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The map label for this gene is yfbE [C]

Identifier: 77460283

GI number: 77460283

Start: 4586311

End: 4587438

Strand: Direct

Name: yfbE [C]

Synonym: Pfl01_4062

Alternate gene names: 77460283

Gene position: 4586311-4587438 (Clockwise)

Preceding gene: 77460273

Following gene: 77460284

Centisome position: 71.23

GC content: 56.65

Gene sequence:

>1128_bases
ATGTCGATTCAGCTGTTCGTACCAAAATTCCGTATTGATGAATGCCTCGCTGCCATTCGCGAATGCCTCGAAAAAGGCTG
GACCGGTCTCGGCTTCAAAACCGCGACCATGGAAGAGGAATGGAAAACCTATACTGGTTTGCCGAATGCCCACTTCCTGA
GCTCCAACACCGTTGGCCTGCACCTGGCAGTAGAACTGTACAAGACCAAGTTCGGCTGGAGCGATGAAGATGAAGTCATC
ACCACGCCACTGACCTTCATTTCGACCAACCACGCCATTCTGTATGCGGGCATGAAGCCTGTATTCGCGGACGTCGACGC
ATCGCTGTGCCTTGACCCGGAAAGCGTTATCGAGCGCATCACGCCAAAAACCAAGGCTCTGATCTTTGTCGGCATCGGTG
GCAACATCGGCCAGTACCAGAAAATCGTCGAAATCTGCAAAGAGCACGACATCAAGCTGATCCTGGATGCCGCCCACATG
GCAGGCACTCGCGTCAACGGCAAACATGTTGGCCAAGAAGCCGACTGCGTCGTGTTCAGCTTCCAGGCTGTGAAAAACCT
GCCGACCGCCGACTCCGGCATGATCTGCTTCAAGAGTAAAGAAGACGACGAGCGGGTTCGCAAGCTGAGCTGGCTGGGCA
TCAACAAAGACACCTTCGCTCGCACCGCCGCACAAGGCGCGTACAAGTGGATGTACGACGTTGAAGAGCTGGGCTACAAA
TACCACGGCAACTCGATCATGGCGGCCATGGGCCTGGTTCAGCTCAAATACCTGGACCTGGACAACGCCTACCGTCGTCA
GCTGGCGAGCTGGTACCGTGAGAACCTGGCCGGCCAGACCAAGATCGACATCGTCAACGTAACACCAGGTTGCGAGTCCT
CGACCCACCTGCTGCAGATTCGCGTCAAGGATCGCGATGCTCTGATGCTCGCGCTGAACGAGCACCAGATCTACCCGGGC
GTGCACTACCGCGATAACACCGAGTACTCGATGTATTCGTTCGGTGCCGGCACCTGCCCGAATGCAGCCAAGGCCAGCCA
GGAAATCCTGTCGCTGCCGATGCATCTGGGGCTGACCCGTGCCGACGTCGACACCGTGTGCGAACTGCTGATCCGCTACG
CAAAATGA

Upstream 100 bases:

>100_bases
CGCATTGATCCAGGTTCATACGCCCAACTCTTGCACAACCTCGATCGGTAAGTAAGGCAACCCCCCAGTTTGTAGCCTGA
TCTACCTATAAGGACATTCC

Downstream 100 bases:

>100_bases
AGCGCTCACTCCCCTCGTTTGATGAAGGCGCAATGCGCCTTCGCTTGATCGAAGAGAGTGACCTGCACGAGACCTTGTCC
TGGAGAAACCGGGACGAGGC

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MSIQLFVPKFRIDECLAAIRECLEKGWTGLGFKTATMEEEWKTYTGLPNAHFLSSNTVGLHLAVELYKTKFGWSDEDEVI
TTPLTFISTNHAILYAGMKPVFADVDASLCLDPESVIERITPKTKALIFVGIGGNIGQYQKIVEICKEHDIKLILDAAHM
AGTRVNGKHVGQEADCVVFSFQAVKNLPTADSGMICFKSKEDDERVRKLSWLGINKDTFARTAAQGAYKWMYDVEELGYK
YHGNSIMAAMGLVQLKYLDLDNAYRRQLASWYRENLAGQTKIDIVNVTPGCESSTHLLQIRVKDRDALMLALNEHQIYPG
VHYRDNTEYSMYSFGAGTCPNAAKASQEILSLPMHLGLTRADVDTVCELLIRYAK

Sequences:

>Translated_375_residues
MSIQLFVPKFRIDECLAAIRECLEKGWTGLGFKTATMEEEWKTYTGLPNAHFLSSNTVGLHLAVELYKTKFGWSDEDEVI
TTPLTFISTNHAILYAGMKPVFADVDASLCLDPESVIERITPKTKALIFVGIGGNIGQYQKIVEICKEHDIKLILDAAHM
AGTRVNGKHVGQEADCVVFSFQAVKNLPTADSGMICFKSKEDDERVRKLSWLGINKDTFARTAAQGAYKWMYDVEELGYK
YHGNSIMAAMGLVQLKYLDLDNAYRRQLASWYRENLAGQTKIDIVNVTPGCESSTHLLQIRVKDRDALMLALNEHQIYPG
VHYRDNTEYSMYSFGAGTCPNAAKASQEILSLPMHLGLTRADVDTVCELLIRYAK
>Mature_374_residues
SIQLFVPKFRIDECLAAIRECLEKGWTGLGFKTATMEEEWKTYTGLPNAHFLSSNTVGLHLAVELYKTKFGWSDEDEVIT
TPLTFISTNHAILYAGMKPVFADVDASLCLDPESVIERITPKTKALIFVGIGGNIGQYQKIVEICKEHDIKLILDAAHMA
GTRVNGKHVGQEADCVVFSFQAVKNLPTADSGMICFKSKEDDERVRKLSWLGINKDTFARTAAQGAYKWMYDVEELGYKY
HGNSIMAAMGLVQLKYLDLDNAYRRQLASWYRENLAGQTKIDIVNVTPGCESSTHLLQIRVKDRDALMLALNEHQIYPGV
HYRDNTEYSMYSFGAGTCPNAAKASQEILSLPMHLGLTRADVDTVCELLIRYAK

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=376, Percent_Identity=34.8404255319149, Blast_Score=168, Evalue=6e-43,
Organism=Escherichia coli, GI2367285, Length=330, Percent_Identity=28.4848484848485, Blast_Score=95, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42014; Mature: 41882

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQLFVPKFRIDECLAAIRECLEKGWTGLGFKTATMEEEWKTYTGLPNAHFLSSNTVGL
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCCEEECCCCCEE
HLAVELYKTKFGWSDEDEVITTPLTFISTNHAILYAGMKPVFADVDASLCLDPESVIERI
EEEEEEEHHHCCCCCCCCEEECCEEEEECCCEEEEECCCCEEECCCCCEEECHHHHHHHC
TPKTKALIFVGIGGNIGQYQKIVEICKEHDIKLILDAAHMAGTRVNGKHVGQEADCVVFS
CCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEHHHCCCCCCCHHCCCCCCEEEEE
FQAVKNLPTADSGMICFKSKEDDERVRKLSWLGINKDTFARTAAQGAYKWMYDVEELGYK
EHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHEEEHHHCCEE
YHGNSIMAAMGLVQLKYLDLDNAYRRQLASWYRENLAGQTKIDIVNVTPGCESSTHLLQI
ECCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEE
RVKDRDALMLALNEHQIYPGVHYRDNTEYSMYSFGAGTCPNAAKASQEILSLPMHLGLTR
EEECCCEEEEEEECCEECCCCEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
ADVDTVCELLIRYAK
CCHHHHHHHHHHHCC
>Mature Secondary Structure 
SIQLFVPKFRIDECLAAIRECLEKGWTGLGFKTATMEEEWKTYTGLPNAHFLSSNTVGL
EEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCCEEECCCCCEE
HLAVELYKTKFGWSDEDEVITTPLTFISTNHAILYAGMKPVFADVDASLCLDPESVIERI
EEEEEEEHHHCCCCCCCCEEECCEEEEECCCEEEEECCCCEEECCCCCEEECHHHHHHHC
TPKTKALIFVGIGGNIGQYQKIVEICKEHDIKLILDAAHMAGTRVNGKHVGQEADCVVFS
CCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEHHHCCCCCCCHHCCCCCCEEEEE
FQAVKNLPTADSGMICFKSKEDDERVRKLSWLGINKDTFARTAAQGAYKWMYDVEELGYK
EHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHEEEHHHCCEE
YHGNSIMAAMGLVQLKYLDLDNAYRRQLASWYRENLAGQTKIDIVNVTPGCESSTHLLQI
ECCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEE
RVKDRDALMLALNEHQIYPGVHYRDNTEYSMYSFGAGTCPNAAKASQEILSLPMHLGLTR
EEECCCEEEEEEECCEECCCCEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
ADVDTVCELLIRYAK
CCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]