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The map label for this gene is ycaQ [H]

Identifier: 77460212

GI number: 77460212

Start: 4520956

End: 4522176

Strand: Reverse

Name: ycaQ [H]

Synonym: Pfl01_3991

Alternate gene names: 77460212

Gene position: 4522176-4520956 (Counterclockwise)

Preceding gene: 77460213

Following gene: 77460210

Centisome position: 70.24

GC content: 62.57

Gene sequence:

>1221_bases
ATGCCCGCGACTTTGTCCTTCCCCCTTAAACAGGCTCGACGTCTGGCACTGGCTGCCCAAGGGTTTTACGGGCGCCAGCC
GCCGGCTGTCAAGGCCATGCACCTCAACCGTCTGATCGAGCGTCTCGGCCTGTTGCAGATCGACTCCGTCAACGCCGTAG
TGCGCTCGCACTACCTGCCGCTGTTTTCCCGTCTTGGTTCCTATTCTTCCGATTTGCTCGACCAGGCTGCCTGGAGTTCG
GGGCGACGTCGTTCGCTGTTCGAATACTGGGGCCATGAAGCGTCGCTGCTGCCGTTGTCGATGTACCCGTTGATGGGCTG
GCGCATGCAGCGGGCCAGGCGCGGTGAAGACATCTATCAGCAATTGGCGCGTTTCGGTCGCGAGCAACAGGACACCATTC
GCCGGGTGCTGGCGTCGGTCGAAGAGCAGGGTGCATTGGGCGCCGGCAGCCTGTCGACCCGCCAGGAAAAGGCCGGACCG
TGGTGGGACTGGAGCGCGGAAAAACATGCGCTGGAATGGTTGTTTGCCGCTGGCGAAGTGACTGTCGCCGGGCGCCGTGG
TTTCGAGCGATTGTATGACTTGCCGGAACGGGTGATTCCGGCTTCCGTGCTGCAACAGCCATTGCCCGACGAGGCTGGGG
CGCAGCGCGGTTTGCTGCTGCATGCAGTGCAGGCACTGGGTGTCGGCACGGAAAAAGACCTGCGTGATTACTTCAGACTG
AATCCTTCCGATGCCCGCCCGCGTCTGGCCGAACTGGTCGAGGACGGGCAACTGCTGACCTGCGAAGTCGCCGGTTGGCG
CCAGATCGCTTATTGCCTGCCCGAGCCGAAAATCCCGCGCAAGGTCGAGGCCAGTGCATTGCTGTCGCCGTTCGATTCAC
TGATCTGGGAGCGCAGCCGCACCGAGCGGCTGTTCGATTTCCGTTATCGGCTGGAGATTTACACGCCGCAGGATAAACGC
GTTTTCGGCTATTACGTGTTGCCGTTCCTGCACAACGAGCGGATTGCCGCGCGGGTTGACCTGCGCGCCGAACGGGCGGC
GGGGCGACTGGCCGTGCATGCGGTGCACGAGGAAGAAACCGGACTGGATGACGCGGGGATGTTGGCGCTGGCGCTGAACC
TGCGGCGCATGGCGGACTGGTTGGGGCTTGAGCAGGTGCAGCTCAATTGTCAGCGGGAAAGTGCAGGGAGGTTGCGGATG
GCGCTGGCTCAAATTGACTGA

Upstream 100 bases:

>100_bases
GTGCGGCCGTTCTGGGACGATCCGATGCATAAATGATGAGGCCATTGCTACACAAACCACTTTCAAGTGAGGTAGGTTGC
GAGCAGACATGGAGGTACAC

Downstream 100 bases:

>100_bases
GCCCGCGCCATCGCAATTCAGCGTTTGACCTGTTTCAACGTCTCGGCAATCAAGAACGCCAGTTCCAGCGACTGATCGGC
ATTCATCCGTGGGTCGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MPATLSFPLKQARRLALAAQGFYGRQPPAVKAMHLNRLIERLGLLQIDSVNAVVRSHYLPLFSRLGSYSSDLLDQAAWSS
GRRRSLFEYWGHEASLLPLSMYPLMGWRMQRARRGEDIYQQLARFGREQQDTIRRVLASVEEQGALGAGSLSTRQEKAGP
WWDWSAEKHALEWLFAAGEVTVAGRRGFERLYDLPERVIPASVLQQPLPDEAGAQRGLLLHAVQALGVGTEKDLRDYFRL
NPSDARPRLAELVEDGQLLTCEVAGWRQIAYCLPEPKIPRKVEASALLSPFDSLIWERSRTERLFDFRYRLEIYTPQDKR
VFGYYVLPFLHNERIAARVDLRAERAAGRLAVHAVHEEETGLDDAGMLALALNLRRMADWLGLEQVQLNCQRESAGRLRM
ALAQID

Sequences:

>Translated_406_residues
MPATLSFPLKQARRLALAAQGFYGRQPPAVKAMHLNRLIERLGLLQIDSVNAVVRSHYLPLFSRLGSYSSDLLDQAAWSS
GRRRSLFEYWGHEASLLPLSMYPLMGWRMQRARRGEDIYQQLARFGREQQDTIRRVLASVEEQGALGAGSLSTRQEKAGP
WWDWSAEKHALEWLFAAGEVTVAGRRGFERLYDLPERVIPASVLQQPLPDEAGAQRGLLLHAVQALGVGTEKDLRDYFRL
NPSDARPRLAELVEDGQLLTCEVAGWRQIAYCLPEPKIPRKVEASALLSPFDSLIWERSRTERLFDFRYRLEIYTPQDKR
VFGYYVLPFLHNERIAARVDLRAERAAGRLAVHAVHEEETGLDDAGMLALALNLRRMADWLGLEQVQLNCQRESAGRLRM
ALAQID
>Mature_405_residues
PATLSFPLKQARRLALAAQGFYGRQPPAVKAMHLNRLIERLGLLQIDSVNAVVRSHYLPLFSRLGSYSSDLLDQAAWSSG
RRRSLFEYWGHEASLLPLSMYPLMGWRMQRARRGEDIYQQLARFGREQQDTIRRVLASVEEQGALGAGSLSTRQEKAGPW
WDWSAEKHALEWLFAAGEVTVAGRRGFERLYDLPERVIPASVLQQPLPDEAGAQRGLLLHAVQALGVGTEKDLRDYFRLN
PSDARPRLAELVEDGQLLTCEVAGWRQIAYCLPEPKIPRKVEASALLSPFDSLIWERSRTERLFDFRYRLEIYTPQDKRV
FGYYVLPFLHNERIAARVDLRAERAAGRLAVHAVHEEETGLDDAGMLALALNLRRMADWLGLEQVQLNCQRESAGRLRMA
LAQID

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=402, Percent_Identity=35.5721393034826, Blast_Score=204, Evalue=8e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 46184; Mature: 46053

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATLSFPLKQARRLALAAQGFYGRQPPAVKAMHLNRLIERLGLLQIDSVNAVVRSHYLP
CCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHH
LFSRLGSYSSDLLDQAAWSSGRRRSLFEYWGHEASLLPLSMYPLMGWRMQRARRGEDIYQ
HHHHHCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCHHHHH
QLARFGREQQDTIRRVLASVEEQGALGAGSLSTRQEKAGPWWDWSAEKHALEWLFAAGEV
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHCCCE
TVAGRRGFERLYDLPERVIPASVLQQPLPDEAGAQRGLLLHAVQALGVGTEKDLRDYFRL
EECCHHHHHHHHCCHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCC
NPSDARPRLAELVEDGQLLTCEVAGWRQIAYCLPEPKIPRKVEASALLSPFDSLIWERSR
CCCCCCHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TERLFDFRYRLEIYTPQDKRVFGYYVLPFLHNERIAARVDLRAERAAGRLAVHAVHEEET
HHHHHEEEEEEEEECCCCCEEEEEEEEEECCCCCEEEEECHHHHHCCCCEEEEEECCHHC
GLDDAGMLALALNLRRMADWLGLEQVQLNCQRESAGRLRMALAQID
CCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHCHHHHHHHHHCC
>Mature Secondary Structure 
PATLSFPLKQARRLALAAQGFYGRQPPAVKAMHLNRLIERLGLLQIDSVNAVVRSHYLP
CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHH
LFSRLGSYSSDLLDQAAWSSGRRRSLFEYWGHEASLLPLSMYPLMGWRMQRARRGEDIYQ
HHHHHCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCHHHHH
QLARFGREQQDTIRRVLASVEEQGALGAGSLSTRQEKAGPWWDWSAEKHALEWLFAAGEV
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHCCCE
TVAGRRGFERLYDLPERVIPASVLQQPLPDEAGAQRGLLLHAVQALGVGTEKDLRDYFRL
EECCHHHHHHHHCCHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCC
NPSDARPRLAELVEDGQLLTCEVAGWRQIAYCLPEPKIPRKVEASALLSPFDSLIWERSR
CCCCCCHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TERLFDFRYRLEIYTPQDKRVFGYYVLPFLHNERIAARVDLRAERAAGRLAVHAVHEEET
HHHHHEEEEEEEEECCCCCEEEEEEEEEECCCCCEEEEECHHHHHCCCCEEEEEECCHHC
GLDDAGMLALALNLRRMADWLGLEQVQLNCQRESAGRLRMALAQID
CCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]