| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ilvE [H]
Identifier: 77459689
GI number: 77459689
Start: 3952437
End: 3953456
Strand: Direct
Name: ilvE [H]
Synonym: Pfl01_3467
Alternate gene names: 77459689
Gene position: 3952437-3953456 (Clockwise)
Preceding gene: 77459688
Following gene: 77459692
Centisome position: 61.39
GC content: 60.49
Gene sequence:
>1020_bases ATGGGTAACGAAAGCATCAACTGGGACAAGCTGGGTTTTGACTACATCAAGACCGACAAACGCTATCTGTCGTACTTTCG CAACGGCGAGTGGGACAAAGGCACCCTGACCGAAGACAACGTGCTGCACATCAGCGAAGGCTCCACTGCCCTTCACTATG GCCAGCAATGCTTCGAAGGCCTGAAGGCCTATCGTTGCAAGGACGGCTCGATCAACCTGTTCCGTCCGGACCAGAACGCC GCGCGCATGCAACGCAGCTGCGCCCGCCTGCTGATGCCGCATGTATCCACCGAGCAGTTCATCGAAGCGTGCAAGGAAGT GGTTCGCGCCAACGAGCGCTTCATCCCGCCTTACGGCACCGGTGGCGCGCTGTACCTGCGTCCGTTCGTGATCGGCGTGG GTGACAACATCGGCGTGCGTACCGCACCTGAGTTCATCTTCTCGGTGTTCGCGATCCCGGTCGGTGCCTACTTCAAGGGC GGCCTGACCCCGCACAACTTCCAGATTTCCACCTTCGACCGCGCCGCGCCACAAGGCACCGGTGCCGCCAAGGTCGGTGG CAACTACGCGGCCAGCCTGATGCCTGGCTCCCAGGCCAAGAAAGCGCACTTCGCTGACGCCATCTACCTGGATCCGCTGA CCCACAAGAAGATCGAAGAAGTCGGTTCGGCCAACTTCTTCGGGATCACCCACGACAACAAGTTCGTGACCCCGAACTCG CCATCGGTACTGCCGGGTATCACCCGTCTGTCGCTGATCGAACTGGCCAAGTCCCGTCTGGGCCTGGAAGTGGTCGAAGG CGACGTATTCATCGACAAGCTGTCGGACTTCAAAGAGGCCGGCGCCTGCGGTACTGCGGCGGTGATCACCCCGATCGGTG GCATCAGCTACAACGACCACCTGCACGTATTCCACAGCGAAACAGAAGTCGGCCCTGTGACCCAGAAGCTCTACAAAGAG CTGACCGGCGTGCAGACCGGCGACGTCGAAGCGCCAGCCGGCTGGATCGTCAAGGTTTGA
Upstream 100 bases:
>100_bases GGCTGCGAAACCGCTCAAGAATGAAGTATTGTTGTGCCCATCCAAAAAAACGTCAGAAGCCTTGAACCGCTTCGGCGGTT GTTCAGTGATAGAGGGTGTC
Downstream 100 bases:
>100_bases TCTGACGGCCAGATGCACAAAAGCCCCCATCGAGTGATCGATGGGGGCTTTTTTATTCGCCTCGCTCGCTGGCCTTCATG GCAATCCGTTTGCCCGCACG
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MGNESINWDKLGFDYIKTDKRYLSYFRNGEWDKGTLTEDNVLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDQNA ARMQRSCARLLMPHVSTEQFIEACKEVVRANERFIPPYGTGGALYLRPFVIGVGDNIGVRTAPEFIFSVFAIPVGAYFKG GLTPHNFQISTFDRAAPQGTGAAKVGGNYAASLMPGSQAKKAHFADAIYLDPLTHKKIEEVGSANFFGITHDNKFVTPNS PSVLPGITRLSLIELAKSRLGLEVVEGDVFIDKLSDFKEAGACGTAAVITPIGGISYNDHLHVFHSETEVGPVTQKLYKE LTGVQTGDVEAPAGWIVKV
Sequences:
>Translated_339_residues MGNESINWDKLGFDYIKTDKRYLSYFRNGEWDKGTLTEDNVLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDQNA ARMQRSCARLLMPHVSTEQFIEACKEVVRANERFIPPYGTGGALYLRPFVIGVGDNIGVRTAPEFIFSVFAIPVGAYFKG GLTPHNFQISTFDRAAPQGTGAAKVGGNYAASLMPGSQAKKAHFADAIYLDPLTHKKIEEVGSANFFGITHDNKFVTPNS PSVLPGITRLSLIELAKSRLGLEVVEGDVFIDKLSDFKEAGACGTAAVITPIGGISYNDHLHVFHSETEVGPVTQKLYKE LTGVQTGDVEAPAGWIVKV >Mature_338_residues GNESINWDKLGFDYIKTDKRYLSYFRNGEWDKGTLTEDNVLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDQNAA RMQRSCARLLMPHVSTEQFIEACKEVVRANERFIPPYGTGGALYLRPFVIGVGDNIGVRTAPEFIFSVFAIPVGAYFKGG LTPHNFQISTFDRAAPQGTGAAKVGGNYAASLMPGSQAKKAHFADAIYLDPLTHKKIEEVGSANFFGITHDNKFVTPNSP SVLPGITRLSLIELAKSRLGLEVVEGDVFIDKLSDFKEAGACGTAAVITPIGGISYNDHLHVFHSETEVGPVTQKLYKEL TGVQTGDVEAPAGWIVKV
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010906, Length=316, Percent_Identity=32.2784810126582, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI296010904, Length=316, Percent_Identity=32.2784810126582, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI38176287, Length=316, Percent_Identity=32.2784810126582, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI50658084, Length=334, Percent_Identity=31.7365269461078, Blast_Score=148, Evalue=7e-36, Organism=Homo sapiens, GI258614015, Length=287, Percent_Identity=33.4494773519164, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI296010902, Length=316, Percent_Identity=26.5822784810127, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI296010900, Length=316, Percent_Identity=26.5822784810127, Blast_Score=99, Evalue=8e-21, Organism=Escherichia coli, GI48994963, Length=319, Percent_Identity=33.5423197492163, Blast_Score=136, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17568601, Length=315, Percent_Identity=33.015873015873, Blast_Score=159, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17565728, Length=305, Percent_Identity=29.5081967213115, Blast_Score=106, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6322002, Length=308, Percent_Identity=32.7922077922078, Blast_Score=158, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6322608, Length=336, Percent_Identity=29.7619047619048, Blast_Score=150, Evalue=4e-37, Organism=Drosophila melanogaster, GI24641779, Length=349, Percent_Identity=29.7994269340974, Blast_Score=150, Evalue=1e-36,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 37028; Mature: 36897
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNESINWDKLGFDYIKTDKRYLSYFRNGEWDKGTLTEDNVLHISEGSTALHYGQQCFEG CCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH LKAYRCKDGSINLFRPDQNAARMQRSCARLLMPHVSTEQFIEACKEVVRANERFIPPYGT HHHEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCC GGALYLRPFVIGVGDNIGVRTAPEFIFSVFAIPVGAYFKGGLTPHNFQISTFDRAAPQGT CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC GAAKVGGNYAASLMPGSQAKKAHFADAIYLDPLTHKKIEEVGSANFFGITHDNKFVTPNS CCEECCCCEEEECCCCCCCCHHHHCCEEEECCCCHHHHHHHCCCCEEEEECCCEEECCCC PSVLPGITRLSLIELAKSRLGLEVVEGDVFIDKLSDFKEAGACGTAAVITPIGGISYNDH CCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC LHVFHSETEVGPVTQKLYKELTGVQTGDVEAPAGWIVKV EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEC >Mature Secondary Structure GNESINWDKLGFDYIKTDKRYLSYFRNGEWDKGTLTEDNVLHISEGSTALHYGQQCFEG CCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH LKAYRCKDGSINLFRPDQNAARMQRSCARLLMPHVSTEQFIEACKEVVRANERFIPPYGT HHHEECCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCC GGALYLRPFVIGVGDNIGVRTAPEFIFSVFAIPVGAYFKGGLTPHNFQISTFDRAAPQGT CCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCC GAAKVGGNYAASLMPGSQAKKAHFADAIYLDPLTHKKIEEVGSANFFGITHDNKFVTPNS CCEECCCCEEEECCCCCCCCHHHHCCEEEECCCCHHHHHHHCCCCEEEEECCCEEECCCC PSVLPGITRLSLIELAKSRLGLEVVEGDVFIDKLSDFKEAGACGTAAVITPIGGISYNDH CCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC LHVFHSETEVGPVTQKLYKELTGVQTGDVEAPAGWIVKV EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]