| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is rfbG [H]
Identifier: 77460273
GI number: 77460273
Start: 4577397
End: 4578386
Strand: Direct
Name: rfbG [H]
Synonym: Pfl01_4052
Alternate gene names: 77460273
Gene position: 4577397-4578386 (Clockwise)
Preceding gene: 77460258
Following gene: 77460283
Centisome position: 71.1
GC content: 52.32
Gene sequence:
>990_bases ATGGACAAGCCGAACCAAGAATCAACCCCTGAAATACAGCACTCCTCAGCACCCGATACGCCTGATCAAAACAACAAGAA AATTGCAATTCTGGTCTGTACCTATAACGGCGCGCGTTTTCTAAAAGAGCAACTCGATTCATTTATTGAACAGTCCCATC AGAACTGGGCAATCTACGTCTCGGATGACGGTTCGTCTGACGAAACACTGGACATATTGAAAGACTACCAACTTCGACTG GGCAGTGAGCGACTGGTCATTCTGCAGGGACCTCGAAAGGGGTTTGCCAGAAACTTTCTGTCACTTGTGAAAAACCCGTC AATCATTGCCGACTATTTTTGTTTCAGCGACCAAGACGATATATGGTTTAAAAACAAACTTAGCCGAAGTCTCGACTTGC TGCCTGAAGAAGGGAATGCCCCCGCCCTGTACTGCTCTCGAACTGCACTGGTCAATTCAAGTCTCGAGCCTATCGGCTAT TCGCCTCTGTTTCTGCGAACACCCTGCTTCGAGAACGCACTGGTTCAAAGCATCGCCGGCGCCAACACAATGTTGATCAA TAATGCTGCACGCGCACTTTTGCTGCGAGTAGCCGATGACGCTCCGGTCGTCGCACATGACTGGCTGACCTACTTGCTGG TCACCGGCTGCGGCGGACGGGTAATCTACGACCCGACCCCCTCTCTCCATTACCGTCAGCATGAAGGGAATCTGATCGGC GCCAACGCCGATCTGAAAAACCAGATCCTGCGACTGCGCAAAATGTTCACGGGACGCTTCAGCCAGTGGAGCACCCAGAA CCTCAGCATCCTGCATACCGTTCGCGACAGGTTGACCGACAGAAACAGGCAGGTACTGGAGCTGTTCGAAACCGCTCGAC GCAGCAGCCTGCCGGGACGGCTTTACCGGATGCGAAAAAGCGGAGTCCACCGCCAGACACTCAAAGGCAACATCAGCCTG ATCGTCGCTACGCTGATGAACAAGATCTAA
Upstream 100 bases:
>100_bases CGACCCCGCCCGATATCAAAGCCAGCCGTTAACGCCTTTTTCTTTCCGTAATATCTTCATGTCGAATCGCTGCATGATCA GGGAGCCAGAGATCAAATTC
Downstream 100 bases:
>100_bases GCGGACGACTGACGGGCCCGCGCCTGTCAGTACGACGATTTACGCTGCCAGGCCAGCCCTGTACTTCCAGGCGATGAATG CCAACGGCACGTAGGCGACC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MDKPNQESTPEIQHSSAPDTPDQNNKKIAILVCTYNGARFLKEQLDSFIEQSHQNWAIYVSDDGSSDETLDILKDYQLRL GSERLVILQGPRKGFARNFLSLVKNPSIIADYFCFSDQDDIWFKNKLSRSLDLLPEEGNAPALYCSRTALVNSSLEPIGY SPLFLRTPCFENALVQSIAGANTMLINNAARALLLRVADDAPVVAHDWLTYLLVTGCGGRVIYDPTPSLHYRQHEGNLIG ANADLKNQILRLRKMFTGRFSQWSTQNLSILHTVRDRLTDRNRQVLELFETARRSSLPGRLYRMRKSGVHRQTLKGNISL IVATLMNKI
Sequences:
>Translated_329_residues MDKPNQESTPEIQHSSAPDTPDQNNKKIAILVCTYNGARFLKEQLDSFIEQSHQNWAIYVSDDGSSDETLDILKDYQLRL GSERLVILQGPRKGFARNFLSLVKNPSIIADYFCFSDQDDIWFKNKLSRSLDLLPEEGNAPALYCSRTALVNSSLEPIGY SPLFLRTPCFENALVQSIAGANTMLINNAARALLLRVADDAPVVAHDWLTYLLVTGCGGRVIYDPTPSLHYRQHEGNLIG ANADLKNQILRLRKMFTGRFSQWSTQNLSILHTVRDRLTDRNRQVLELFETARRSSLPGRLYRMRKSGVHRQTLKGNISL IVATLMNKI >Mature_329_residues MDKPNQESTPEIQHSSAPDTPDQNNKKIAILVCTYNGARFLKEQLDSFIEQSHQNWAIYVSDDGSSDETLDILKDYQLRL GSERLVILQGPRKGFARNFLSLVKNPSIIADYFCFSDQDDIWFKNKLSRSLDLLPEEGNAPALYCSRTALVNSSLEPIGY SPLFLRTPCFENALVQSIAGANTMLINNAARALLLRVADDAPVVAHDWLTYLLVTGCGGRVIYDPTPSLHYRQHEGNLIG ANADLKNQILRLRKMFTGRFSQWSTQNLSILHTVRDRLTDRNRQVLELFETARRSSLPGRLYRMRKSGVHRQTLKGNISL IVATLMNKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 37210; Mature: 37210
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKPNQESTPEIQHSSAPDTPDQNNKKIAILVCTYNGARFLKEQLDSFIEQSHQNWAIYV CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEE SDDGSSDETLDILKDYQLRLGSERLVILQGPRKGFARNFLSLVKNPSIIADYFCFSDQDD ECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEECCCCC IWFKNKLSRSLDLLPEEGNAPALYCSRTALVNSSLEPIGYSPLFLRTPCFENALVQSIAG CHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCC ANTMLINNAARALLLRVADDAPVVAHDWLTYLLVTGCGGRVIYDPTPSLHYRQHEGNLIG CCEEEEHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCEEE ANADLKNQILRLRKMFTGRFSQWSTQNLSILHTVRDRLTDRNRQVLELFETARRSSLPGR CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHH LYRMRKSGVHRQTLKGNISLIVATLMNKI HHHHHHCCCCHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure MDKPNQESTPEIQHSSAPDTPDQNNKKIAILVCTYNGARFLKEQLDSFIEQSHQNWAIYV CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEE SDDGSSDETLDILKDYQLRLGSERLVILQGPRKGFARNFLSLVKNPSIIADYFCFSDQDD ECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEECCCCC IWFKNKLSRSLDLLPEEGNAPALYCSRTALVNSSLEPIGYSPLFLRTPCFENALVQSIAG CHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHCC ANTMLINNAARALLLRVADDAPVVAHDWLTYLLVTGCGGRVIYDPTPSLHYRQHEGNLIG CCEEEEHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCEEE ANADLKNQILRLRKMFTGRFSQWSTQNLSILHTVRDRLTDRNRQVLELFETARRSSLPGR CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHH LYRMRKSGVHRQTLKGNISLIVATLMNKI HHHHHHCCCCHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7507920; 12384590; 12704152 [H]