| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is aroH [H]
Identifier: 77460211
GI number: 77460211
Start: 4519592
End: 4520938
Strand: Direct
Name: aroH [H]
Synonym: Pfl01_3990
Alternate gene names: 77460211
Gene position: 4519592-4520938 (Clockwise)
Preceding gene: 77460209
Following gene: 77460214
Centisome position: 70.2
GC content: 63.1
Gene sequence:
>1347_bases ATGAGCCAACCCTGGAGCCCTGACAGCTGGCGCGCCCTGCCGATCCAGCAACAACCCCAATACCCCGACGCCGCGCATCT GCGCCAGGTCGAGCAGACGCTGGCCAGCTATCCGCCGCTGGTATTTGCCGGCGAAGCGCGCGAGCTGCGTCGTCAGTTTG CCGAAGTCACCCAGGGCCGGGCGTTCCTGCTGCAGGGCGGCGATTGCGCGGAAAGCTTCGCCGAGTTCTCCGCCGCGAAG ATTCGCGACACTTTTAAAGTATTGCTGCAAATGGCGATCGTCATGACCTTCGCCGCCGGCTGCCCGGTGGTGAAAGTCGG GCGCATGGCCGGTCAGTTCGCCAAGCCCCGCTCGGCCAACGACGAGACCATCGACGGCGTGACCCTGCCGGCCTACCGGG GCGACATCGTCAACGGCATCGGTTTCGACTCGGCCAGCCGCGTACCGGATCCGGAGCGTCTGCTGCAGTCCTATCACCAG TCCACCGCCACCCTCAACCTGTTGCGCGCTTTCGCCCAGGGCGGTTTTGCCGACCTGCATCAGGTGCACAAGTGGAACCT CGATTTCATCGCCAACTCGGCGCTGGCGGAGAAGTACAGCCACCTCGCCGACCGCATCGATGAAACCCTGGCCTTTATGC GCGCCTGCGGCATGGACAGCTCGCCGCAACTGCGCGAGACCAGTTTCTTCACCGCCCACGAAGCGCTGCTGCTGAACTAC GAAGAAGCCTTCGTGCGCCGCGACAGCCTGACCAACGATTACTACGATTGCTCGGCGCACATGCTGTGGATCGGCGACCG CACCCGTCAGCTCGACGGCGCCCACGTCGAATTCCTGCGCGGGGTGAACAATCCGATCGGTGTCAAAGTCGGCCCGAGCA TGAACCCCGACGATCTGATCCGCCTGATCGACGTGCTCAACCCGGACAACGATCCGGGCCGCCTCAACCTGATCGCGCGA ATGGGCGCGAACAAGGTCGGCGTTCACCTGCCGGCGCTGATCCGTGCGGTGCAACGTGAAGGCAAGCAGGTGCTGTGGAG TTCCGACCCGATGCATGGCAACACCATCAAGGCCAGCAGCGGCTACAAGACTCGCGACTTCGCGCAGATCCTTGGCGAGG TGAAGCAGTTCTTCCAGGTTCACGAGGCTGAAGGCAGCTACGCTGGCGGCATCCACATCGAGATGACCGGGCAGAACGTC ACCGAGTGCATCGGTGGCGCGCGGCCGATCACTGAAGATGGCTTGTCGGATCGCTATCACACTCACTGCGACCCACGGAT GAATGCCGATCAGTCGCTGGAACTGGCGTTCTTGATTGCCGAGACGTTGAAACAGGTCAAACGCTGA
Upstream 100 bases:
>100_bases TGCCGTGGCAAAGCGGCGATTGTCGGCGAAGCGGCGGGAGCAGGTCACGCACTAATTGCTGCTAACATGGCCGTCCGTGC GTAGAACCTTAGAGACCGTG
Downstream 100 bases:
>100_bases ATTGCGATGGCGCGGGCTCAGTCAATTTGAGCCAGCGCCATCCGCAACCTCCCTGCACTTTCCCGCTGACAATTGAGCTG CACCTGCTCAAGCCCCAACC
Product: 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSQPWSPDSWRALPIQQQPQYPDAAHLRQVEQTLASYPPLVFAGEARELRRQFAEVTQGRAFLLQGGDCAESFAEFSAAK IRDTFKVLLQMAIVMTFAAGCPVVKVGRMAGQFAKPRSANDETIDGVTLPAYRGDIVNGIGFDSASRVPDPERLLQSYHQ STATLNLLRAFAQGGFADLHQVHKWNLDFIANSALAEKYSHLADRIDETLAFMRACGMDSSPQLRETSFFTAHEALLLNY EEAFVRRDSLTNDYYDCSAHMLWIGDRTRQLDGAHVEFLRGVNNPIGVKVGPSMNPDDLIRLIDVLNPDNDPGRLNLIAR MGANKVGVHLPALIRAVQREGKQVLWSSDPMHGNTIKASSGYKTRDFAQILGEVKQFFQVHEAEGSYAGGIHIEMTGQNV TECIGGARPITEDGLSDRYHTHCDPRMNADQSLELAFLIAETLKQVKR
Sequences:
>Translated_448_residues MSQPWSPDSWRALPIQQQPQYPDAAHLRQVEQTLASYPPLVFAGEARELRRQFAEVTQGRAFLLQGGDCAESFAEFSAAK IRDTFKVLLQMAIVMTFAAGCPVVKVGRMAGQFAKPRSANDETIDGVTLPAYRGDIVNGIGFDSASRVPDPERLLQSYHQ STATLNLLRAFAQGGFADLHQVHKWNLDFIANSALAEKYSHLADRIDETLAFMRACGMDSSPQLRETSFFTAHEALLLNY EEAFVRRDSLTNDYYDCSAHMLWIGDRTRQLDGAHVEFLRGVNNPIGVKVGPSMNPDDLIRLIDVLNPDNDPGRLNLIAR MGANKVGVHLPALIRAVQREGKQVLWSSDPMHGNTIKASSGYKTRDFAQILGEVKQFFQVHEAEGSYAGGIHIEMTGQNV TECIGGARPITEDGLSDRYHTHCDPRMNADQSLELAFLIAETLKQVKR >Mature_447_residues SQPWSPDSWRALPIQQQPQYPDAAHLRQVEQTLASYPPLVFAGEARELRRQFAEVTQGRAFLLQGGDCAESFAEFSAAKI RDTFKVLLQMAIVMTFAAGCPVVKVGRMAGQFAKPRSANDETIDGVTLPAYRGDIVNGIGFDSASRVPDPERLLQSYHQS TATLNLLRAFAQGGFADLHQVHKWNLDFIANSALAEKYSHLADRIDETLAFMRACGMDSSPQLRETSFFTAHEALLLNYE EAFVRRDSLTNDYYDCSAHMLWIGDRTRQLDGAHVEFLRGVNNPIGVKVGPSMNPDDLIRLIDVLNPDNDPGRLNLIARM GANKVGVHLPALIRAVQREGKQVLWSSDPMHGNTIKASSGYKTRDFAQILGEVKQFFQVHEAEGSYAGGIHIEMTGQNVT ECIGGARPITEDGLSDRYHTHCDPRMNADQSLELAFLIAETLKQVKR
Specific function: Unknown
COG id: COG3200
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II DAHP synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002480 [H]
Pfam domain/function: PF01474 DAHP_synth_2 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 49760; Mature: 49629
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPWSPDSWRALPIQQQPQYPDAAHLRQVEQTLASYPPLVFAGEARELRRQFAEVTQGR CCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCC AFLLQGGDCAESFAEFSAAKIRDTFKVLLQMAIVMTFAAGCPVVKVGRMAGQFAKPRSAN EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC DETIDGVTLPAYRGDIVNGIGFDSASRVPDPERLLQSYHQSTATLNLLRAFAQGGFADLH CCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH QVHKWNLDFIANSALAEKYSHLADRIDETLAFMRACGMDSSPQLRETSFFTAHEALLLNY HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCH EEAFVRRDSLTNDYYDCSAHMLWIGDRTRQLDGAHVEFLRGVNNPIGVKVGPSMNPDDLI HHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCEEECCCCCHHHHH RLIDVLNPDNDPGRLNLIARMGANKVGVHLPALIRAVQREGKQVLWSSDPMHGNTIKASS HHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEECCC GYKTRDFAQILGEVKQFFQVHEAEGSYAGGIHIEMTGQNVTECIGGARPITEDGLSDRYH CCCHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEECCCHHHHHHCCCCCCCCCCCCCCCC THCDPRMNADQSLELAFLIAETLKQVKR CCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SQPWSPDSWRALPIQQQPQYPDAAHLRQVEQTLASYPPLVFAGEARELRRQFAEVTQGR CCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCC AFLLQGGDCAESFAEFSAAKIRDTFKVLLQMAIVMTFAAGCPVVKVGRMAGQFAKPRSAN EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC DETIDGVTLPAYRGDIVNGIGFDSASRVPDPERLLQSYHQSTATLNLLRAFAQGGFADLH CCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH QVHKWNLDFIANSALAEKYSHLADRIDETLAFMRACGMDSSPQLRETSFFTAHEALLLNY HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCH EEAFVRRDSLTNDYYDCSAHMLWIGDRTRQLDGAHVEFLRGVNNPIGVKVGPSMNPDDLI HHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCEEECCCCCHHHHH RLIDVLNPDNDPGRLNLIARMGANKVGVHLPALIRAVQREGKQVLWSSDPMHGNTIKASS HHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEECCC GYKTRDFAQILGEVKQFFQVHEAEGSYAGGIHIEMTGQNVTECIGGARPITEDGLSDRYH CCCHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEECCCHHHHHHCCCCCCCCCCCCCCCC THCDPRMNADQSLELAFLIAETLKQVKR CCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953; 8760910 [H]