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The map label for this gene is spsC [H]

Identifier: 77460267

GI number: 77460267

Start: 4570517

End: 4571599

Strand: Reverse

Name: spsC [H]

Synonym: Pfl01_4046

Alternate gene names: 77460267

Gene position: 4571599-4570517 (Counterclockwise)

Preceding gene: 77460268

Following gene: 77460266

Centisome position: 71.01

GC content: 51.15

Gene sequence:

>1083_bases
ATGAATATTACTGTTACCAAGCCGTTTGTTCCTCCTTTCGACGAGTATGAAAAGTACCTGCGAGGGGTTTGGGGCCGTGA
ATGGTTCACCAACAATGGACCATTGGTTAACGAGCTTGAATTGAAGCTCAAGGAAAAGCTCGACGTCGATCATCTGCTGT
TTCTGAGTAACGGTACCATTGCCCTGCAAATTGCAATTCGAGCCTTGGAACTGAAAGGTGAAATCATCACCACGCCTTTC
AGCTATGTAGCCACGACGTCCAGCATCGTCTGGGAAAATTGCACGCCGATCATGGTGGATATCTGCCAGGACACGCTGAA
TATCGATCCGGCGAAAATCGAACAAGCGATCACTCCGCGAACCACGGCCATTCTGGCTACCCATGTGTTCGGCAATCCCT
GCGATGTCGAAGCGATCGATGCGGTGGCCAAAAAGCATGGCTTGAAAGTCATCTATGATGCCGCTCACGCCTTTGGTACG
ACCCATAAAGGGCGTTCCCTGCTGGCGTACGGCGATATTGCAACTTGCAGTTTTCATGCAACCAAGCTTTTTCACACCAT
CGAAGGTGGCGCGGTCGTTACTTCCGATCCTGAAATCCTGAAAAGCATGGCCATGAAGAGAAACTTCGGCCATACCTCGT
TGACTGATTTCGGTGGCGTCGGCGTCAATGGCAAGAACTCGGAAGTTCACGCTGCAATGGGACTGACGAATCTGAAGTAC
GTCGAAGAGATCCTGGAGAAGCGCAAGGAACTCTGCGACTACTACAAAGAGAACCTGACTGACCTGCCTGTCGAGTTCCA
GAAGATTGCAGCGGATACGCAATACAATCACTCCTACTTCCCGGTGATCTTCGAAAGTGAGAAAGTGCTTCTGGCTGTCA
TGGAAGTGCTCAACCTCCACAATATTTATCCTCGGCGCTATTTTTACCCGTCGCTTTCCGAGCTTCCGTACGTCGAGGGG
CAAAGTTCTCCGATCTCGGAGGATGTTTCCCGCCGCATCATTTGCCTGCCGCTCTACCACACCCTGTCGCGGGAAGAGAT
CGACATGATCTGCCGACTCATCAAGCGCTCTGTCAGGTATTGA

Upstream 100 bases:

>100_bases
AGGCCAGGGCTGAGCTGCAGGCCTATCAGGCGTCCTGGTGTGGACGCATCAAATCTTTCTTTAACAGAACTGCACAATAA
GTTTCGATTTCGGGGCGCGC

Downstream 100 bases:

>100_bases
GTGAATTTTCGGATCAGGAGATTTTGATGAAAAAGTATTACGGAATCATCGGTGCAGGAGGTTATGGCAGAGAGGTCATT
CCCCTGGCGCGTGCTTCTCT

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MNITVTKPFVPPFDEYEKYLRGVWGREWFTNNGPLVNELELKLKEKLDVDHLLFLSNGTIALQIAIRALELKGEIITTPF
SYVATTSSIVWENCTPIMVDICQDTLNIDPAKIEQAITPRTTAILATHVFGNPCDVEAIDAVAKKHGLKVIYDAAHAFGT
THKGRSLLAYGDIATCSFHATKLFHTIEGGAVVTSDPEILKSMAMKRNFGHTSLTDFGGVGVNGKNSEVHAAMGLTNLKY
VEEILEKRKELCDYYKENLTDLPVEFQKIAADTQYNHSYFPVIFESEKVLLAVMEVLNLHNIYPRRYFYPSLSELPYVEG
QSSPISEDVSRRIICLPLYHTLSREEIDMICRLIKRSVRY

Sequences:

>Translated_360_residues
MNITVTKPFVPPFDEYEKYLRGVWGREWFTNNGPLVNELELKLKEKLDVDHLLFLSNGTIALQIAIRALELKGEIITTPF
SYVATTSSIVWENCTPIMVDICQDTLNIDPAKIEQAITPRTTAILATHVFGNPCDVEAIDAVAKKHGLKVIYDAAHAFGT
THKGRSLLAYGDIATCSFHATKLFHTIEGGAVVTSDPEILKSMAMKRNFGHTSLTDFGGVGVNGKNSEVHAAMGLTNLKY
VEEILEKRKELCDYYKENLTDLPVEFQKIAADTQYNHSYFPVIFESEKVLLAVMEVLNLHNIYPRRYFYPSLSELPYVEG
QSSPISEDVSRRIICLPLYHTLSREEIDMICRLIKRSVRY
>Mature_360_residues
MNITVTKPFVPPFDEYEKYLRGVWGREWFTNNGPLVNELELKLKEKLDVDHLLFLSNGTIALQIAIRALELKGEIITTPF
SYVATTSSIVWENCTPIMVDICQDTLNIDPAKIEQAITPRTTAILATHVFGNPCDVEAIDAVAKKHGLKVIYDAAHAFGT
THKGRSLLAYGDIATCSFHATKLFHTIEGGAVVTSDPEILKSMAMKRNFGHTSLTDFGGVGVNGKNSEVHAAMGLTNLKY
VEEILEKRKELCDYYKENLTDLPVEFQKIAADTQYNHSYFPVIFESEKVLLAVMEVLNLHNIYPRRYFYPSLSELPYVEG
QSSPISEDVSRRIICLPLYHTLSREEIDMICRLIKRSVRY

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=350, Percent_Identity=30.8571428571429, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI2367285, Length=366, Percent_Identity=27.0491803278689, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 40641; Mature: 40641

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITVTKPFVPPFDEYEKYLRGVWGREWFTNNGPLVNELELKLKEKLDVDHLLFLSNGTI
CCEEECCCCCCCHHHHHHHHHHCCCCCEECCCCCEEHHHHHHHHHHCCCCEEEEEECCCE
ALQIAIRALELKGEIITTPFSYVATTSSIVWENCTPIMVDICQDTLNIDPAKIEQAITPR
EEEEEEEHHHHCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCC
TTAILATHVFGNPCDVEAIDAVAKKHGLKVIYDAAHAFGTTHKGRSLLAYGDIATCSFHA
HHHEEEEHHCCCCCCHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCEEEEECCEEEEHHHH
TKLFHTIEGGAVVTSDPEILKSMAMKRNFGHTSLTDFGGVGVNGKNSEVHAAMGLTNLKY
HHHHHEECCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHCCCHHHH
VEEILEKRKELCDYYKENLTDLPVEFQKIAADTQYNHSYFPVIFESEKVLLAVMEVLNLH
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
NIYPRRYFYPSLSELPYVEGQSSPISEDVSRRIICLPLYHTLSREEIDMICRLIKRSVRY
CCCCCCCCCCCHHHCCCCCCCCCCCHHHHHCCEEEEEHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNITVTKPFVPPFDEYEKYLRGVWGREWFTNNGPLVNELELKLKEKLDVDHLLFLSNGTI
CCEEECCCCCCCHHHHHHHHHHCCCCCEECCCCCEEHHHHHHHHHHCCCCEEEEEECCCE
ALQIAIRALELKGEIITTPFSYVATTSSIVWENCTPIMVDICQDTLNIDPAKIEQAITPR
EEEEEEEHHHHCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCC
TTAILATHVFGNPCDVEAIDAVAKKHGLKVIYDAAHAFGTTHKGRSLLAYGDIATCSFHA
HHHEEEEHHCCCCCCHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCEEEEECCEEEEHHHH
TKLFHTIEGGAVVTSDPEILKSMAMKRNFGHTSLTDFGGVGVNGKNSEVHAAMGLTNLKY
HHHHHEECCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHCCCHHHH
VEEILEKRKELCDYYKENLTDLPVEFQKIAADTQYNHSYFPVIFESEKVLLAVMEVLNLH
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
NIYPRRYFYPSLSELPYVEGQSSPISEDVSRRIICLPLYHTLSREEIDMICRLIKRSVRY
CCCCCCCCCCCHHHCCCCCCCCCCCHHHHHCCEEEEEHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]