| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460347
Identifier: 77460347
GI number: 77460347
Start: 4668204
End: 4668677
Strand: Reverse
Name: 77460347
Synonym: Pfl01_4126
Alternate gene names: NA
Gene position: 4668677-4668204 (Counterclockwise)
Preceding gene: 77460348
Following gene: 77460346
Centisome position: 72.51
GC content: 39.87
Gene sequence:
>474_bases ATGGCTTTCTTGCTTTGCACTTCCTGTGCGATGAATCATGGTAAGCCCATTGCTCATTTACAATACGTTGGTGTTGAACG TTATTTGGATAGGAATATTTATCAGGTGCGTTTTACGTCTGATGTTGATGTTGTCAATCTTTTTAAATCAAAAATAAGCC AGACGCTGCTGTGTTCTTTTGAGGACGATTTTGATTTTTCGGCACCTCACTCTGCGGGTAGATACGGAGAGGGTTTTGTC GAGCCTGAAATTTCAAGTGCCGGGCCGGTTTACAGGGCGGATGTTTTATTTTTCAAAAGAAAAAACGATACCAGTGAAAA AATCATTGAAGGTGAGGCATTGAGGTCTTTATTAGTGGGCCGAGAGTCTATTGTCTGTAAGGTCAGAATTAATTCCTACT CCTATAAAATATATTTGTCGGAGGACATGAAAGTTCCAACGGCAGATCTGTTAAGAGAGATCGATAAGTTTTAA
Upstream 100 bases:
>100_bases ACATCAGTCCTGCAAAGTGGCCTCTCGGCCAGAGACGCTTTGATGCAGGTTGTTGTTACTCATTTTAAAGGACGGAAATG TGCGTAATATAATTTTATGT
Downstream 100 bases:
>100_bases ACGGGATGCGATCCGTCCGGACAGGCGGTGCTCGTTGCTCAATTCGCTGTCCGGGCTTTTAAGAAAGGCAAATCCCAAAA TATGGGATGCAAAATTACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MAFLLCTSCAMNHGKPIAHLQYVGVERYLDRNIYQVRFTSDVDVVNLFKSKISQTLLCSFEDDFDFSAPHSAGRYGEGFV EPEISSAGPVYRADVLFFKRKNDTSEKIIEGEALRSLLVGRESIVCKVRINSYSYKIYLSEDMKVPTADLLREIDKF
Sequences:
>Translated_157_residues MAFLLCTSCAMNHGKPIAHLQYVGVERYLDRNIYQVRFTSDVDVVNLFKSKISQTLLCSFEDDFDFSAPHSAGRYGEGFV EPEISSAGPVYRADVLFFKRKNDTSEKIIEGEALRSLLVGRESIVCKVRINSYSYKIYLSEDMKVPTADLLREIDKF >Mature_156_residues AFLLCTSCAMNHGKPIAHLQYVGVERYLDRNIYQVRFTSDVDVVNLFKSKISQTLLCSFEDDFDFSAPHSAGRYGEGFVE PEISSAGPVYRADVLFFKRKNDTSEKIIEGEALRSLLVGRESIVCKVRINSYSYKIYLSEDMKVPTADLLREIDKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17896; Mature: 17764
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFLLCTSCAMNHGKPIAHLQYVGVERYLDRNIYQVRFTSDVDVVNLFKSKISQTLLCSF CEEEEEECHHHCCCCCEEEEEEHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHEEEEEC EDDFDFSAPHSAGRYGEGFVEPEISSAGPVYRADVLFFKRKNDTSEKIIEGEALRSLLVG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHCC RESIVCKVRINSYSYKIYLSEDMKVPTADLLREIDKF CCEEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHCC >Mature Secondary Structure AFLLCTSCAMNHGKPIAHLQYVGVERYLDRNIYQVRFTSDVDVVNLFKSKISQTLLCSF EEEEEECHHHCCCCCEEEEEEHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHEEEEEC EDDFDFSAPHSAGRYGEGFVEPEISSAGPVYRADVLFFKRKNDTSEKIIEGEALRSLLVG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHCC RESIVCKVRINSYSYKIYLSEDMKVPTADLLREIDKF CCEEEEEEEECCEEEEEEECCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA