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The map label for this gene is speE [H]

Identifier: 77460210

GI number: 77460210

Start: 4518686

End: 4519441

Strand: Reverse

Name: speE [H]

Synonym: Pfl01_3989

Alternate gene names: 77460210

Gene position: 4519441-4518686 (Counterclockwise)

Preceding gene: 77460212

Following gene: 77460208

Centisome position: 70.2

GC content: 63.1

Gene sequence:

>756_bases
ATGACTGAGGAGCGCGTCGAGCTGTTGCTCGCCGAGGTACAGGATGAGTTCGGCGTGATTCGCGTGCTGGAAGTGGCCGA
CTACCGCTTTCTGGAGTTCGGCGATGCGATCGAGCAAAGCTGTGTGTTCACCGCCGACCCGAGCTGGCTGGAGTATGACT
ACACCCGGGCGATGCTGATCGGCGCGTTGTGCCACGAGCAACCGGAGAGCGCGCTGTTTCTCGGGCTGGGCGCGGGGACG
CTGACCCAGGCCTGCCTCAAGTTCCTGCCGCTGGAAGATGTCGAAGCCATCGAGCTGCGCCCTGACGTACCGCGTCTGGC
CATCGAATACCTCGGGCTGGATGACGATCCGCGGCTGTACATTCGCGTCGGTGATGCTCTCGAACTGCTGCCGACGGCAG
AACCGGCGGATCTGATCTTCGTCGACCTGTACACCGATGTCGGCCCCGGCGCCGGGCACCTTGCGTGGAATTTCCTCGGT
GACTGTCAGAAACGTCTGAATCCCGGTGGCTGGCTGGTGATCAACCAATGGGCCACCGATGATGGCAAACCCTTGGGCGC
GGCGCTGCTGCGCGGGCTCTATCACCGGCATTACTGGGAGCTGCCGGTGAAGGAGGGCAACGTGATTCTGATCGTGCCGG
CGGATCTCGATCAGGTGCTGGACATGCAGGCGCTGACCGCCCGGGCTGAAGCGCTGGCGCCTAAGCTGGGCTACTCGTTG
CAGACGTTGATCAACTGCATACGTCCGGCGACCTGA

Upstream 100 bases:

>100_bases
GCGTGACCTGCTCCCGCCGCTTCGCCGACAATCGCCGCTTTGCCACGGCACCACAGCGGTGCCATCGCGTCACCGCGCCC
GGTGACCACCAGGAGACGAA

Downstream 100 bases:

>100_bases
TCTTCAAAGGCCTTTGAAAACGCCGGGCGTGCGCTCCACCAGCGAGCGCACGCCTTCCTTGGCATCTTCGGTGGCCAGCA
ACTTCTTCACCAGCGGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MTEERVELLLAEVQDEFGVIRVLEVADYRFLEFGDAIEQSCVFTADPSWLEYDYTRAMLIGALCHEQPESALFLGLGAGT
LTQACLKFLPLEDVEAIELRPDVPRLAIEYLGLDDDPRLYIRVGDALELLPTAEPADLIFVDLYTDVGPGAGHLAWNFLG
DCQKRLNPGGWLVINQWATDDGKPLGAALLRGLYHRHYWELPVKEGNVILIVPADLDQVLDMQALTARAEALAPKLGYSL
QTLINCIRPAT

Sequences:

>Translated_251_residues
MTEERVELLLAEVQDEFGVIRVLEVADYRFLEFGDAIEQSCVFTADPSWLEYDYTRAMLIGALCHEQPESALFLGLGAGT
LTQACLKFLPLEDVEAIELRPDVPRLAIEYLGLDDDPRLYIRVGDALELLPTAEPADLIFVDLYTDVGPGAGHLAWNFLG
DCQKRLNPGGWLVINQWATDDGKPLGAALLRGLYHRHYWELPVKEGNVILIVPADLDQVLDMQALTARAEALAPKLGYSL
QTLINCIRPAT
>Mature_250_residues
TEERVELLLAEVQDEFGVIRVLEVADYRFLEFGDAIEQSCVFTADPSWLEYDYTRAMLIGALCHEQPESALFLGLGAGTL
TQACLKFLPLEDVEAIELRPDVPRLAIEYLGLDDDPRLYIRVGDALELLPTAEPADLIFVDLYTDVGPGAGHLAWNFLGD
CQKRLNPGGWLVINQWATDDGKPLGAALLRGLYHRHYWELPVKEGNVILIVPADLDQVLDMQALTARAEALAPKLGYSLQ
TLINCIRPAT

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 27878; Mature: 27747

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEERVELLLAEVQDEFGVIRVLEVADYRFLEFGDAIEQSCVFTADPSWLEYDYTRAMLI
CCHHHHHHHHHHHHHHCCEEEEEEHHCCHHHHHHHHHHHCEEEECCCCCEEHHHHHHHHH
GALCHEQPESALFLGLGAGTLTQACLKFLPLEDVEAIELRPDVPRLAIEYLGLDDDPRLY
HHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHCCCCCCCEEE
IRVGDALELLPTAEPADLIFVDLYTDVGPGAGHLAWNFLGDCQKRLNPGGWLVINQWATD
EEECCCEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC
DGKPLGAALLRGLYHRHYWELPVKEGNVILIVPADLDQVLDMQALTARAEALAPKLGYSL
CCCCHHHHHHHHHHHHHEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHH
QTLINCIRPAT
HHHHHHHCCCC
>Mature Secondary Structure 
TEERVELLLAEVQDEFGVIRVLEVADYRFLEFGDAIEQSCVFTADPSWLEYDYTRAMLI
CHHHHHHHHHHHHHHCCEEEEEEHHCCHHHHHHHHHHHCEEEECCCCCEEHHHHHHHHH
GALCHEQPESALFLGLGAGTLTQACLKFLPLEDVEAIELRPDVPRLAIEYLGLDDDPRLY
HHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHCCCCCCCEEE
IRVGDALELLPTAEPADLIFVDLYTDVGPGAGHLAWNFLGDCQKRLNPGGWLVINQWATD
EEECCCEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC
DGKPLGAALLRGLYHRHYWELPVKEGNVILIVPADLDQVLDMQALTARAEALAPKLGYSL
CCCCHHHHHHHHHHHHHEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHH
QTLINCIRPAT
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]