| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460348
Identifier: 77460348
GI number: 77460348
Start: 4668691
End: 4669431
Strand: Reverse
Name: 77460348
Synonym: Pfl01_4127
Alternate gene names: NA
Gene position: 4669431-4668691 (Counterclockwise)
Preceding gene: 77460349
Following gene: 77460347
Centisome position: 72.52
GC content: 46.69
Gene sequence:
>741_bases ATGACTACTGAAAATCCTGCTCTGAAAGGCTGTAAAAGACTGGTCGTGACCCACGACCTGACCTGCAAAACGGACGGAAC AGTCAAGCAGGCCACGATCACTCCCAAAAAGATTGTTCTGTTTTTTGTGGGTGGTGCGGGTGATAAAGAAAGTTATTACG GCACAGGCCCCAATAATAACGTTGCTGACGTCATGAAGGTGTTCGTCAGGGATATGGAGGCTGAGGGTATTTGTTCTGGT AATTATGATATCCACCATGTTGGTTATAACTATTTTATTAGTGAAGATGATCTGAAAAAGAATGTGCTGGAGAAGATTGC TGATGTGACCACGCCTGTATATATCATTGGGCATAGCTTGGGCGGATGGAATGGTGCGCACCTGTCAGCTGTATTGACTG ATAAGGGATATCGAATTTCGTGTCTGGTTACACTCGATCCGGTTGGCGAAGGAAAAATTGTGTGGGGAGTTTCTAACATC TACCGTCAGGAGCCGAAGCCGAAGGCGGAATATTGGGTTAACGTCAGAGCCGATGCCAAAGACTGGAATTTTTCCGATCT CGTAGCCGATTTTGGAGAGCAATGGGATATGAAAAGTGGGCCCAATATGAACGGGCGAGTGAATGTGAATCACGCCGATG CCTGGGTCATCTTCACATCAGTCCTGCAAAGTGGCCTCTCGGCCAGAGACGCTTTGATGCAGGTTGTTGTTACTCATTTT AAAGGACGGAAATGTGCGTAA
Upstream 100 bases:
>100_bases TGGGAGCGTGGAGCACGGCGTAACCAATGACGCGGGGTTTACCCATACCGTGAGTTCGCATTTGCCTGAGTCGATCAAGC TGTTCGTGGAGTAGGAAGAT
Downstream 100 bases:
>100_bases TATAATTTTATGTATGGCTTTCTTGCTTTGCACTTCCTGTGCGATGAATCATGGTAAGCCCATTGCTCATTTACAATACG TTGGTGTTGAACGTTATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTTENPALKGCKRLVVTHDLTCKTDGTVKQATITPKKIVLFFVGGAGDKESYYGTGPNNNVADVMKVFVRDMEAEGICSG NYDIHHVGYNYFISEDDLKKNVLEKIADVTTPVYIIGHSLGGWNGAHLSAVLTDKGYRISCLVTLDPVGEGKIVWGVSNI YRQEPKPKAEYWVNVRADAKDWNFSDLVADFGEQWDMKSGPNMNGRVNVNHADAWVIFTSVLQSGLSARDALMQVVVTHF KGRKCA
Sequences:
>Translated_246_residues MTTENPALKGCKRLVVTHDLTCKTDGTVKQATITPKKIVLFFVGGAGDKESYYGTGPNNNVADVMKVFVRDMEAEGICSG NYDIHHVGYNYFISEDDLKKNVLEKIADVTTPVYIIGHSLGGWNGAHLSAVLTDKGYRISCLVTLDPVGEGKIVWGVSNI YRQEPKPKAEYWVNVRADAKDWNFSDLVADFGEQWDMKSGPNMNGRVNVNHADAWVIFTSVLQSGLSARDALMQVVVTHF KGRKCA >Mature_245_residues TTENPALKGCKRLVVTHDLTCKTDGTVKQATITPKKIVLFFVGGAGDKESYYGTGPNNNVADVMKVFVRDMEAEGICSGN YDIHHVGYNYFISEDDLKKNVLEKIADVTTPVYIIGHSLGGWNGAHLSAVLTDKGYRISCLVTLDPVGEGKIVWGVSNIY RQEPKPKAEYWVNVRADAKDWNFSDLVADFGEQWDMKSGPNMNGRVNVNHADAWVIFTSVLQSGLSARDALMQVVVTHFK GRKCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27134; Mature: 27003
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTENPALKGCKRLVVTHDLTCKTDGTVKQATITPKKIVLFFVGGAGDKESYYGTGPNNN CCCCCHHHHHHHEEEEEECEEECCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCC VADVMKVFVRDMEAEGICSGNYDIHHVGYNYFISEDDLKKNVLEKIADVTTPVYIIGHSL HHHHHHHHHHHCCCCCEECCCCEEEEECEEEEECCCHHHHHHHHHHHHHCCCEEEEEECC GGWNGAHLSAVLTDKGYRISCLVTLDPVGEGKIVWGVSNIYRQEPKPKAEYWVNVRADAK CCCCCCEEEEEEECCCEEEEEEEEECCCCCCEEEEEHHHHHHCCCCCCCCEEEEEEECCC DWNFSDLVADFGEQWDMKSGPNMNGRVNVNHADAWVIFTSVLQSGLSARDALMQVVVTHF CCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHC KGRKCA CCCCCC >Mature Secondary Structure TTENPALKGCKRLVVTHDLTCKTDGTVKQATITPKKIVLFFVGGAGDKESYYGTGPNNN CCCCHHHHHHHEEEEEECEEECCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCC VADVMKVFVRDMEAEGICSGNYDIHHVGYNYFISEDDLKKNVLEKIADVTTPVYIIGHSL HHHHHHHHHHHCCCCCEECCCCEEEEECEEEEECCCHHHHHHHHHHHHHCCCEEEEEECC GGWNGAHLSAVLTDKGYRISCLVTLDPVGEGKIVWGVSNIYRQEPKPKAEYWVNVRADAK CCCCCCEEEEEEECCCEEEEEEEEECCCCCCEEEEEHHHHHHCCCCCCCCEEEEEEECCC DWNFSDLVADFGEQWDMKSGPNMNGRVNVNHADAWVIFTSVLQSGLSARDALMQVVVTHF CCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHC KGRKCA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA