| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yneN [H]
Identifier: 77460158
GI number: 77460158
Start: 4451763
End: 4452635
Strand: Direct
Name: yneN [H]
Synonym: Pfl01_3937
Alternate gene names: 77460158
Gene position: 4451763-4452635 (Clockwise)
Preceding gene: 77460157
Following gene: 77460159
Centisome position: 69.14
GC content: 65.64
Gene sequence:
>873_bases ATGCTGACCTTCACCCTCGGCACCTTTGCCATCGCCCTCAACCATCTGCTGCTGATCAGCGCGCTGGCGCTGGCGACCTT CGTCGGCTGGCGGGTGGCCAAGCGCGGCGGTGACAACCCCGAGTCGGCGCTGTTCAGCCTGTTTCTGCTCGGCATGCTGG CGGCGCGCGTTGCATTTGTCGCTGTGTACTGGGGCCACTATCGCAACGATCTGTGGCAGATCATCGACCTGCGCGACGGC GGTTTTCTCGCCTGGCCGGGGGTGATCGTGCTGTTGCTGGCGGCACTGTATCGCGGCTGGCGCCGGCCGGGTTTGCGTCG ACCGCTGGGCTTCGGCGTGGTCAGCGGTGTGGCGTTCTGGGTGCTGGCGACCCTGTCGCTGAACATCTACGAGCAAGGCA CGCGCCTGCCGGACATCACTCTGCGCAACGCCGCCGGGGAAACCGTGAAACTCACCGACTACCAGGGCGGGCCGCTGGTG ATCAACCTGTGGGCCACCTGGTGTCCGCCGTGCCGCCGGGAAATGCCGGTGCTGGAAAACGCCCAGCAACAACGCCCGGA CCTGACGTTCCTGTTCGTCAACCAGGCCGAAAGCATGCAAAGCGTCGCCACGTTTCTCGAAACCCAGGGTTTGAGCCTGA ACAACGTGCTGTTCGACCGCAGCGGACGCCTCGGCCAGGCCGTGGGCTCCATGGCCCTGCCGACTACCCTGTTCTATAGC CCGGACGGTCGCCTGCTGGGCAGCCATTTGGGCGAATTGTCCAACGCCAGCCTGGCCCGTGCCCTGGAAAGCTTCGACAC CCCGGCCTCCAGCCCGAATCCGGCCACCTCTTCTTCAAGGAAACTGCCATGCCCCGCCTCCGCCACCTGCTGA
Upstream 100 bases:
>100_bases TCGGCGCCGACGGCGAAGAGCGCCGCAGCCAGCGCATCACCGGCGAGGTCGATGCCGATACTTTCCTGCAACGCTGGACC ACCACCCGAGACGCCCGTTA
Downstream 100 bases:
>100_bases CGCTGACCCTGGGCGCCGCCCTGCTGCACTTGCCGTCGGTCCAGGCCGCTGAAGAACTGCCTGAAGCGATCAAGAAGATC GAAGCCAAGGGCGCCAAGAT
Product: thiol:disulfide interchange protein DsbE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MLTFTLGTFAIALNHLLLISALALATFVGWRVAKRGGDNPESALFSLFLLGMLAARVAFVAVYWGHYRNDLWQIIDLRDG GFLAWPGVIVLLLAALYRGWRRPGLRRPLGFGVVSGVAFWVLATLSLNIYEQGTRLPDITLRNAAGETVKLTDYQGGPLV INLWATWCPPCRREMPVLENAQQQRPDLTFLFVNQAESMQSVATFLETQGLSLNNVLFDRSGRLGQAVGSMALPTTLFYS PDGRLLGSHLGELSNASLARALESFDTPASSPNPATSSSRKLPCPASATC
Sequences:
>Translated_290_residues MLTFTLGTFAIALNHLLLISALALATFVGWRVAKRGGDNPESALFSLFLLGMLAARVAFVAVYWGHYRNDLWQIIDLRDG GFLAWPGVIVLLLAALYRGWRRPGLRRPLGFGVVSGVAFWVLATLSLNIYEQGTRLPDITLRNAAGETVKLTDYQGGPLV INLWATWCPPCRREMPVLENAQQQRPDLTFLFVNQAESMQSVATFLETQGLSLNNVLFDRSGRLGQAVGSMALPTTLFYS PDGRLLGSHLGELSNASLARALESFDTPASSPNPATSSSRKLPCPASATC >Mature_290_residues MLTFTLGTFAIALNHLLLISALALATFVGWRVAKRGGDNPESALFSLFLLGMLAARVAFVAVYWGHYRNDLWQIIDLRDG GFLAWPGVIVLLLAALYRGWRRPGLRRPLGFGVVSGVAFWVLATLSLNIYEQGTRLPDITLRNAAGETVKLTDYQGGPLV INLWATWCPPCRREMPVLENAQQQRPDLTFLFVNQAESMQSVATFLETQGLSLNNVLFDRSGRLGQAVGSMALPTTLFYS PDGRLLGSHLGELSNASLARALESFDTPASSPNPATSSSRKLPCPASATC
Specific function: Involved In Disulfide Bond Formation. Catalyzes A Late, Reductive Step In The Assembly Of Periplasmic C-Type Cytochromes, Probably The Reduction Of Disulfide Bonds Of The Apocytochrome C To Allow Covalent Linkage With The Heme. Possible Subunit Of A Heme
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 31584; Mature: 31584
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTFTLGTFAIALNHLLLISALALATFVGWRVAKRGGDNPESALFSLFLLGMLAARVAFV CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AVYWGHYRNDLWQIIDLRDGGFLAWPGVIVLLLAALYRGWRRPGLRRPLGFGVVSGVAFW HHHHHHHHHHHHEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VLATLSLNIYEQGTRLPDITLRNAAGETVKLTDYQGGPLVINLWATWCPPCRREMPVLEN HHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCEEEEECCCCCCCHHCCCCHHHH AQQQRPDLTFLFVNQAESMQSVATFLETQGLSLNNVLFDRSGRLGQAVGSMALPTTLFYS HHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCEEEEEC PDGRLLGSHLGELSNASLARALESFDTPASSPNPATSSSRKLPCPASATC CCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLTFTLGTFAIALNHLLLISALALATFVGWRVAKRGGDNPESALFSLFLLGMLAARVAFV CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AVYWGHYRNDLWQIIDLRDGGFLAWPGVIVLLLAALYRGWRRPGLRRPLGFGVVSGVAFW HHHHHHHHHHHHEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VLATLSLNIYEQGTRLPDITLRNAAGETVKLTDYQGGPLVINLWATWCPPCRREMPVLEN HHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEECCCCCEEEEECCCCCCCHHCCCCHHHH AQQQRPDLTFLFVNQAESMQSVATFLETQGLSLNNVLFDRSGRLGQAVGSMALPTTLFYS HHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCEEEEEC PDGRLLGSHLGELSNASLARALESFDTPASSPNPATSSSRKLPCPASATC CCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]