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The map label for this gene is yecD [C]

Identifier: 77459786

GI number: 77459786

Start: 4034547

End: 4035080

Strand: Reverse

Name: yecD [C]

Synonym: Pfl01_3564

Alternate gene names: 77459786

Gene position: 4035080-4034547 (Counterclockwise)

Preceding gene: 77459787

Following gene: 77459785

Centisome position: 62.67

GC content: 62.92

Gene sequence:

>534_bases
ATGACCACCGCATTGCTGATCATCGATGTCCAGCGCGCCTTGTGCACAGGCGAATACGAGTGCCACGACATCAAACGGGT
GATCGATACCATCAACGGCCTCAGCGCCCGCGCGCGCCAATCGGGTGTGCCGGTGGTGCTGATCCAGCACAACGAAAAGG
ACAGTCCGTTCGCCCACGGTGCCGAGGGCTGGCAACTGGCTGACGGCCTGGCCACCGCGCCCGGCGATCTGCGCGTCGAC
AAGACCGCCAACGACTCGTTCTACCAGACCAACCTGCAGAAACTGATTCCCCGGGAAGACTTCGACCGCCTGGTGATCTG
CGGCCTGCAAACCGATTACTGCGTCAACGCCACCGTGCGTCAGGCCCACCAACTGGGCTACGACGTGGAACTGGCGGCCG
ACGCGCATTCCACCGTCGACAACGGCAACATGAGCGCCGAAGACATCATCGCCGAACACAACAAGGACTGGGCGCACCTG
ACCGGTTCCGTGGCGCGGATCGATGTGAAGCCGGCGGCCGGGATCACATTCTGA

Upstream 100 bases:

>100_bases
ACGGCGCAACACCGGGTTGTCATTGGGTTACTGAGCAGAGTAAAAAGGGGGCGGGCACACGTCCGCCCCTGTCTCAAGGA
CCGATCAAGGAAGGCTCACC

Downstream 100 bases:

>100_bases
TGCTTGCTTGCACAAGAGCCCGGTTGCTCGCGAGCAACCAGTGAAAAAACCAGAGCATCGATAGCCCGGGCCCGGCATAC
TGCCGCCGCCTCAGGAATGG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MTTALLIIDVQRALCTGEYECHDIKRVIDTINGLSARARQSGVPVVLIQHNEKDSPFAHGAEGWQLADGLATAPGDLRVD
KTANDSFYQTNLQKLIPREDFDRLVICGLQTDYCVNATVRQAHQLGYDVELAADAHSTVDNGNMSAEDIIAEHNKDWAHL
TGSVARIDVKPAAGITF

Sequences:

>Translated_177_residues
MTTALLIIDVQRALCTGEYECHDIKRVIDTINGLSARARQSGVPVVLIQHNEKDSPFAHGAEGWQLADGLATAPGDLRVD
KTANDSFYQTNLQKLIPREDFDRLVICGLQTDYCVNATVRQAHQLGYDVELAADAHSTVDNGNMSAEDIIAEHNKDWAHL
TGSVARIDVKPAAGITF
>Mature_176_residues
TTALLIIDVQRALCTGEYECHDIKRVIDTINGLSARARQSGVPVVLIQHNEKDSPFAHGAEGWQLADGLATAPGDLRVDK
TANDSFYQTNLQKLIPREDFDRLVICGLQTDYCVNATVRQAHQLGYDVELAADAHSTVDNGNMSAEDIIAEHNKDWAHLT
GSVARIDVKPAAGITF

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=180, Percent_Identity=30, Blast_Score=73, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 19327; Mature: 19196

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTALLIIDVQRALCTGEYECHDIKRVIDTINGLSARARQSGVPVVLIQHNEKDSPFAHG
CCEEEEEEEEHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCC
AEGWQLADGLATAPGDLRVDKTANDSFYQTNLQKLIPREDFDRLVICGLQTDYCVNATVR
CCCCEECCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHH
QAHQLGYDVELAADAHSTVDNGNMSAEDIIAEHNKDWAHLTGSVARIDVKPAAGITF
HHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHCCCEEEEEECCCCCCCC
>Mature Secondary Structure 
TTALLIIDVQRALCTGEYECHDIKRVIDTINGLSARARQSGVPVVLIQHNEKDSPFAHG
CEEEEEEEEHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCCCCCCC
AEGWQLADGLATAPGDLRVDKTANDSFYQTNLQKLIPREDFDRLVICGLQTDYCVNATVR
CCCCEECCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHH
QAHQLGYDVELAADAHSTVDNGNMSAEDIIAEHNKDWAHLTGSVARIDVKPAAGITF
HHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA