| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460151
Identifier: 77460151
GI number: 77460151
Start: 4444448
End: 4445347
Strand: Direct
Name: 77460151
Synonym: Pfl01_3930
Alternate gene names: NA
Gene position: 4444448-4445347 (Clockwise)
Preceding gene: 77460150
Following gene: 77460157
Centisome position: 69.03
GC content: 65.0
Gene sequence:
>900_bases ATGGCTTTTTCATTGCGACAACTGACCCTGGCCATCGCCCTCAGCGGCGCGGTTTCGAGCCCCCTGCTGGCTGCCGAGAA ACCGTTGCGGGTGCTGGCCTCGCTGCCCATCACTTACGGTCTGGGCGAAGTCCTGCTCAAGGGCACCGACATCAGCCTCG AGCGCGCGGCGCCGGCGAATCTGCCGGGCAGCCGTCAGACTGCCTACTTCACCGGTCGCGGCGCCCCGGCGCTGAGCAAA CTGGCCTCCGGCGCCGATGCGGTGATCGGCGTGCGTTCGCTGTGGGCCGATGATCCGCTGTACCCGATCGCCCGTCGCAG CAACATCCGCATCGTCGAAGTCGACGCCGCCCGCCCGGTGGACGGCGCCCTGCCCGGCATTGCCGTGCAACCGGGGCTCA AGGTCGACGGCCTGAACAGTCAACCGTGGCTGGCGAGCAACAACATGGGGCGCATGGCCGATGTGATGGCGGCGGATCTG GTGCGCCTGGCACCGAAGGACAAACCGAAGATCGAAGCCAATCTGGCGGCGCTGAAGCAGCGCCTGCTGAAACTCAGTGC CGACAGCGAGGCGCGCCTGGCCAGTGCCGACAACCTGAGCGTCATGAGCCTGAGCGATCACTTCGGTTACCTGATCGGCA GCCTGAATCTGGAGTTGATCGGACAGGACGCGCGACCGGATGCCGAATGGACGCCGGAAGATCTGAAAAAACTGACCGCG ACCCTGAAAGACAACGACGTAGCAGTGGTGCTGCACCATCGCCAGCCGTCGGATGCGGTGAAATCGGCGATTGCCGAATC GGGCAGTCATCTGCTGGTGTTGAGCACCGATGCGGCGGATCCGGTGGCAGAGCTGGAAGGCAATGTGGATGCGCTGCTCA AGGGCCTGAGCGGCGCGTAA
Upstream 100 bases:
>100_bases TCCGTCCGGCGCCGCGATCATTCTGGTCGCCGGTATCGCCTTCGCCCTCGCCGCGATTGCCCGGGGCGTCGTCCCCAGTC TGAAAGGGAACCTTGGATAA
Downstream 100 bases:
>100_bases GCCAGTCCTCTGGACATGAAAAAACCCGCTGACTGTTTCCAGTCCAGCGGGTTTCTTTTTGGCTGATGACTTACTGGGCA GCCGCTTGCGCTTCCATCTT
Product: periplasmic solute binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MAFSLRQLTLAIALSGAVSSPLLAAEKPLRVLASLPITYGLGEVLLKGTDISLERAAPANLPGSRQTAYFTGRGAPALSK LASGADAVIGVRSLWADDPLYPIARRSNIRIVEVDAARPVDGALPGIAVQPGLKVDGLNSQPWLASNNMGRMADVMAADL VRLAPKDKPKIEANLAALKQRLLKLSADSEARLASADNLSVMSLSDHFGYLIGSLNLELIGQDARPDAEWTPEDLKKLTA TLKDNDVAVVLHHRQPSDAVKSAIAESGSHLLVLSTDAADPVAELEGNVDALLKGLSGA
Sequences:
>Translated_299_residues MAFSLRQLTLAIALSGAVSSPLLAAEKPLRVLASLPITYGLGEVLLKGTDISLERAAPANLPGSRQTAYFTGRGAPALSK LASGADAVIGVRSLWADDPLYPIARRSNIRIVEVDAARPVDGALPGIAVQPGLKVDGLNSQPWLASNNMGRMADVMAADL VRLAPKDKPKIEANLAALKQRLLKLSADSEARLASADNLSVMSLSDHFGYLIGSLNLELIGQDARPDAEWTPEDLKKLTA TLKDNDVAVVLHHRQPSDAVKSAIAESGSHLLVLSTDAADPVAELEGNVDALLKGLSGA >Mature_298_residues AFSLRQLTLAIALSGAVSSPLLAAEKPLRVLASLPITYGLGEVLLKGTDISLERAAPANLPGSRQTAYFTGRGAPALSKL ASGADAVIGVRSLWADDPLYPIARRSNIRIVEVDAARPVDGALPGIAVQPGLKVDGLNSQPWLASNNMGRMADVMAADLV RLAPKDKPKIEANLAALKQRLLKLSADSEARLASADNLSVMSLSDHFGYLIGSLNLELIGQDARPDAEWTPEDLKKLTAT LKDNDVAVVLHHRQPSDAVKSAIAESGSHLLVLSTDAADPVAELEGNVDALLKGLSGA
Specific function: Unknown
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31337; Mature: 31206
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFSLRQLTLAIALSGAVSSPLLAAEKPLRVLASLPITYGLGEVLLKGTDISLERAAPAN CCCCHHHHEEHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCHHHHEECCCCEEECCCCCC LPGSRQTAYFTGRGAPALSKLASGADAVIGVRSLWADDPLYPIARRSNIRIVEVDAARPV CCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCHHCCCCEEEEEECCCCCC DGALPGIAVQPGLKVDGLNSQPWLASNNMGRMADVMAADLVRLAPKDKPKIEANLAALKQ CCCCCCEEECCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH RLLKLSADSEARLASADNLSVMSLSDHFGYLIGSLNLELIGQDARPDAEWTPEDLKKLTA HHHHHCCCCCHHEECCCCEEEEEECHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHH TLKDNDVAVVLHHRQPSDAVKSAIAESGSHLLVLSTDAADPVAELEGNVDALLKGLSGA HHCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCHHHHHHHCCCC >Mature Secondary Structure AFSLRQLTLAIALSGAVSSPLLAAEKPLRVLASLPITYGLGEVLLKGTDISLERAAPAN CCCHHHHEEHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCHHHHEECCCCEEECCCCCC LPGSRQTAYFTGRGAPALSKLASGADAVIGVRSLWADDPLYPIARRSNIRIVEVDAARPV CCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCHHCCCCEEEEEECCCCCC DGALPGIAVQPGLKVDGLNSQPWLASNNMGRMADVMAADLVRLAPKDKPKIEANLAALKQ CCCCCCEEECCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH RLLKLSADSEARLASADNLSVMSLSDHFGYLIGSLNLELIGQDARPDAEWTPEDLKKLTA HHHHHCCCCCHHEECCCCEEEEEECHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHH TLKDNDVAVVLHHRQPSDAVKSAIAESGSHLLVLSTDAADPVAELEGNVDALLKGLSGA HHCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA