| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77460229
Identifier: 77460229
GI number: 77460229
Start: 4534313
End: 4534756
Strand: Direct
Name: 77460229
Synonym: Pfl01_4008
Alternate gene names: NA
Gene position: 4534313-4534756 (Clockwise)
Preceding gene: 77460223
Following gene: 77460230
Centisome position: 70.43
GC content: 59.68
Gene sequence:
>444_bases ATGGGACGGTTTATTCCTCATCCGGATGATGTGCCCGTTGAATTGACCTTGCTCACACCGGAGTGTATTTCGCGTCAACG GCTGCACACTATCAGCCTCGGCGGCATCGCTTGCAATTACCACCGTGCCTGGCGCCATGGCACCGCGCTGCAGGTGCGCA TGCCGACTCTCAATGCCGACATCTGTTATCCGGGCTACGTGGCCTGGTGCCTGCGTCGCAAGAAAGGCTATCTGGTGGGC ATCGCCTTCACCGACGAACAGACGCTGTTCAGCGCGCGAATGGGTGAGCAGGTGTGTCAGATCGAACGCTATTGCCGACT CAACGACGCCCACGACGACCTCCAGGATATTCAGGCCCTGGCCCTGCAATGGGTCGAACAACACGCCGACGAGTTCTCCC ACGACACCGTTCGCAAGGCGTTTGCGCAGCCTGTGCTGGACTGA
Upstream 100 bases:
>100_bases CGCCAGCAGCCGTTGGTCGGCGTCAAAATCGGTCAGTTGCGATTCGACCACTATACTGGGGGAAACAATGTCAAATGGCC GACACAGGGAGTCTGTGCTC
Downstream 100 bases:
>100_bases ACAGTGACTTGCCCATTGTCTAGCAGGCGTCTAACGCGATAAGGTTCGGCTCCCCGACGCGCTTAAATCCGCTGTGCTCC GCCGCGCGGGGATCGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilZ; NB-Like; NB-Like Protein
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MGRFIPHPDDVPVELTLLTPECISRQRLHTISLGGIACNYHRAWRHGTALQVRMPTLNADICYPGYVAWCLRRKKGYLVG IAFTDEQTLFSARMGEQVCQIERYCRLNDAHDDLQDIQALALQWVEQHADEFSHDTVRKAFAQPVLD
Sequences:
>Translated_147_residues MGRFIPHPDDVPVELTLLTPECISRQRLHTISLGGIACNYHRAWRHGTALQVRMPTLNADICYPGYVAWCLRRKKGYLVG IAFTDEQTLFSARMGEQVCQIERYCRLNDAHDDLQDIQALALQWVEQHADEFSHDTVRKAFAQPVLD >Mature_146_residues GRFIPHPDDVPVELTLLTPECISRQRLHTISLGGIACNYHRAWRHGTALQVRMPTLNADICYPGYVAWCLRRKKGYLVGI AFTDEQTLFSARMGEQVCQIERYCRLNDAHDDLQDIQALALQWVEQHADEFSHDTVRKAFAQPVLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16865; Mature: 16734
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRFIPHPDDVPVELTLLTPECISRQRLHTISLGGIACNYHRAWRHGTALQVRMPTLNAD CCCCCCCCCCCCEEEEEECHHHHCHHHHEEEEECCEEECCHHHHCCCCEEEEECCCCCCC ICYPGYVAWCLRRKKGYLVGIAFTDEQTLFSARMGEQVCQIERYCRLNDAHDDLQDIQAL CCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ALQWVEQHADEFSHDTVRKAFAQPVLD HHHHHHHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure GRFIPHPDDVPVELTLLTPECISRQRLHTISLGGIACNYHRAWRHGTALQVRMPTLNAD CCCCCCCCCCCEEEEEECHHHHCHHHHEEEEECCEEECCHHHHCCCCEEEEECCCCCCC ICYPGYVAWCLRRKKGYLVGIAFTDEQTLFSARMGEQVCQIERYCRLNDAHDDLQDIQAL CCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ALQWVEQHADEFSHDTVRKAFAQPVLD HHHHHHHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA