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The map label for this gene is etfB [H]

Identifier: 77460338

GI number: 77460338

Start: 4657791

End: 4658540

Strand: Reverse

Name: etfB [H]

Synonym: Pfl01_4117

Alternate gene names: 77460338

Gene position: 4658540-4657791 (Counterclockwise)

Preceding gene: 77460340

Following gene: 77460337

Centisome position: 72.36

GC content: 59.07

Gene sequence:

>750_bases
ATGAAGGTTCTTGTAGCTGTCAAACGCGTTGTGGATTACAACGTCAAGGTTCGCGTCAAGGCGGACAATTCCGGCGTAGA
CCTCGCCAACGTCAAGATGTCGATGAACCCGTTCTGCGAAATCGCAGTGGAAGAAGCCGTACGCCTGAAAGAAAAAGGCG
TTGCGACTGAAATCGTCGTCGTCTCCATCGGCCCGTCCACCGCTCAGGAACAGCTGCGTACCGCACTGGCTCTGGGTGCC
GACCGCGCCATCCTCGTCGAATCCGCTGAAGACCTGACTTCCCTGGCCGTGGCCAAGCTGCTCAAGGCCGTGGTCGACAA
GGAACAGCCTCAGCTGGTGATCCTGGGCAAACAGGCCATCGACAGCGACAACAACCAGACCGGCCAGATGCTCGCTGCAC
TGAGCGGCTACGGTCAGGGCACTTTCGCCTCGAAAGTCGAAGTCTCCGGCGACAGCGTTGCCGTGACCCGCGAAATCGAC
GGCGGCGCGCAGACCGTTTCCCTGAAACTGCCAGCGATCGTCACCACCGACCTGCGTTTGAACGAGCCGCGCTACGCGTC
CCTGCCAAACATCATGAAAGCCAAGAAGAAGCCTCTCGAGACGCTGACTCCGGACGCTTTGGGCGTTTCCACCGCCTCCA
CCAACAAGACCCTGAAAGTCGAAGCGCCAGCTGCACGCAGCGCGGGCATCAAGGTCAAGTCGGTGGCTGAACTGGTCGAG
AAACTGAAAAACGAAGCGAAGGTAATCTGA

Upstream 100 bases:

>100_bases
GTTCAGCCGGCGTTTTTAGAGGTGCCCTTGTGCCCGATGAGCATCAACCGCCAGGTTCGCCTAGGCGACTTTCTTTTCAC
CGGAGAGTAACGAGGAATCC

Downstream 100 bases:

>100_bases
TCATGACTATCTTGGTAATCGCCGAACACGACAACAAGGTGCTGGCTCCGGCCACCCTGAACACCGTGGCTGCCGCTGCC
AAAATCGGCGGCGACATCCA

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKVLVAVKRVVDYNVKVRVKADNSGVDLANVKMSMNPFCEIAVEEAVRLKEKGVATEIVVVSIGPSTAQEQLRTALALGA
DRAILVESAEDLTSLAVAKLLKAVVDKEQPQLVILGKQAIDSDNNQTGQMLAALSGYGQGTFASKVEVSGDSVAVTREID
GGAQTVSLKLPAIVTTDLRLNEPRYASLPNIMKAKKKPLETLTPDALGVSTASTNKTLKVEAPAARSAGIKVKSVAELVE
KLKNEAKVI

Sequences:

>Translated_249_residues
MKVLVAVKRVVDYNVKVRVKADNSGVDLANVKMSMNPFCEIAVEEAVRLKEKGVATEIVVVSIGPSTAQEQLRTALALGA
DRAILVESAEDLTSLAVAKLLKAVVDKEQPQLVILGKQAIDSDNNQTGQMLAALSGYGQGTFASKVEVSGDSVAVTREID
GGAQTVSLKLPAIVTTDLRLNEPRYASLPNIMKAKKKPLETLTPDALGVSTASTNKTLKVEAPAARSAGIKVKSVAELVE
KLKNEAKVI
>Mature_249_residues
MKVLVAVKRVVDYNVKVRVKADNSGVDLANVKMSMNPFCEIAVEEAVRLKEKGVATEIVVVSIGPSTAQEQLRTALALGA
DRAILVESAEDLTSLAVAKLLKAVVDKEQPQLVILGKQAIDSDNNQTGQMLAALSGYGQGTFASKVEVSGDSVAVTREID
GGAQTVSLKLPAIVTTDLRLNEPRYASLPNIMKAKKKPLETLTPDALGVSTASTNKTLKVEAPAARSAGIKVKSVAELVE
KLKNEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=252, Percent_Identity=58.3333333333333, Blast_Score=286, Evalue=1e-77,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=56.9620253164557, Blast_Score=261, Evalue=4e-70,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=53.3596837944664, Blast_Score=239, Evalue=8e-64,
Organism=Saccharomyces cerevisiae, GI6321646, Length=256, Percent_Identity=48.4375, Blast_Score=218, Evalue=6e-58,
Organism=Drosophila melanogaster, GI24651147, Length=251, Percent_Identity=54.1832669322709, Blast_Score=238, Evalue=3e-63,
Organism=Drosophila melanogaster, GI24651145, Length=251, Percent_Identity=54.1832669322709, Blast_Score=238, Evalue=3e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26316; Mature: 26316

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVAVKRVVDYNVKVRVKADNSGVDLANVKMSMNPFCEIAVEEAVRLKEKGVATEIVV
CHHHHEEHHHHCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE
VSIGPSTAQEQLRTALALGADRAILVESAEDLTSLAVAKLLKAVVDKEQPQLVILGKQAI
EEECCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHC
DSDNNQTGQMLAALSGYGQGTFASKVEVSGDSVAVTREIDGGAQTVSLKLPAIVTTDLRL
CCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEECEEEEECEEE
NEPRYASLPNIMKAKKKPLETLTPDALGVSTASTNKTLKVEAPAARSAGIKVKSVAELVE
CCCCCCCCCHHHHHHCCCCHHCCCCHHCCEECCCCCEEEEECCCCCCCCCCHHHHHHHHH
KLKNEAKVI
HHHHHCCCC
>Mature Secondary Structure
MKVLVAVKRVVDYNVKVRVKADNSGVDLANVKMSMNPFCEIAVEEAVRLKEKGVATEIVV
CHHHHEEHHHHCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE
VSIGPSTAQEQLRTALALGADRAILVESAEDLTSLAVAKLLKAVVDKEQPQLVILGKQAI
EEECCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHC
DSDNNQTGQMLAALSGYGQGTFASKVEVSGDSVAVTREIDGGAQTVSLKLPAIVTTDLRL
CCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEECEEEEECEEE
NEPRYASLPNIMKAKKKPLETLTPDALGVSTASTNKTLKVEAPAARSAGIKVKSVAELVE
CCCCCCCCCHHHHHHCCCCHHCCCCHHCCEECCCCCEEEEECCCCCCCCCCHHHHHHHHH
KLKNEAKVI
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]