Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77460229

Identifier: 77460229

GI number: 77460229

Start: 4534313

End: 4534756

Strand: Direct

Name: 77460229

Synonym: Pfl01_4008

Alternate gene names: NA

Gene position: 4534313-4534756 (Clockwise)

Preceding gene: 77460223

Following gene: 77460230

Centisome position: 70.43

GC content: 59.68

Gene sequence:

>444_bases
ATGGGACGGTTTATTCCTCATCCGGATGATGTGCCCGTTGAATTGACCTTGCTCACACCGGAGTGTATTTCGCGTCAACG
GCTGCACACTATCAGCCTCGGCGGCATCGCTTGCAATTACCACCGTGCCTGGCGCCATGGCACCGCGCTGCAGGTGCGCA
TGCCGACTCTCAATGCCGACATCTGTTATCCGGGCTACGTGGCCTGGTGCCTGCGTCGCAAGAAAGGCTATCTGGTGGGC
ATCGCCTTCACCGACGAACAGACGCTGTTCAGCGCGCGAATGGGTGAGCAGGTGTGTCAGATCGAACGCTATTGCCGACT
CAACGACGCCCACGACGACCTCCAGGATATTCAGGCCCTGGCCCTGCAATGGGTCGAACAACACGCCGACGAGTTCTCCC
ACGACACCGTTCGCAAGGCGTTTGCGCAGCCTGTGCTGGACTGA

Upstream 100 bases:

>100_bases
CGCCAGCAGCCGTTGGTCGGCGTCAAAATCGGTCAGTTGCGATTCGACCACTATACTGGGGGAAACAATGTCAAATGGCC
GACACAGGGAGTCTGTGCTC

Downstream 100 bases:

>100_bases
ACAGTGACTTGCCCATTGTCTAGCAGGCGTCTAACGCGATAAGGTTCGGCTCCCCGACGCGCTTAAATCCGCTGTGCTCC
GCCGCGCGGGGATCGCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Type IV Pilus Assembly Protein PilZ; NB-Like; NB-Like Protein

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MGRFIPHPDDVPVELTLLTPECISRQRLHTISLGGIACNYHRAWRHGTALQVRMPTLNADICYPGYVAWCLRRKKGYLVG
IAFTDEQTLFSARMGEQVCQIERYCRLNDAHDDLQDIQALALQWVEQHADEFSHDTVRKAFAQPVLD

Sequences:

>Translated_147_residues
MGRFIPHPDDVPVELTLLTPECISRQRLHTISLGGIACNYHRAWRHGTALQVRMPTLNADICYPGYVAWCLRRKKGYLVG
IAFTDEQTLFSARMGEQVCQIERYCRLNDAHDDLQDIQALALQWVEQHADEFSHDTVRKAFAQPVLD
>Mature_146_residues
GRFIPHPDDVPVELTLLTPECISRQRLHTISLGGIACNYHRAWRHGTALQVRMPTLNADICYPGYVAWCLRRKKGYLVGI
AFTDEQTLFSARMGEQVCQIERYCRLNDAHDDLQDIQALALQWVEQHADEFSHDTVRKAFAQPVLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16865; Mature: 16734

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRFIPHPDDVPVELTLLTPECISRQRLHTISLGGIACNYHRAWRHGTALQVRMPTLNAD
CCCCCCCCCCCCEEEEEECHHHHCHHHHEEEEECCEEECCHHHHCCCCEEEEECCCCCCC
ICYPGYVAWCLRRKKGYLVGIAFTDEQTLFSARMGEQVCQIERYCRLNDAHDDLQDIQAL
CCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ALQWVEQHADEFSHDTVRKAFAQPVLD
HHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
GRFIPHPDDVPVELTLLTPECISRQRLHTISLGGIACNYHRAWRHGTALQVRMPTLNAD
CCCCCCCCCCCEEEEEECHHHHCHHHHEEEEECCEEECCHHHHCCCCEEEEECCCCCCC
ICYPGYVAWCLRRKKGYLVGIAFTDEQTLFSARMGEQVCQIERYCRLNDAHDDLQDIQAL
CCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ALQWVEQHADEFSHDTVRKAFAQPVLD
HHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA