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The map label for this gene is ygdR [C]

Identifier: 77460184

GI number: 77460184

Start: 4489467

End: 4489688

Strand: Direct

Name: ygdR [C]

Synonym: Pfl01_3963

Alternate gene names: 77460184

Gene position: 4489467-4489688 (Clockwise)

Preceding gene: 77460183

Following gene: 77460188

Centisome position: 69.73

GC content: 55.86

Gene sequence:

>222_bases
ATGACTCAACGGACCCTCGCCACTTTCATGCTCGCACTGGGCCTCGCCACTCTCGCCGGTTGCGCTTCGCCAACAGTGAT
CACCTTGAATGACGGTCGCGAAATCCAGGCTGTCGACGCCCCCAAGTATGATGAAGATTCGGGCTTCTACGAGTTCGAAC
AACTGGACGGCAAGCACACCCGCATCAACAAGGATCAGATCCGCACTGTCAAAGAGCTGTAA

Upstream 100 bases:

>100_bases
GCACAACACTGTGTCAGACTGACAGCATTCAAGGAACTTGCACGCCTTGTATACGTCTCAAGCTCAGTAACCAAAAGAAT
TTCCCTTCGGAGACACACTC

Downstream 100 bases:

>100_bases
GTCTTCAGTTCGACAGCGGATACAGAAAAGCCCGCAATATGCGGGCTTTTTCGTGTCTGGCAGAAAAAGGTCGATACCCG
GATCACCAGTCCAGCGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MTQRTLATFMLALGLATLAGCASPTVITLNDGREIQAVDAPKYDEDSGFYEFEQLDGKHTRINKDQIRTVKEL

Sequences:

>Translated_73_residues
MTQRTLATFMLALGLATLAGCASPTVITLNDGREIQAVDAPKYDEDSGFYEFEQLDGKHTRINKDQIRTVKEL
>Mature_72_residues
TQRTLATFMLALGLATLAGCASPTVITLNDGREIQAVDAPKYDEDSGFYEFEQLDGKHTRINKDQIRTVKEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8118; Mature: 7987

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRTLATFMLALGLATLAGCASPTVITLNDGREIQAVDAPKYDEDSGFYEFEQLDGKHT
CCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCCCEEEHHHCCCCCC
RINKDQIRTVKEL
CCCHHHHHHHHCC
>Mature Secondary Structure 
TQRTLATFMLALGLATLAGCASPTVITLNDGREIQAVDAPKYDEDSGFYEFEQLDGKHT
CHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCCCEEEHHHCCCCCC
RINKDQIRTVKEL
CCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA