| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77459651
Identifier: 77459651
GI number: 77459651
Start: 3910169
End: 3911074
Strand: Direct
Name: 77459651
Synonym: Pfl01_3429
Alternate gene names: NA
Gene position: 3910169-3911074 (Clockwise)
Preceding gene: 77459650
Following gene: 77459652
Centisome position: 60.73
GC content: 62.03
Gene sequence:
>906_bases ATGATCATTGACACCCATCTGCACCCCACCAATCTGGTCGACGAGGCCTGGCGCCACACCGGCGAACCGTTCACCGGCGA GCGCATGCTCAAGCTGATGGACGGCCCGTACATGATCAACGGCAAGCCGCGCCGGATCGACATGGGCTTCATCCAGCCGC CACCGGGCAACACCGGTTATCGCGACGGCAACCGCCGTGGTCGCGAGGGCGTGCGTGACTACATGTCGTATGTCGCCGAA CTGTGTGTGAAGTACCCGGACCGGTTCATCGGCAACTTCAACTTCAACCCGCGCTGGGGACCGGAAAACGGCGCGGCAGA GCTGGAGTTCCACATCAAGGAATACGGCTTCAAGATGCTCAAGCTGCACGCCAACATGCACGGCTATCGCCCGGACCGGG CGCTGGACTGGCTGCGTCCGGCGATGAAAGTCTGCGCCAAGTACAACATCGTGGTGCTGATCCACACCGGCGACGGCCCG TACACCATTCCGACGATGTTCTACCCGATCATCCGCGAGTTCCCGATGGTCAATTTCATCATCGGTCACTTCGGCATCCA GACCGGCGGCAACTACTCGTTCGAGGCGTTCTGGATGGCGATGGACACGCCGAACGTGTACTGCGAATCCGGCTGGTGCT TCCAGTCGCGAATCGTCGAGTTCGCCAAGGAGCTGCCGCGCAACAAGATCGTGTTCGGCACCGACTCGCCGCCGAACGAA CCGGGCATGTGGCTGCGCGAGCTGGAGGTGTTGTGCTCGCCGGCGCCGCAGGGCCTGGGGATTGACGAGGATCACCTTGA GGATTACCTGGGCAACAACATCGCCCGGTTGTGCGGGATCGAACCGACCCCGCCGCCCAAGGATCTGGCCGAGGCGGACA TTCGTCTGACCACGACCTATCTCTAA
Upstream 100 bases:
>100_bases ATGATCGGCCTTCAGCCGTCCCCGCCGCCGCGTTCCGTTTCCGAAGCAGAGGCGCAACTCAAGCGCCCCGTCACCACTCA ACTGGCCAGGAGCTGAACCG
Downstream 100 bases:
>100_bases ACAGGGTCTGACCCGGCTTCAACCCAGCCACACAGCGACTTTACAGGCGCGAAGATGACCCGGCGTTCGCTCGACCGGCA GGCCAACGGCTTGTCGATCG
Product: amidohydrolase 2
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MIIDTHLHPTNLVDEAWRHTGEPFTGERMLKLMDGPYMINGKPRRIDMGFIQPPPGNTGYRDGNRRGREGVRDYMSYVAE LCVKYPDRFIGNFNFNPRWGPENGAAELEFHIKEYGFKMLKLHANMHGYRPDRALDWLRPAMKVCAKYNIVVLIHTGDGP YTIPTMFYPIIREFPMVNFIIGHFGIQTGGNYSFEAFWMAMDTPNVYCESGWCFQSRIVEFAKELPRNKIVFGTDSPPNE PGMWLRELEVLCSPAPQGLGIDEDHLEDYLGNNIARLCGIEPTPPPKDLAEADIRLTTTYL
Sequences:
>Translated_301_residues MIIDTHLHPTNLVDEAWRHTGEPFTGERMLKLMDGPYMINGKPRRIDMGFIQPPPGNTGYRDGNRRGREGVRDYMSYVAE LCVKYPDRFIGNFNFNPRWGPENGAAELEFHIKEYGFKMLKLHANMHGYRPDRALDWLRPAMKVCAKYNIVVLIHTGDGP YTIPTMFYPIIREFPMVNFIIGHFGIQTGGNYSFEAFWMAMDTPNVYCESGWCFQSRIVEFAKELPRNKIVFGTDSPPNE PGMWLRELEVLCSPAPQGLGIDEDHLEDYLGNNIARLCGIEPTPPPKDLAEADIRLTTTYL >Mature_301_residues MIIDTHLHPTNLVDEAWRHTGEPFTGERMLKLMDGPYMINGKPRRIDMGFIQPPPGNTGYRDGNRRGREGVRDYMSYVAE LCVKYPDRFIGNFNFNPRWGPENGAAELEFHIKEYGFKMLKLHANMHGYRPDRALDWLRPAMKVCAKYNIVVLIHTGDGP YTIPTMFYPIIREFPMVNFIIGHFGIQTGGNYSFEAFWMAMDTPNVYCESGWCFQSRIVEFAKELPRNKIVFGTDSPPNE PGMWLRELEVLCSPAPQGLGIDEDHLEDYLGNNIARLCGIEPTPPPKDLAEADIRLTTTYL
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34499; Mature: 34499
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIDTHLHPTNLVDEAWRHTGEPFTGERMLKLMDGPYMINGKPRRIDMGFIQPPPGNTGY CEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCEEEECEECCCCCCCCC RDGNRRGREGVRDYMSYVAELCVKYPDRFIGNFNFNPRWGPENGAAELEFHIKEYGFKML CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCEEEEEEHHHHCEEEE KLHANMHGYRPDRALDWLRPAMKVCAKYNIVVLIHTGDGPYTIPTMFYPIIREFPMVNFI EEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHHHHCCHHHHH IGHFGIQTGGNYSFEAFWMAMDTPNVYCESGWCFQSRIVEFAKELPRNKIVFGTDSPPNE HHHHCCCCCCCCCEEEEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCC PGMWLRELEVLCSPAPQGLGIDEDHLEDYLGNNIARLCGIEPTPPPKDLAEADIRLTTTY CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCHHHHHCCEEEEEEC L C >Mature Secondary Structure MIIDTHLHPTNLVDEAWRHTGEPFTGERMLKLMDGPYMINGKPRRIDMGFIQPPPGNTGY CEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCEEEECEECCCCCCCCC RDGNRRGREGVRDYMSYVAELCVKYPDRFIGNFNFNPRWGPENGAAELEFHIKEYGFKML CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCEEEEEEHHHHCEEEE KLHANMHGYRPDRALDWLRPAMKVCAKYNIVVLIHTGDGPYTIPTMFYPIIREFPMVNFI EEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHHHHCCHHHHH IGHFGIQTGGNYSFEAFWMAMDTPNVYCESGWCFQSRIVEFAKELPRNKIVFGTDSPPNE HHHHCCCCCCCCCEEEEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCC PGMWLRELEVLCSPAPQGLGIDEDHLEDYLGNNIARLCGIEPTPPPKDLAEADIRLTTTY CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCCCCCHHHHHCCEEEEEEC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA