| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77460310
Identifier: 77460310
GI number: 77460310
Start: 4626389
End: 4627024
Strand: Reverse
Name: 77460310
Synonym: Pfl01_4089
Alternate gene names: NA
Gene position: 4627024-4626389 (Counterclockwise)
Preceding gene: 77460311
Following gene: 77460309
Centisome position: 71.87
GC content: 64.94
Gene sequence:
>636_bases ATGTCTGCACGCCTGCTCTATGTGATGGATCCGATGTGTTCGTGGTGCTGGGGATTTGCCCCGGTGGCCAAGGCATTGGT GGAGCAGGCGCAGGCCGCCGGGGTGGAACTGCACCTGGTGGTCGGCGGGTTGCGCACCGGTAGCGGTTCGGCGCTGGAGC CAACCACCCGGCGCTACATTCTCGAACACTGGCAGGCGGTCACCGAGGCCACCGGCCAGCCGTTCAAGTTCGAAGGCGCG TTGCCCGACGGTTTTGTCTACGATACCGAGCCTGCCTGCCGGGCCATCGTTACGGCGCGCAGCCTGGCGCCGGATTGCGC GTGGAAACTGGTCGGGCTGATCCAGCACGCGTTTTACGCTGAAGGTCGCGATGTCACCCAGGCCAGCGTTCTGGTGGAGC TGGCGGAGAAGGCCGGCGTCCCGCGCATCGAATTTGCTGCCCTGTTCGATCATGCCGATCAACACAAGGCGACCCAGGCC GATTTTACTTGGGTCCAGGATCTGGGCATCGCCGGATTCCCGACCCTGCTCGCCGAACGCAACGGCCAACTGGCGTTGCT GACCAACGGCTACCAGCCGCTCAGTGAACTGTCGCCGCTGCTCGGTCGATGGCTGGAGCGCGCGGCCTGTGTCTGA
Upstream 100 bases:
>100_bases GCGCCATCGACCGTCAGAAGCAGATCGAACTGGCAAAAGCGCGCAACATGCCGCACCCGATCGGCTACAACTATAAGCAA GCATCCACCGAGGCTTAATC
Downstream 100 bases:
>100_bases CCCGGCCGATGACACGCCAGCCGTCAAGCGTGTCGACCGGCTGAGCTGGGCTGAAGTCCGGCGACTGGCACTTCATCACA AAAAATCCCTGTGGATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: DSBA Oxidoreductase; Thioredoxin; Thioredoxin Domain-Containing Protein; Thioredoxin-Like Fold; Dithiol-Disulfide Isomerase; Dsba Oxidoreductase; DsbA FrnE Like Protein; Protein-Disulfide Isomerase-Like Protein; Thioredoxin Domain-Containing Protein DsbA Family
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSARLLYVMDPMCSWCWGFAPVAKALVEQAQAAGVELHLVVGGLRTGSGSALEPTTRRYILEHWQAVTEATGQPFKFEGA LPDGFVYDTEPACRAIVTARSLAPDCAWKLVGLIQHAFYAEGRDVTQASVLVELAEKAGVPRIEFAALFDHADQHKATQA DFTWVQDLGIAGFPTLLAERNGQLALLTNGYQPLSELSPLLGRWLERAACV
Sequences:
>Translated_211_residues MSARLLYVMDPMCSWCWGFAPVAKALVEQAQAAGVELHLVVGGLRTGSGSALEPTTRRYILEHWQAVTEATGQPFKFEGA LPDGFVYDTEPACRAIVTARSLAPDCAWKLVGLIQHAFYAEGRDVTQASVLVELAEKAGVPRIEFAALFDHADQHKATQA DFTWVQDLGIAGFPTLLAERNGQLALLTNGYQPLSELSPLLGRWLERAACV >Mature_210_residues SARLLYVMDPMCSWCWGFAPVAKALVEQAQAAGVELHLVVGGLRTGSGSALEPTTRRYILEHWQAVTEATGQPFKFEGAL PDGFVYDTEPACRAIVTARSLAPDCAWKLVGLIQHAFYAEGRDVTQASVLVELAEKAGVPRIEFAALFDHADQHKATQAD FTWVQDLGIAGFPTLLAERNGQLALLTNGYQPLSELSPLLGRWLERAACV
Specific function: Unknown
COG id: COG3531
COG function: function code O; Predicted protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22956; Mature: 22825
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARLLYVMDPMCSWCWGFAPVAKALVEQAQAAGVELHLVVGGLRTGSGSALEPTTRRYI CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHH LEHWQAVTEATGQPFKFEGALPDGFVYDTEPACRAIVTARSLAPDCAWKLVGLIQHAFYA HHHHHHHHHCCCCCEEECCCCCCCCEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC EGRDVTQASVLVELAEKAGVPRIEFAALFDHADQHKATQADFTWVQDLGIAGFPTLLAER CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHCC NGQLALLTNGYQPLSELSPLLGRWLERAACV CCCEEEEECCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SARLLYVMDPMCSWCWGFAPVAKALVEQAQAAGVELHLVVGGLRTGSGSALEPTTRRYI CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHH LEHWQAVTEATGQPFKFEGALPDGFVYDTEPACRAIVTARSLAPDCAWKLVGLIQHAFYA HHHHHHHHHCCCCCEEECCCCCCCCEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC EGRDVTQASVLVELAEKAGVPRIEFAALFDHADQHKATQADFTWVQDLGIAGFPTLLAER CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHCC NGQLALLTNGYQPLSELSPLLGRWLERAACV CCCEEEEECCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA