| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is oprI [H]
Identifier: 77460232
GI number: 77460232
Start: 4536951
End: 4537202
Strand: Direct
Name: oprI [H]
Synonym: Pfl01_4011
Alternate gene names: 77460232
Gene position: 4536951-4537202 (Clockwise)
Preceding gene: 77460230
Following gene: 77460236
Centisome position: 70.47
GC content: 54.76
Gene sequence:
>252_bases ATGAACAACGTTCTGAAATTCTCTGCTCTGGCTCTGGCCGCAGTTCTGGCTACCGGTTGCAGCAGCGCATCGAAAGAAAC CGAAGCACGTCTGACCGCTACTGAAGACGCAGCTGCTCGCGCCCAGGCTCGTGCAGACGAAGCTTACCGTAAAGCTGATG AAGCTCTGGCTGCTGCTCAAAAAGCACAACAGACTGCTGACGAAGCTAACGAGCGTGCTCTGCGCATGCTGGAAAAAGCT AGCCGCAAGTAA
Upstream 100 bases:
>100_bases GTCAGTTTACTTACTACAAGTAATGGGTAGTATGTACGCCGGCTATTTCCTCAATCGGAGGAGACAGCCACTTAATTGAA AGTCCTTGAAGGGGAACACG
Downstream 100 bases:
>100_bases TAGTCCTTCGGGATTGTTATCAAGCCGACCCGTTTTTCGGGTCGGCTTTTTTGTGCCTGCAGTTTTCTGCGGGCAATAAA AAACCCGCCACGGCGCAAGC
Product: outer membrane lipoprotein OprI
Products: NA
Alternate protein names: Outer membrane lipoprotein I [H]
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MNNVLKFSALALAAVLATGCSSASKETEARLTATEDAAARAQARADEAYRKADEALAAAQKAQQTADEANERALRMLEKA SRK
Sequences:
>Translated_83_residues MNNVLKFSALALAAVLATGCSSASKETEARLTATEDAAARAQARADEAYRKADEALAAAQKAQQTADEANERALRMLEKA SRK >Mature_83_residues MNNVLKFSALALAAVLATGCSSASKETEARLTATEDAAARAQARADEAYRKADEALAAAQKAQQTADEANERALRMLEKA SRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021793 [H]
Pfam domain/function: PF11839 DUF3359 [H]
EC number: NA
Molecular weight: Translated: 8783; Mature: 8783
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNVLKFSALALAAVLATGCSSASKETEARLTATEDAAARAQARADEAYRKADEALAAAQ CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAQQTADEANERALRMLEKASRK HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNNVLKFSALALAAVLATGCSSASKETEARLTATEDAAARAQARADEAYRKADEALAAAQ CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAQQTADEANERALRMLEKASRK HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2473376; 2502533; 1588307; 10984043 [H]