| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460228
Identifier: 77460228
GI number: 77460228
Start: 4533928
End: 4534314
Strand: Reverse
Name: 77460228
Synonym: Pfl01_4007
Alternate gene names: NA
Gene position: 4534314-4533928 (Counterclockwise)
Preceding gene: 77460231
Following gene: 77460227
Centisome position: 70.43
GC content: 58.14
Gene sequence:
>387_bases ATGAGCACAGACTCCCTGTGTCGGCCATTTGACATTGTTTCCCCCAGTATAGTGGTCGAATCGCAACTGACCGATTTTGA CGCCGACCAACGGCTGCTGGCGATGAATGGCGTTTCGCTGGTGATCTTCACCAGCGTCGGCTGCGCCAGTTGCCGCTATG CCCGCGAAGTGTTGCCGGGACTTGATCTTGCCGTCGATCGCGTGTGCTGGATCGATGCCGGTGACAACGGCGGACTGGTC GAGCGTTATCAGGTCTTTCATTTGCCGGCGCTGTTTGTGGTGCGTGACGGCGAGTTCTTTGGGGCTGTGCACACGCGTCT GAATGTCGATGAGCTGAATGCAGCCGTGACGCAGGCGCTAGGTCGAATTGCAGAGGAGTTGCCGTGA
Upstream 100 bases:
>100_bases GCCGAGGCTGATAGTGTGCAGCCGTTGACGCGAAATACACTCCGGTGTGAGCAAGGTCAATTCAACGGGCACATCATCCG GATGAGGAATAAACCGTCCC
Downstream 100 bases:
>100_bases TGGGAGCAGTGAAAAAACCGGTGGTGGGGATTATCGGCACCGGCGCCATCGGAGGGTTCTACGGGGTGATGCTGGCCCGG GCCGGGTTCGATGTGCACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSTDSLCRPFDIVSPSIVVESQLTDFDADQRLLAMNGVSLVIFTSVGCASCRYAREVLPGLDLAVDRVCWIDAGDNGGLV ERYQVFHLPALFVVRDGEFFGAVHTRLNVDELNAAVTQALGRIAEELP
Sequences:
>Translated_128_residues MSTDSLCRPFDIVSPSIVVESQLTDFDADQRLLAMNGVSLVIFTSVGCASCRYAREVLPGLDLAVDRVCWIDAGDNGGLV ERYQVFHLPALFVVRDGEFFGAVHTRLNVDELNAAVTQALGRIAEELP >Mature_127_residues STDSLCRPFDIVSPSIVVESQLTDFDADQRLLAMNGVSLVIFTSVGCASCRYAREVLPGLDLAVDRVCWIDAGDNGGLVE RYQVFHLPALFVVRDGEFFGAVHTRLNVDELNAAVTQALGRIAEELP
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13958; Mature: 13827
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDSLCRPFDIVSPSIVVESQLTDFDADQRLLAMNGVSLVIFTSVGCASCRYAREVLPG CCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHCCC LDLAVDRVCWIDAGDNGGLVERYQVFHLPALFVVRDGEFFGAVHTRLNVDELNAAVTQAL CCCEECEEEEEEECCCCCHHHHHHHEECCEEEEEECCCEEEHHHEECCHHHHHHHHHHHH GRIAEELP HHHHHHCC >Mature Secondary Structure STDSLCRPFDIVSPSIVVESQLTDFDADQRLLAMNGVSLVIFTSVGCASCRYAREVLPG CCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHHHCCC LDLAVDRVCWIDAGDNGGLVERYQVFHLPALFVVRDGEFFGAVHTRLNVDELNAAVTQAL CCCEECEEEEEEECCCCCHHHHHHHEECCEEEEEECCCEEEHHHEECCHHHHHHHHHHHH GRIAEELP HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA