| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is narP [C]
Identifier: 77459753
GI number: 77459753
Start: 4008908
End: 4009681
Strand: Reverse
Name: narP [C]
Synonym: Pfl01_3531
Alternate gene names: 77459753
Gene position: 4009681-4008908 (Counterclockwise)
Preceding gene: 77459756
Following gene: 77459751
Centisome position: 62.28
GC content: 64.21
Gene sequence:
>774_bases GTGGACGCGTTGCTGCAGGAATTGCCGGTGCATCAGAGCCTGTCGCGGGTGTTCGCTACGGTCGGACAGGACGGTTTCTG GCGGGCGTTGGTCGATACGCTGCGATTGCTGGTGCCGTTGGACAATGCGCTGGTGGCGGTGATGCAGACGGGGCGGCCGC CGCAATTGCTGATCGACTTCGACAGTCAGGGCCGCGCCGACGAGCAGGAAGAACTGGCCGGTTACTGTGCCGGCATGTAC CTGCTTGATCCGTTCTACCAGGCCGCCGTCGCCGGGGTCGCCGACGGTTTGTACAGCCTCGCGTCCGTGGCTCCGGACCA GTTTCTGCACAGCGAGTACTACCAGAGTTACTTCCGTTCGGTGGTCGGCGCGGATGAGCTGCAATTTCTGGTCAACACCG ATGGCGGCGTGCTCGGCTTGTCGATGGGCCGCTCGACGGCGTTCAGTTTGCAGGAGCAGGGGCGCCTGCTCTGTGTGCGG GACTGGGTGCTGTCAGCGATGCGTCGGCATGTGCAGTTGATGCCGCCGCAAGGCGCGGTGGTCGAGGCGCCGGTCGGCGA TATTGCGGCGCTGCTCGACCGCTTCGACGCCCGTCTGACCGCGCGCGAGATCGATACGGCGCGTCTGATTCTTCAGGGCT TTTCCAGCAAGGCCATCGCCCAGCACATGAACATTTCGCCGGAGACCGTGAAGGTGCACCGGCGCAATCTCTACCACAAG CTCAACGTCACCGGGCATGGTGAGCTGTTTGCGTTGGTGCTGCGCCCGCGCTGA
Upstream 100 bases:
>100_bases CTGGCCTGTTGGCAGGCCGGTGATGAACAGGAGTGGTCAGCCTATCGGGCGGGCCGCGCCGCACCCATTCCCATCATGGG TTACTCGAAAGGGGTAGTGC
Downstream 100 bases:
>100_bases CCGGAATCAGCCGATCTGCTTGAACAGTAGCGCCTTCAGACCGCTTTCCGGGTCGATATCCGGAAACTCCGGCGGATTTT CCAGCCGCTGCTCGAAGCGC
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; Response Regulator Receiver Protein; Transcriptional Regulator LuxR Family Protein; Transcriptional Regulator; Transcriptional Regulatory Protein; GerE Familyregulatory Protein; Transcription Regulator Protein; LuxR Superfamily Regulatory Protein; Regulatory Protein LuxR
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MDALLQELPVHQSLSRVFATVGQDGFWRALVDTLRLLVPLDNALVAVMQTGRPPQLLIDFDSQGRADEQEELAGYCAGMY LLDPFYQAAVAGVADGLYSLASVAPDQFLHSEYYQSYFRSVVGADELQFLVNTDGGVLGLSMGRSTAFSLQEQGRLLCVR DWVLSAMRRHVQLMPPQGAVVEAPVGDIAALLDRFDARLTAREIDTARLILQGFSSKAIAQHMNISPETVKVHRRNLYHK LNVTGHGELFALVLRPR
Sequences:
>Translated_257_residues MDALLQELPVHQSLSRVFATVGQDGFWRALVDTLRLLVPLDNALVAVMQTGRPPQLLIDFDSQGRADEQEELAGYCAGMY LLDPFYQAAVAGVADGLYSLASVAPDQFLHSEYYQSYFRSVVGADELQFLVNTDGGVLGLSMGRSTAFSLQEQGRLLCVR DWVLSAMRRHVQLMPPQGAVVEAPVGDIAALLDRFDARLTAREIDTARLILQGFSSKAIAQHMNISPETVKVHRRNLYHK LNVTGHGELFALVLRPR >Mature_257_residues MDALLQELPVHQSLSRVFATVGQDGFWRALVDTLRLLVPLDNALVAVMQTGRPPQLLIDFDSQGRADEQEELAGYCAGMY LLDPFYQAAVAGVADGLYSLASVAPDQFLHSEYYQSYFRSVVGADELQFLVNTDGGVLGLSMGRSTAFSLQEQGRLLCVR DWVLSAMRRHVQLMPPQGAVVEAPVGDIAALLDRFDARLTAREIDTARLILQGFSSKAIAQHMNISPETVKVHRRNLYHK LNVTGHGELFALVLRPR
Specific function: This Protein Activates The Expression Of The Nitrate Reductase (Narghji) And Formate Dehydrogenase-N (Fdnghi) Operons And Represses The Transcription Of The Fumarate Reductase (Frdabcd) Operon In Response To A Nitrate/Nitrite Induction Signal Transmitted
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28410; Mature: 28410
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALLQELPVHQSLSRVFATVGQDGFWRALVDTLRLLVPLDNALVAVMQTGRPPQLLIDF CCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEE DSQGRADEQEELAGYCAGMYLLDPFYQAAVAGVADGLYSLASVAPDQFLHSEYYQSYFRS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH VVGADELQFLVNTDGGVLGLSMGRSTAFSLQEQGRLLCVRDWVLSAMRRHVQLMPPQGAV HHCCCCEEEEEECCCCEEEEECCCCHHHHHHHCCCEEEHHHHHHHHHHHHHEECCCCCCE VEAPVGDIAALLDRFDARLTAREIDTARLILQGFSSKAIAQHMNISPETVKVHRRNLYHK EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHEE LNVTGHGELFALVLRPR ECCCCCCCEEEEEECCC >Mature Secondary Structure MDALLQELPVHQSLSRVFATVGQDGFWRALVDTLRLLVPLDNALVAVMQTGRPPQLLIDF CCCHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEE DSQGRADEQEELAGYCAGMYLLDPFYQAAVAGVADGLYSLASVAPDQFLHSEYYQSYFRS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH VVGADELQFLVNTDGGVLGLSMGRSTAFSLQEQGRLLCVRDWVLSAMRRHVQLMPPQGAV HHCCCCEEEEEECCCCEEEEECCCCHHHHHHHCCCEEEHHHHHHHHHHHHHEECCCCCCE VEAPVGDIAALLDRFDARLTAREIDTARLILQGFSSKAIAQHMNISPETVKVHRRNLYHK EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHEE LNVTGHGELFALVLRPR ECCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA