| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is caiD [C]
Identifier: 77460209
GI number: 77460209
Start: 4517891
End: 4518682
Strand: Direct
Name: caiD [C]
Synonym: Pfl01_3988
Alternate gene names: 77460209
Gene position: 4517891-4518682 (Clockwise)
Preceding gene: 77460207
Following gene: 77460211
Centisome position: 70.17
GC content: 63.89
Gene sequence:
>792_bases ATGAATCAGCCCTGCCCCGGCCGCGTGAGCCGTGCGCGCCACGGTCATGTGCATTTGATCGGTCTGGACCGCGCTGCCAA GCGCAACGCCTTCGACCTAGACCTGCTCAACGACCTGGCCCTGGCCTATGGCGAATTCGAGGCCGACAGTAACGCACGGG TGGCGGTGGTGTTCGGGCACGGCGAGCATTTCACCGCGGGGCTCGATCTGGTCAACGCCAGTTCTGCCCTCGCCCAAGGC TGGCAGGTGCCGCCCGGCGGTTGCGATCCGTGGGGCGTTTTCGTCGGACCACGGGTCAGCAAACCGGTGATCGTCGCTGC GCAGGGTTACTGCCTGACCATCGGCATCGAGTTGATGCTCGCCGCCGACATCAACCTGTGTGCCAGCAACACCCGCTTCG CCCAGATGGAAGTGCAGCGTGGAATCTTTCCGTTTGGTGGTGCGACGTTGCGTTTCCATCAGATTGCCGGCTGGGGCAAT GCCATGCGCTGGTTGCTGACCGGTGATGAATTCGATGCCCATGATGCGTTACGTCTGGGTCTGGTGCAGGAAGTCATGGC CAGCGAGGATCTGCTGCCGCGCGCCATCGAACTGGCCGAACGCATCGCCCGGCAGGCGCCGTTGGGCGTGCAGGCAACGC TGATGTCGGCGCGTCAGGCGCGCTATGAAGGTGAGACTGCGGCGGCTAAAAGCTTGCCGCCGCTGGTGAAGAAGTTGCTG GCCACCGAAGATGCCAAGGAAGGCGTGCGCTCGCTGGTGGAGCGCACGCCCGGCGTTTTCAAAGGCCTTTGA
Upstream 100 bases:
>100_bases TTTTCAAAGGGCCCGGCCCTGCGGGCGATGGCGCTTAAACGATTCACCGACGTGCGGCATCTGGTCGCTGCACCCTTTCT TCCCCTGCGAGGAAACACCC
Downstream 100 bases:
>100_bases AGATCAGGTCGCCGGACGTATGCAGTTGATCAACGTCTGCAACGAGTAGCCCAGCTTAGGCGCCAGCGCTTCAGCCCGGG CGGTCAGCGCCTGCATGTCC
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MNQPCPGRVSRARHGHVHLIGLDRAAKRNAFDLDLLNDLALAYGEFEADSNARVAVVFGHGEHFTAGLDLVNASSALAQG WQVPPGGCDPWGVFVGPRVSKPVIVAAQGYCLTIGIELMLAADINLCASNTRFAQMEVQRGIFPFGGATLRFHQIAGWGN AMRWLLTGDEFDAHDALRLGLVQEVMASEDLLPRAIELAERIARQAPLGVQATLMSARQARYEGETAAAKSLPPLVKKLL ATEDAKEGVRSLVERTPGVFKGL
Sequences:
>Translated_263_residues MNQPCPGRVSRARHGHVHLIGLDRAAKRNAFDLDLLNDLALAYGEFEADSNARVAVVFGHGEHFTAGLDLVNASSALAQG WQVPPGGCDPWGVFVGPRVSKPVIVAAQGYCLTIGIELMLAADINLCASNTRFAQMEVQRGIFPFGGATLRFHQIAGWGN AMRWLLTGDEFDAHDALRLGLVQEVMASEDLLPRAIELAERIARQAPLGVQATLMSARQARYEGETAAAKSLPPLVKKLL ATEDAKEGVRSLVERTPGVFKGL >Mature_263_residues MNQPCPGRVSRARHGHVHLIGLDRAAKRNAFDLDLLNDLALAYGEFEADSNARVAVVFGHGEHFTAGLDLVNASSALAQG WQVPPGGCDPWGVFVGPRVSKPVIVAAQGYCLTIGIELMLAADINLCASNTRFAQMEVQRGIFPFGGATLRFHQIAGWGN AMRWLLTGDEFDAHDALRLGLVQEVMASEDLLPRAIELAERIARQAPLGVQATLMSARQARYEGETAAAKSLPPLVKKLL ATEDAKEGVRSLVERTPGVFKGL
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=252, Percent_Identity=32.1428571428571, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI70995211, Length=264, Percent_Identity=28.4090909090909, Blast_Score=86, Evalue=4e-17, Organism=Escherichia coli, GI221142681, Length=259, Percent_Identity=33.976833976834, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1787659, Length=254, Percent_Identity=32.6771653543307, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1788682, Length=101, Percent_Identity=39.6039603960396, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1787660, Length=260, Percent_Identity=26.1538461538462, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17560910, Length=239, Percent_Identity=30.1255230125523, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI25145438, Length=250, Percent_Identity=29.6, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17554946, Length=241, Percent_Identity=30.2904564315353, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17536985, Length=221, Percent_Identity=28.5067873303167, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17540714, Length=196, Percent_Identity=24.4897959183673, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI20129971, Length=249, Percent_Identity=29.718875502008, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24653477, Length=249, Percent_Identity=29.718875502008, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24650670, Length=224, Percent_Identity=30.8035714285714, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI21357171, Length=207, Percent_Identity=28.5024154589372, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24653139, Length=262, Percent_Identity=26.7175572519084, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI19920382, Length=210, Percent_Identity=29.5238095238095, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 28317; Mature: 28317
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQPCPGRVSRARHGHVHLIGLDRAAKRNAFDLDLLNDLALAYGEFEADSNARVAVVFGH CCCCCCCCHHHCCCCEEEEEECCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEC GEHFTAGLDLVNASSALAQGWQVPPGGCDPWGVFVGPRVSKPVIVAAQGYCLTIGIELML CCEEECCHHHHCHHHHHHCCCCCCCCCCCCCCEEECCCCCCCEEEEECCEEEEEEEEEEE AADINLCASNTRFAQMEVQRGIFPFGGATLRFHQIAGWGNAMRWLLTGDEFDAHDALRLG EECCCEECCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHH LVQEVMASEDLLPRAIELAERIARQAPLGVQATLMSARQARYEGETAAAKSLPPLVKKLL HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHH ATEDAKEGVRSLVERTPGVFKGL HCCCHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MNQPCPGRVSRARHGHVHLIGLDRAAKRNAFDLDLLNDLALAYGEFEADSNARVAVVFGH CCCCCCCCHHHCCCCEEEEEECCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEC GEHFTAGLDLVNASSALAQGWQVPPGGCDPWGVFVGPRVSKPVIVAAQGYCLTIGIELML CCEEECCHHHHCHHHHHHCCCCCCCCCCCCCCEEECCCCCCCEEEEECCEEEEEEEEEEE AADINLCASNTRFAQMEVQRGIFPFGGATLRFHQIAGWGNAMRWLLTGDEFDAHDALRLG EECCCEECCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHH LVQEVMASEDLLPRAIELAERIARQAPLGVQATLMSARQARYEGETAAAKSLPPLVKKLL HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHH ATEDAKEGVRSLVERTPGVFKGL HCCCHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA