Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is oprI [H]

Identifier: 77460232

GI number: 77460232

Start: 4536951

End: 4537202

Strand: Direct

Name: oprI [H]

Synonym: Pfl01_4011

Alternate gene names: 77460232

Gene position: 4536951-4537202 (Clockwise)

Preceding gene: 77460230

Following gene: 77460236

Centisome position: 70.47

GC content: 54.76

Gene sequence:

>252_bases
ATGAACAACGTTCTGAAATTCTCTGCTCTGGCTCTGGCCGCAGTTCTGGCTACCGGTTGCAGCAGCGCATCGAAAGAAAC
CGAAGCACGTCTGACCGCTACTGAAGACGCAGCTGCTCGCGCCCAGGCTCGTGCAGACGAAGCTTACCGTAAAGCTGATG
AAGCTCTGGCTGCTGCTCAAAAAGCACAACAGACTGCTGACGAAGCTAACGAGCGTGCTCTGCGCATGCTGGAAAAAGCT
AGCCGCAAGTAA

Upstream 100 bases:

>100_bases
GTCAGTTTACTTACTACAAGTAATGGGTAGTATGTACGCCGGCTATTTCCTCAATCGGAGGAGACAGCCACTTAATTGAA
AGTCCTTGAAGGGGAACACG

Downstream 100 bases:

>100_bases
TAGTCCTTCGGGATTGTTATCAAGCCGACCCGTTTTTCGGGTCGGCTTTTTTGTGCCTGCAGTTTTCTGCGGGCAATAAA
AAACCCGCCACGGCGCAAGC

Product: outer membrane lipoprotein OprI

Products: NA

Alternate protein names: Outer membrane lipoprotein I [H]

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MNNVLKFSALALAAVLATGCSSASKETEARLTATEDAAARAQARADEAYRKADEALAAAQKAQQTADEANERALRMLEKA
SRK

Sequences:

>Translated_83_residues
MNNVLKFSALALAAVLATGCSSASKETEARLTATEDAAARAQARADEAYRKADEALAAAQKAQQTADEANERALRMLEKA
SRK
>Mature_83_residues
MNNVLKFSALALAAVLATGCSSASKETEARLTATEDAAARAQARADEAYRKADEALAAAQKAQQTADEANERALRMLEKA
SRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021793 [H]

Pfam domain/function: PF11839 DUF3359 [H]

EC number: NA

Molecular weight: Translated: 8783; Mature: 8783

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNVLKFSALALAAVLATGCSSASKETEARLTATEDAAARAQARADEAYRKADEALAAAQ
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAQQTADEANERALRMLEKASRK
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNVLKFSALALAAVLATGCSSASKETEARLTATEDAAARAQARADEAYRKADEALAAAQ
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAQQTADEANERALRMLEKASRK
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2473376; 2502533; 1588307; 10984043 [H]