPRVGLIDNS
LTITLAAYGYIGERGDQWIGAEPLNAVDAKLLGRPEGTVFLKALRTTYDRQNRFMEQVESLLDPVHFRLHLQFGESK

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26568; Mature: 26568

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRQVRFDKKQRVVDELVRRIESGLMEDGFLLPGEHQLAQEFNVSRGTLREALAELKRRN
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCC
YIATQSGVGSIVTFDGVVLDQRSGWAQALADSGALINTDVLRLEAVTREDLLPRFGSDQF
EEEECCCCCCEEEECCEEEECCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCE
ILLERRRRSNDGTAVSLERSLMPASGGLESLPRVGLIDNSLTITLAAYGYIGERGDQWIG
EEEEHHCCCCCCCEEEEHHHCCCCCCCHHHCCCCCEECCCEEEEEEEECCCCCCCCCCCC
AEPLNAVDAKLLGRPEGTVFLKALRTTYDRQNRFMEQVESLLDPVHFRLHLQFGESK
CCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
>Mature Secondary Structure
MIRQVRFDKKQRVVDELVRRIESGLMEDGFLLPGEHQLAQEFNVSRGTLREALAELKRRN
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCC
YIATQSGVGSIVTFDGVVLDQRSGWAQALADSGALINTDVLRLEAVTREDLLPRFGSDQF
EEEECCCCCCEEEECCEEEECCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCE
ILLERRRRSNDGTAVSLERSLMPASGGLESLPRVGLIDNSLTITLAAYGYIGERGDQWIG
EEEEHHCCCCCCCEEEEHHHCCCCCCCHHHCCCCCEECCCEEEEEEEECCCCCCCCCCCC
AEPLNAVDAKLLGRPEGTVFLKALRTTYDRQNRFMEQVESLLDPVHFRLHLQFGESK
CCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA