| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yegU [H]
Identifier: 77460358
GI number: 77460358
Start: 4675642
End: 4676640
Strand: Reverse
Name: yegU [H]
Synonym: Pfl01_4137
Alternate gene names: 77460358
Gene position: 4676640-4675642 (Counterclockwise)
Preceding gene: 77460359
Following gene: 77460357
Centisome position: 72.64
GC content: 65.67
Gene sequence:
>999_bases ATGACCGCCCTTGACCGTGCCCTGGGCGCGTTTTACGGCCTGGCCCTCGGCGACGCGTTGGGCATGCCGACCCAATCCCT GAACCGCGAAACCATCAAGCAGCGCTTCGGCCAGATTACCGAACTGCAGGACGCCGGCCCCTTGCAGCCGATTGCCGCGA ACATGCCCAAGGGCTCGATTACCGATGACACCGAACAGGCGATTCTGGTCGGCGAGTTGCTGGTTGAAGGCAAGGGCCGG ATCGAACCGGCGGTGCTCGCGCAACGGCTGATCGAATGGGAAGCCGAGATGCAGGCCAAGGGCTCGCAGGACTTGCTCGG TCCGTCGACCAAACGTGCGATCGAAATGATCCTCGCCGGCCACTCGCCGGAAGAGGCCGGACGTTACGGCACCACCAACG GCGCAGCGATGCGCATCACCCCGGTGGGGATCGCGGCGGATGTCGCCGACTCCGAACGCTTTATCGCGGCGGTGGTGCAG GCCTGTCAGGTCACTCACAACACTACGCTGGGGATTTCCAGCGCAGCGGCGGTGGCGGCGGTGGTTTCGGCCGGCATCAA CGGTCTGGATCTGGGTGAGGCGCTGAACCTCGGCCAACAGATCGCCCAGCAAGCGGAGTCTCACGGGCACTGGGTGGCCG GCGGGCGTATCGCGTCGCGGATCAGTTGGGCGCGCAGCATCAGTGTCGAAAGCGACCCGGTGTTGCTCGCGGATCTGCTG TACGACGTGATCGGCACCTCGGTGGCGTCGCAGGAATCGGTCGTAGTGTCGTTCGCCCTCGCGCAGCAAGTCGCGGTCGG TGAAATGACGCCGTTCGATGCGCTGTGCATGGCCGCGAGCCTGGGTGGCGACACCGACACCATCGCCGCGATTCTCGGCG CCATGCTCGGGGCCTGCCTGGGCCTGCAGAGCTGGCCGGTGCCGATGATCGAGACGGTGAAGGCCGTCAATGGTCTGGAG CTGGAACCGTTGGTGACAGGGCTGTTGGCCTTGCGCTGA
Upstream 100 bases:
>100_bases TGCGCACCACGTATGACCGGCAAAACCGTTTCATGGAACAGGTCGAAAGCCTGCTCGACCCGGTGCATTTCCGGCTGCAC CTGCAATTTGGAGAATCGAA
Downstream 100 bases:
>100_bases TTGAACTGACGTTATCGTCGGATCGCCGCCCGGAGCAAGTTTGCTCCCACAGGGGTAACGCCGTACTTGTGGGAGCGAGC TTGCTCGAGATGGCCGCGCC
Product: ADP-ribosylation/crystallin J1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTALDRALGAFYGLALGDALGMPTQSLNRETIKQRFGQITELQDAGPLQPIAANMPKGSITDDTEQAILVGELLVEGKGR IEPAVLAQRLIEWEAEMQAKGSQDLLGPSTKRAIEMILAGHSPEEAGRYGTTNGAAMRITPVGIAADVADSERFIAAVVQ ACQVTHNTTLGISSAAAVAAVVSAGINGLDLGEALNLGQQIAQQAESHGHWVAGGRIASRISWARSISVESDPVLLADLL YDVIGTSVASQESVVVSFALAQQVAVGEMTPFDALCMAASLGGDTDTIAAILGAMLGACLGLQSWPVPMIETVKAVNGLE LEPLVTGLLALR
Sequences:
>Translated_332_residues MTALDRALGAFYGLALGDALGMPTQSLNRETIKQRFGQITELQDAGPLQPIAANMPKGSITDDTEQAILVGELLVEGKGR IEPAVLAQRLIEWEAEMQAKGSQDLLGPSTKRAIEMILAGHSPEEAGRYGTTNGAAMRITPVGIAADVADSERFIAAVVQ ACQVTHNTTLGISSAAAVAAVVSAGINGLDLGEALNLGQQIAQQAESHGHWVAGGRIASRISWARSISVESDPVLLADLL YDVIGTSVASQESVVVSFALAQQVAVGEMTPFDALCMAASLGGDTDTIAAILGAMLGACLGLQSWPVPMIETVKAVNGLE LEPLVTGLLALR >Mature_331_residues TALDRALGAFYGLALGDALGMPTQSLNRETIKQRFGQITELQDAGPLQPIAANMPKGSITDDTEQAILVGELLVEGKGRI EPAVLAQRLIEWEAEMQAKGSQDLLGPSTKRAIEMILAGHSPEEAGRYGTTNGAAMRITPVGIAADVADSERFIAAVVQA CQVTHNTTLGISSAAAVAAVVSAGINGLDLGEALNLGQQIAQQAESHGHWVAGGRIASRISWARSISVESDPVLLADLLY DVIGTSVASQESVVVSFALAQQVAVGEMTPFDALCMAASLGGDTDTIAAILGAMLGACLGLQSWPVPMIETVKAVNGLEL EPLVTGLLALR
Specific function: Unknown
COG id: COG1397
COG function: function code O; ADP-ribosylglycohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ADP-ribosylglycohydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1788416, Length=329, Percent_Identity=31.6109422492401, Blast_Score=156, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005502 [H]
Pfam domain/function: PF03747 ADP_ribosyl_GH [H]
EC number: NA
Molecular weight: Translated: 34403; Mature: 34272
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALDRALGAFYGLALGDALGMPTQSLNRETIKQRFGQITELQDAGPLQPIAANMPKGSI CCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHCCHHHHCCCCCCCHHHCCCCCCCC TDDTEQAILVGELLVEGKGRIEPAVLAQRLIEWEAEMQAKGSQDLLGPSTKRAIEMILAG CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC HSPEEAGRYGTTNGAAMRITPVGIAADVADSERFIAAVVQACQVTHNTTLGISSAAAVAA CCHHHHCCCCCCCCCEEEEEECCEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VVSAGINGLDLGEALNLGQQIAQQAESHGHWVAGGRIASRISWARSISVESDPVLLADLL HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCCCHHHHHHH YDVIGTSVASQESVVVSFALAQQVAVGEMTPFDALCMAASLGGDTDTIAAILGAMLGACL HHHHCCHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GLQSWPVPMIETVKAVNGLELEPLVTGLLALR CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure TALDRALGAFYGLALGDALGMPTQSLNRETIKQRFGQITELQDAGPLQPIAANMPKGSI CHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHCCHHHHCCCCCCCHHHCCCCCCCC TDDTEQAILVGELLVEGKGRIEPAVLAQRLIEWEAEMQAKGSQDLLGPSTKRAIEMILAG CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC HSPEEAGRYGTTNGAAMRITPVGIAADVADSERFIAAVVQACQVTHNTTLGISSAAAVAA CCHHHHCCCCCCCCCEEEEEECCEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VVSAGINGLDLGEALNLGQQIAQQAESHGHWVAGGRIASRISWARSISVESDPVLLADLL HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHCCCCCCCHHHHHHH YDVIGTSVASQESVVVSFALAQQVAVGEMTPFDALCMAASLGGDTDTIAAILGAMLGACL HHHHCCHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GLQSWPVPMIETVKAVNGLELEPLVTGLLALR CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]