Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77460335

Identifier: 77460335

GI number: 77460335

Start: 4655576

End: 4655932

Strand: Reverse

Name: 77460335

Synonym: Pfl01_4114

Alternate gene names: NA

Gene position: 4655932-4655576 (Counterclockwise)

Preceding gene: 77460336

Following gene: 77460334

Centisome position: 72.31

GC content: 59.66

Gene sequence:

>357_bases
GTGAGTAATCGACTTCTTTTCGCGGCCATGGCCGTTCTGGCCCTGGCCGGTTGCGCCAGCGATCCGGCGCCCAACGAACA
AATGCGCCTGACTGAGCAGGCCATTGAGCAAGCCAAAGCCGTGGGCGCCACCGCCGAAGATGTGCCGGAAATGAAACTGG
CAGAAGATAAGTTCAACCGGGCCAAAGGCAGCATGGCGGGTGAGTCCTACAAGAATGCGCGGATGCGCTTCGAACAGGCT
GAGCTCGACGCACGTCTGGCGGAAGCCAAAGTGTTGACCCAGAAGAGCGAAGAGCAAGTGAACGTGCTCAACACCCGCAT
CGTCCGACTGCGCAAGCAACTGGGGGATGCCCAATGA

Upstream 100 bases:

>100_bases
GACGGAAGCCGCGCTGCAACGCAACATCGAGCGCTGGAAGGCGCAGCAGCAACAGCCGCCGCAACCACCTGTCAGCGCCC
CAAAACAGTAGGGATTCTTA

Downstream 100 bases:

>100_bases
GCCTGAAGTCCAAAAACCTCGGCGCTCTGATCCTCGCCGGTTGCGCCAGCCTGTACGGCTGCGCCGCTCAGCACAGCGAA
TCCGCATTGCAGCAGGCCAG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MSNRLLFAAMAVLALAGCASDPAPNEQMRLTEQAIEQAKAVGATAEDVPEMKLAEDKFNRAKGSMAGESYKNARMRFEQA
ELDARLAEAKVLTQKSEEQVNVLNTRIVRLRKQLGDAQ

Sequences:

>Translated_118_residues
MSNRLLFAAMAVLALAGCASDPAPNEQMRLTEQAIEQAKAVGATAEDVPEMKLAEDKFNRAKGSMAGESYKNARMRFEQA
ELDARLAEAKVLTQKSEEQVNVLNTRIVRLRKQLGDAQ
>Mature_117_residues
SNRLLFAAMAVLALAGCASDPAPNEQMRLTEQAIEQAKAVGATAEDVPEMKLAEDKFNRAKGSMAGESYKNARMRFEQAE
LDARLAEAKVLTQKSEEQVNVLNTRIVRLRKQLGDAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12966; Mature: 12835

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRLLFAAMAVLALAGCASDPAPNEQMRLTEQAIEQAKAVGATAEDVPEMKLAEDKFNR
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHH
AKGSMAGESYKNARMRFEQAELDARLAEAKVLTQKSEEQVNVLNTRIVRLRKQLGDAQ
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNRLLFAAMAVLALAGCASDPAPNEQMRLTEQAIEQAKAVGATAEDVPEMKLAEDKFNR
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHH
AKGSMAGESYKNARMRFEQAELDARLAEAKVLTQKSEEQVNVLNTRIVRLRKQLGDAQ
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA