| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77460009
Identifier: 77460009
GI number: 77460009
Start: 4285417
End: 4286130
Strand: Reverse
Name: 77460009
Synonym: Pfl01_3787
Alternate gene names: NA
Gene position: 4286130-4285417 (Counterclockwise)
Preceding gene: 77460011
Following gene: 77460008
Centisome position: 66.57
GC content: 60.08
Gene sequence:
>714_bases ATGGACAATCAAGCACTCAAGGCCTTGTTCGACCAGCAGTCCGCCGTCTATGACAAACAGTGGAGCGGCATGGCGCCGCT TCGTGATGCCCTGTATTTGCTGCTGGATTCGGTGTTTGTGGGCCTGCCGGAGAATGCCCGGATACTCTGCGTTGGCGTGG GCACCGGTGTGGAAATGGCCCATCTGGCGCAGCAGTTTCCCGGCTGGCGATTCACTGCAGTCGACCCTTCGGGCGCCATG CTCGACGTGTGCCGTAAGCGAGCGAAAGAGGGTGGTTTCATTGACCGCTGCCGGTTTCACGAAGGCTACCTCGATACGCT GACGGATGAATCCGGTTACGACGGCGCGACCTGTTTTCTGGTGTCGCAGTTTTTGCTCGACCCTCAGGTGCGTATCGGCT TTTTCCATGAGATTGCCCGTCGTCTGGTGCCGGGTGGAATTCTGGCTAACGCTGATCTCGCCTCGGATACCGAATCACCG GCCTATGAAGCATTGCTGCGTCACTGGATGACGCTGATGGCATCGGCCCAGGTGCCAGTGGAGATGCTCGAGCGAGCGCG TTCGGCCTATGCCCGGGATGTGGCGATTCTGCCGGCGCCGCAGGTCGCCGGTCTGATCGAGTCGGCCGGGTTCGAGACAC CGATCCAGTTCTTTCAGGCGGGTTTGATGCATGGGTGGTTCTGCCCACGCAAGGCAGGGATTGCCGCGAATTAG
Upstream 100 bases:
>100_bases AATCGCCTGCTTCACGCGAGAGCCTTGACAGCCCTGCGATAATGAAACTTCGCCGCGATCTGCGCGGAGCATTCGATCAT GATGCAGAGGAAGGTTTTCC
Downstream 100 bases:
>100_bases AGCGCCGAAGGGATAGAGGAAAACAGCTTCGTCGGTGTTCCCGAGGAATCCATTGCTTCGTATTAATGGGAAGTATTACC ATTCGCTCCCCTTTCCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase Domain-Containing Protein; Methyltransferase; Methyltransferase Superfamily; Aspartate-Semialdehyde Dehydrogenase; Orphan Protein; Methyltransferase Domain Family
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MDNQALKALFDQQSAVYDKQWSGMAPLRDALYLLLDSVFVGLPENARILCVGVGTGVEMAHLAQQFPGWRFTAVDPSGAM LDVCRKRAKEGGFIDRCRFHEGYLDTLTDESGYDGATCFLVSQFLLDPQVRIGFFHEIARRLVPGGILANADLASDTESP AYEALLRHWMTLMASAQVPVEMLERARSAYARDVAILPAPQVAGLIESAGFETPIQFFQAGLMHGWFCPRKAGIAAN
Sequences:
>Translated_237_residues MDNQALKALFDQQSAVYDKQWSGMAPLRDALYLLLDSVFVGLPENARILCVGVGTGVEMAHLAQQFPGWRFTAVDPSGAM LDVCRKRAKEGGFIDRCRFHEGYLDTLTDESGYDGATCFLVSQFLLDPQVRIGFFHEIARRLVPGGILANADLASDTESP AYEALLRHWMTLMASAQVPVEMLERARSAYARDVAILPAPQVAGLIESAGFETPIQFFQAGLMHGWFCPRKAGIAAN >Mature_237_residues MDNQALKALFDQQSAVYDKQWSGMAPLRDALYLLLDSVFVGLPENARILCVGVGTGVEMAHLAQQFPGWRFTAVDPSGAM LDVCRKRAKEGGFIDRCRFHEGYLDTLTDESGYDGATCFLVSQFLLDPQVRIGFFHEIARRLVPGGILANADLASDTESP AYEALLRHWMTLMASAQVPVEMLERARSAYARDVAILPAPQVAGLIESAGFETPIQFFQAGLMHGWFCPRKAGIAAN
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26031; Mature: 26031
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNQALKALFDQQSAVYDKQWSGMAPLRDALYLLLDSVFVGLPENARILCVGVGTGVEMA CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHH HLAQQFPGWRFTAVDPSGAMLDVCRKRAKEGGFIDRCRFHEGYLDTLTDESGYDGATCFL HHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHCCCCCCCCHHHHH VSQFLLDPQVRIGFFHEIARRLVPGGILANADLASDTESPAYEALLRHWMTLMASAQVPV HHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCH EMLERARSAYARDVAILPAPQVAGLIESAGFETPIQFFQAGLMHGWFCPRKAGIAAN HHHHHHHHHHHHCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MDNQALKALFDQQSAVYDKQWSGMAPLRDALYLLLDSVFVGLPENARILCVGVGTGVEMA CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHH HLAQQFPGWRFTAVDPSGAMLDVCRKRAKEGGFIDRCRFHEGYLDTLTDESGYDGATCFL HHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHCCCCCCCCHHHHH VSQFLLDPQVRIGFFHEIARRLVPGGILANADLASDTESPAYEALLRHWMTLMASAQVPV HHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCH EMLERARSAYARDVAILPAPQVAGLIESAGFETPIQFFQAGLMHGWFCPRKAGIAAN HHHHHHHHHHHHCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA