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The map label for this gene is ycaK [C]

Identifier: 77459756

GI number: 77459756

Start: 4012059

End: 4012643

Strand: Reverse

Name: ycaK [C]

Synonym: Pfl01_3534

Alternate gene names: 77459756

Gene position: 4012643-4012059 (Counterclockwise)

Preceding gene: 77459758

Following gene: 77459753

Centisome position: 62.32

GC content: 62.56

Gene sequence:

>585_bases
ATGCACGCATTGATTGTTGTTGATCACGATGATCCACGTTCGCTGACCCACGCGTTGGCGCAGCAGATTGCCAACGGCCT
GTCGGCAAGCGATCCCTCCAACACCTTCGAAATCGCCGACCTGCACGCCGAAGAATTCGACCCACGCTTTGGTGTGGCCG
ACTGGGCGGTGCATCACCGCGAATCCGCGCCACCGGCGGACGTGCTGGCCGAGCAGGCACGCATCGACCGCGCCGATGCG
CTGGTGCTGGTCTATCCGGTGTTCTGGTGGTCGATGCCGGCGCTGCTCAAAGGCTGGATCGACCGGGTGTTCAGCAATGG
CTGGGCGTACGATTTCGACGGCGATAAGACCCTGAAGAAGCTCGGACGACTTCGCGTGCACCTGGTTGCACTCGGCGGAG
CGGATGCGCGCACTTACGAACGCCACGGCTACGGCGCAGCGATGAAGGCACAGATCGATCACGGCATTTTCGATTACTGC
GGGGCGACGGTGACGAGCTCGGCGTTGTTGCTGGAGTCCGAGTCGAGCGATCCGGCAATGCAGTTGCAGGCGGCCCGCGA
ACTCGGACTTGGGTTGTTCCGCTGA

Upstream 100 bases:

>100_bases
TGCTTATATACCAAACGTAACTTACTGAAGGTAACTTACTAAGCGTAGCTTATCGAAAGGATAAGCCCTTGGTCAGCAAT
CACCAACCGGAGATTTCCCC

Downstream 100 bases:

>100_bases
GTGTCAGCGAGCACCCGGCCACCCGGCTTTATCCAGGGCCGCGAGCAGGGTGGCGGCATCCAGCCCCGGCACCGAATGCC
CGTTGCCTTCGGTGCTCTCG

Product: NAD(P)H dehydrogenase (quinone)

Products: NAD+; NADP+; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MHALIVVDHDDPRSLTHALAQQIANGLSASDPSNTFEIADLHAEEFDPRFGVADWAVHHRESAPPADVLAEQARIDRADA
LVLVYPVFWWSMPALLKGWIDRVFSNGWAYDFDGDKTLKKLGRLRVHLVALGGADARTYERHGYGAAMKAQIDHGIFDYC
GATVTSSALLLESESSDPAMQLQAARELGLGLFR

Sequences:

>Translated_194_residues
MHALIVVDHDDPRSLTHALAQQIANGLSASDPSNTFEIADLHAEEFDPRFGVADWAVHHRESAPPADVLAEQARIDRADA
LVLVYPVFWWSMPALLKGWIDRVFSNGWAYDFDGDKTLKKLGRLRVHLVALGGADARTYERHGYGAAMKAQIDHGIFDYC
GATVTSSALLLESESSDPAMQLQAARELGLGLFR
>Mature_194_residues
MHALIVVDHDDPRSLTHALAQQIANGLSASDPSNTFEIADLHAEEFDPRFGVADWAVHHRESAPPADVLAEQARIDRADA
LVLVYPVFWWSMPALLKGWIDRVFSNGWAYDFDGDKTLKKLGRLRVHLVALGGADARTYERHGYGAAMKAQIDHGIFDYC
GATVTSSALLLESESSDPAMQLQAARELGLGLFR

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Homo sapiens, GI156564357, Length=193, Percent_Identity=27.979274611399, Blast_Score=80, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.2

Molecular weight: Translated: 21353; Mature: 21353

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHALIVVDHDDPRSLTHALAQQIANGLSASDPSNTFEIADLHAEEFDPRFGVADWAVHHR
CCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHCCCCCCHHHHHHHCC
ESAPPADVLAEQARIDRADALVLVYPVFWWSMPALLKGWIDRVFSNGWAYDFDGDKTLKK
CCCCHHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHH
LGRLRVHLVALGGADARTYERHGYGAAMKAQIDHGIFDYCGATVTSSALLLESESSDPAM
HHHHEEEEEEECCCCCHHHHHCCCCCEEEHHHCCCHHHHHCHHHHCCEEEEECCCCCHHH
QLQAARELGLGLFR
HHHHHHHHCCCCCC
>Mature Secondary Structure
MHALIVVDHDDPRSLTHALAQQIANGLSASDPSNTFEIADLHAEEFDPRFGVADWAVHHR
CCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHCCCCCCHHHHHHHCC
ESAPPADVLAEQARIDRADALVLVYPVFWWSMPALLKGWIDRVFSNGWAYDFDGDKTLKK
CCCCHHHHHHHHHHCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHH
LGRLRVHLVALGGADARTYERHGYGAAMKAQIDHGIFDYCGATVTSSALLLESESSDPAM
HHHHEEEEEEECCCCCHHHHHCCCCCEEEHHHCCCHHHHHCHHHHCCEEEEECCCCCHHH
QLQAARELGLGLFR
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; NADPH; H+; acceptor

Specific reaction: NAD(P)H + H+ + acceptor = NAD(P)+ + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]