| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is catD [H]
Identifier: 77460160
GI number: 77460160
Start: 4453413
End: 4454225
Strand: Reverse
Name: catD [H]
Synonym: Pfl01_3939
Alternate gene names: 77460160
Gene position: 4454225-4453413 (Counterclockwise)
Preceding gene: 77460161
Following gene: 77460156
Centisome position: 69.18
GC content: 62.61
Gene sequence:
>813_bases ATGCCTTTTTTCACGGTTGACGGACAGGCGCTTCACTACATTGATCAAGGCACGGGCCCGGCGGTGCTGTTGGCCGGCAG TTACCTGTGGGACCAGGCCATGTGGGCCCCGCAAATCGCAGCGTTGTCGGCGCACTATCGGGTGATTGCACTGGATCTGT GGGGCCACGGCGAATCCGGTCGCTTGCCTGAAGGCACCGCTTCGCTGGACGACATCGCCCGTCAGGCACTGGCCTTGCTC GATCATCTGGACATCGACCGGGTGACCCTGGTCGGGTTGTCGGTCGGCGGCATGTGGGGCGTGCGTCTGGCGTTGTCGGC GCCGCAGCGGCTCAACGGTCTGGTGCTGATGGACACTTACGTCGGCGTCGAGCCGGAGCCGACCCGCCAGTACTATTTCT CGCTGTTCAAACAGATCGAGGAAAGCGGCGGGATCTCCGAGCAACTGCTGGATATCGTGGTGCCGATCTTCTTCCGTCCG GGCATCGATCGAGCATCGGCGCTGTATCAGGACTTCCGCGCCAAACTCGCCGGCTATTCCGCCGAACGCCTGCGCGACAG CATCGTGCCGATGGGGCGCATCACCTTTGGCCGTGATGACCTGTTGCCGCGTCTGGGGGAGCTGAACGCGGCGACCACGC TGGTGGTCTGCGGCGATCAGGACAAACCACGCCCGCCCTCGGAAGCACGGGAAATGGCCGAGTTGATTGGTTGCCCGTGT GTGTTGGTGCCGGAAGCGGGGCATATCTCCAATCTGGAGAATCCAACCTTCGTGACCGACACGCTGCTGAAGTTTCTGGC TGGGCTGAAGTAA
Upstream 100 bases:
>100_bases GTTGTCGCAAATCGGGCTTTGTAATCCTTTCATATCATTGACGGCCGAGGCGCGCCCGCTCAGTCTTCGTGCTCCAGTTT CTTTGCCACGGGGGGTATCC
Downstream 100 bases:
>100_bases CGAAAACGCCCACGCATTGCGTGGGCGTTTTTTATTTCGGGCCGAGAATCTTCGCCAGCTTGTCCGGCGTCGGTGCACCT TGCTGTTGTTGCAGTTCGCC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MPFFTVDGQALHYIDQGTGPAVLLAGSYLWDQAMWAPQIAALSAHYRVIALDLWGHGESGRLPEGTASLDDIARQALALL DHLDIDRVTLVGLSVGGMWGVRLALSAPQRLNGLVLMDTYVGVEPEPTRQYYFSLFKQIEESGGISEQLLDIVVPIFFRP GIDRASALYQDFRAKLAGYSAERLRDSIVPMGRITFGRDDLLPRLGELNAATTLVVCGDQDKPRPPSEAREMAELIGCPC VLVPEAGHISNLENPTFVTDTLLKFLAGLK
Sequences:
>Translated_270_residues MPFFTVDGQALHYIDQGTGPAVLLAGSYLWDQAMWAPQIAALSAHYRVIALDLWGHGESGRLPEGTASLDDIARQALALL DHLDIDRVTLVGLSVGGMWGVRLALSAPQRLNGLVLMDTYVGVEPEPTRQYYFSLFKQIEESGGISEQLLDIVVPIFFRP GIDRASALYQDFRAKLAGYSAERLRDSIVPMGRITFGRDDLLPRLGELNAATTLVVCGDQDKPRPPSEAREMAELIGCPC VLVPEAGHISNLENPTFVTDTLLKFLAGLK >Mature_269_residues PFFTVDGQALHYIDQGTGPAVLLAGSYLWDQAMWAPQIAALSAHYRVIALDLWGHGESGRLPEGTASLDDIARQALALLD HLDIDRVTLVGLSVGGMWGVRLALSAPQRLNGLVLMDTYVGVEPEPTRQYYFSLFKQIEESGGISEQLLDIVVPIFFRPG IDRASALYQDFRAKLAGYSAERLRDSIVPMGRITFGRDDLLPRLGELNAATTLVVCGDQDKPRPPSEAREMAELIGCPCV LVPEAGHISNLENPTFVTDTLLKFLAGLK
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081721, Length=275, Percent_Identity=30.1818181818182, Blast_Score=66, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 29505; Mature: 29374
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFFTVDGQALHYIDQGTGPAVLLAGSYLWDQAMWAPQIAALSAHYRVIALDLWGHGESG CCEEECCCCEEEEEECCCCCEEEEECHHHHHHHHCCHHHHHHHCCEEEEEEEEECCCCCC RLPEGTASLDDIARQALALLDHLDIDRVTLVGLSVGGMWGVRLALSAPQRLNGLVLMDTY CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHEEECCCHHHCCEEEEEEE VGVEPEPTRQYYFSLFKQIEESGGISEQLLDIVVPIFFRPGIDRASALYQDFRAKLAGYS CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC AERLRDSIVPMGRITFGRDDLLPRLGELNAATTLVVCGDQDKPRPPSEAREMAELIGCPC HHHHHHHCCCCCEEECCHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCE VLVPEAGHISNLENPTFVTDTLLKFLAGLK EEECCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure PFFTVDGQALHYIDQGTGPAVLLAGSYLWDQAMWAPQIAALSAHYRVIALDLWGHGESG CEEECCCCEEEEEECCCCCEEEEECHHHHHHHHCCHHHHHHHCCEEEEEEEEECCCCCC RLPEGTASLDDIARQALALLDHLDIDRVTLVGLSVGGMWGVRLALSAPQRLNGLVLMDTY CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHEEECCCHHHCCEEEEEEE VGVEPEPTRQYYFSLFKQIEESGGISEQLLDIVVPIFFRPGIDRASALYQDFRAKLAGYS CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC AERLRDSIVPMGRITFGRDDLLPRLGELNAATTLVVCGDQDKPRPPSEAREMAELIGCPC HHHHHHHCCCCCEEECCHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCE VLVPEAGHISNLENPTFVTDTLLKFLAGLK EEECCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]